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Properties
| Property Name | Value |
| Product | coatomer copii |
| Orig transcript id | gnl|cribi|Naga_100037g10.10729.mrna |
| Orig protein id | gnl|cribi|Naga_100037g10.10729 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002464.1 | supercontig | CM002464.1:1028405..1033157 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5042 ID=rna5042|Name=rna5042|organism=Nannochloropsis gaditana|type=mRNA|length=1808bp TAGGCGCGTGGGTACCTCGGGTGAGGACAATGCTGAGATGTACCGTGTTA AGTCCATTTTGGGGCCCAGGGCCCTCGGATCAACCGGGGAGAGAGATGAT ATCATACTGTCCGCTTTGTCGCGGGACTGATTGCCTCGCAGCCGCCTTTC ATCCTGAGCGGAGTACTCACAAATCGCCGTCCAACTCCACGATGATGCAT TGAAACCACCCACACTCTGCTCACAGGCGCTTGAAAAGAGCGGGAAGACC CAGGAAACTCAAACGAGACTGGGTCGCAGCCATAGAAATCCTTTTTGATA CTCAAAGAAGCAAGGCACCATTCAGCATCTAGCCTCTTTTCTCACGCGGC GCCCGACAAGCAGCGCCACCTCTTCCAACGAAGAGCAGCAGGCACCTGCA CCