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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100037g15.10718.mrna |
| Orig protein id | gnl|cribi|Naga_100037g15.10718 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:1043619..1044358 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5048 ID=rna5048|Name=rna5048|organism=Nannochloropsis gaditana|type=mRNA|length=945bp
ATGAGCCGATCTTCCTCCTCGTCTTTTTTAACCCTCGTCGCTTGTCTCGT
GCTTTCCAGCTACAGCGCATCTGCCTTCATGTTACCGCGAATTTCCTCTT
TAGCCTTCCAGCGCGTGGGACCCTCGGTTGCGCGTGCACCCGCCCATGCC
GCAGGCCGTCGTATGATGCTTTCCCGTGGCCTGGCAATGGCGGCCAACCC
TCAGGTGTATTTCGACGTTGAAATCGGGGGCGAGAAAGCTGGTCGTATTA
CCATGGAGCTCGCGGCGGACGTGGCTCCCAAAACTGCGGAAAATTTCCGG
CAGATCGCCACCGGTGAGGCTGGTTTCACGTACAAGGGGTCTGCCTTCCA
CCGAATCATCCCGGACTTCATGCTCCAAGGTGGAGACATCACCCGAGGAG
ATGGCACTGGTGGCCAGTCTATCTACGGCCGAACCTTCCCGGACGAGAAC
TTTACGCTCAAACACAAGGGCGTCGGGCTCCTGTCCATGGCCAACGCCGG
GCCCAACACGAACGGCTCCCAGTTCTTCATCACCACCGTCGAGACTCCTT
GGCTGGATGGCCGGCACACGGTCTTCGGGCGGGTCACGGAGGGCATGGAC
GTGGTGCGGAAGGTGGAGGCGGTGGGGTCCCCACGGGGAACGCCGAGCAA
GAAAGTGGTGATCGTGGACTCAGGAGAGCTCAAAACTAGTGTCGGTGGAA
GAAGCGGATCTAGAAAAGGAAAGTGGAGGGTGGCGCGTCACTTGCACTGC
ATCGACAATGTGATGGACGCGAAGCTTTACCTCACTCATGTGCGGAGCAA
TAAGGGACACAATAAGGGACACAATCATTCCAAAATCTTCGACAGGAATG
AATTCTGTCAGAATAATCCGGCACGCTCTCAAGCGGTGCGAGGTCTTGGT
TCTTCATTCCTTTATTTCGTTAGCAGCCTATTTGCCTCCATGTAA back to topprotein sequence of rna5048 >rna5048-protein ID=rna5048-protein|Name=rna5048|organism=Nannochloropsis gaditana|type=polypeptide|length=178bp
MCIPFFQAKILVPFNGVLNRADSNQGYFRAKCGYSERDIHRLHNMQALSS
PRKKQGRFRPVGDLAQHCILLLAYGRIKSYKSNLVERGILAKHVSKIATE
KLRMNGPAIHFRETFRQASIAGLHCENHVVVQAQILKVASLYTYWRAMKQ
IGPQELFFACFATAPFATVHLLSVHQPL back to topmRNA from alignment at CM002464.1:1043619..1044358+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5048 ID=rna5048|Name=rna5048|organism=Nannochloropsis gaditana|type=mRNA|length=740bp|location=Sequence derived from alignment at CM002464.1:1043619..1044358+ (Nannochloropsis gaditana)
ATGTGTATTCCTTTCTTTCAGGCCAAAATTTTGGTTCCCTTCAATGGCGT
GCTGAACAGAGCAGACAGTAACCAAGGGTATTTTCGCGCTAAATGTGGAT
ATTCGGAACGAGATATTCATCGGCTTCACAATATGCAAGCTCTATCATCA
CCAAGAAAAAAACAAGGACGCTTTAGGCCAGTTGTGAGCCACAACATTTA
AAGTTCATGGCATCACCTGATGCGTTACCAGGAGGTTATATGATTGGAAA
GTCGGTTTAAGGGAGATTTGGCGCAGCATTGTATTCTGCTACTTGCCTAC
GGACGCATAAAATCTTATAAGTGAAGAAAACGGGCACAGCTTATGCAGAA
AATGTTGCACACGGTTCCCGCACGCATGCATGGATAGTTTAGAGGTCTAA
TTtggtggaaagggggatCCTTGCTAAACATGTCTCCAAGATAGCAACAG
AGAAGCTTCGAATGAATGGTCCTGCCATCCACTTTCGCGAAACATTCAGA
CAAGCCTCGATTGCTGGGCTTCATTGTGGTCGAGTAACAGACTACAAAGC
ACTTTGATATTATCACACCACACCTTCAGAAAATCACGTAGTTGTGCAAG
CGCAGATATTGAAAGTGGCTTCGCTGTACACATATTGGAGAGCCATGAAA
CAAATAGGGCCTCAAGAATTATTTTTCGCATGTTTTGCGACTGCACCTTT
TGCTACTGTGCATTTGCTTTCTGTACATCAACCACTTTGA back to topCoding sequence (CDS) from alignment at CM002464.1:1043619..1044358+ >rna5048 ID=rna5048|Name=rna5048|organism=Nannochloropsis gaditana|type=CDS|length=2148bp|location=Sequence derived from alignment at CM002464.1:1043619..1044358+ (Nannochloropsis gaditana)
ATGTGTATTCCTTTCTTTCAGGCCAAAATTTTGGTTCCCTTCAATGGCGT
GCTGAACAGAGCAGACAGTAACCAAGGGTATTTTCGCGCTAAATGTGGAT
ATTCGGAACGAGATATTCATCGGCTTCACAATATGCAAGCTCTATCATCA
CCAAGAAAAAAACAAGGACGCTTTAGGCCAGTTGGAGATTTGGCGCAGCA
TTGTATTCTGCTACTTGCCTACGGACGCATAAAATCTTATAAGTCTAATT
tggtggaaagggggatCCTTGCTAAACATGTCTCCAAGATAGCAACAGAG
AAGCTTCGAATGAATGGTCCTGCCATCCACTTTCGCGAAACATTCAGACA
AGCCTCGATTGCTGGGCTTCATTGTGAAAATCACGTAGTTGTGCAAGCGC
AGATATTGAAAGTGGCTTCGCTGTACACATATTGGAGAGCCATGAAACAA
ATAGGGCCTCAAGAATTATTTTTCGCATGTTTTGCGACTGCACCTTTTGC
TACTGTGCATTTGCTTTCTGTACATCAACCACTTTGAATGTGTATTCCTT
TCTTTCAGGCCAAAATTTTGGTTCCCTTCAATGGCGTGCTGAACAGAGCA
GACAGTAACCAAGGGTATTTTCGCGCTAAATGTGGATATTCGGAACGAGA
TATTCATCGGCTTCACAATATGCAAGCTCTATCATCACCAAGAAAAAAAC
AAGGACGCTTTAGGCCAGTTGGAGATTTGGCGCAGCATTGTATTCTGCTA
CTTGCCTACGGACGCATAAAATCTTATAAGTCTAATTtggtggaaagggg
gatCCTTGCTAAACATGTCTCCAAGATAGCAACAGAGAAGCTTCGAATGA
ATGGTCCTGCCATCCACTTTCGCGAAACATTCAGACAAGCCTCGATTGCT
GGGCTTCATTGTGAAAATCACGTAGTTGTGCAAGCGCAGATATTGAAAGT
GGCTTCGCTGTACACATATTGGAGAGCCATGAAACAAATAGGGCCTCAAG
AATTATTTTTCGCATGTTTTGCGACTGCACCTTTTGCTACTGTGCATTTG
CTTTCTGTACATCAACCACTTTGAATGTGTATTCCTTTCTTTCAGGCCAA
AATTTTGGTTCCCTTCAATGGCGTGCTGAACAGAGCAGACAGTAACCAAG
GGTATTTTCGCGCTAAATGTGGATATTCGGAACGAGATATTCATCGGCTT
CACAATATGCAAGCTCTATCATCACCAAGAAAAAAACAAGGACGCTTTAG
GCCAGTTGGAGATTTGGCGCAGCATTGTATTCTGCTACTTGCCTACGGAC
GCATAAAATCTTATAAGTCTAATTtggtggaaagggggatCCTTGCTAAA
CATGTCTCCAAGATAGCAACAGAGAAGCTTCGAATGAATGGTCCTGCCAT
CCACTTTCGCGAAACATTCAGACAAGCCTCGATTGCTGGGCTTCATTGTG
AAAATCACGTAGTTGTGCAAGCGCAGATATTGAAAGTGGCTTCGCTGTAC
ACATATTGGAGAGCCATGAAACAAATAGGGCCTCAAGAATTATTTTTCGC
ATGTTTTGCGACTGCACCTTTTGCTACTGTGCATTTGCTTTCTGTACATC
AACCACTTTGAATGTGTATTCCTTTCTTTCAGGCCAAAATTTTGGTTCCC
TTCAATGGCGTGCTGAACAGAGCAGACAGTAACCAAGGGTATTTTCGCGC
TAAATGTGGATATTCGGAACGAGATATTCATCGGCTTCACAATATGCAAG
CTCTATCATCACCAAGAAAAAAACAAGGACGCTTTAGGCCAGTTGGAGAT
TTGGCGCAGCATTGTATTCTGCTACTTGCCTACGGACGCATAAAATCTTA
TAAGTCTAATTtggtggaaagggggatCCTTGCTAAACATGTCTCCAAGA
TAGCAACAGAGAAGCTTCGAATGAATGGTCCTGCCATCCACTTTCGCGAA
ACATTCAGACAAGCCTCGATTGCTGGGCTTCATTGTGAAAATCACGTAGT
TGTGCAAGCGCAGATATTGAAAGTGGCTTCGCTGTACACATATTGGAGAG
CCATGAAACAAATAGGGCCTCAAGAATTATTTTTCGCATGTTTTGCGACT
GCACCTTTTGCTACTGTGCATTTGCTTTCTGTACATCAACCACTTTGA back to top
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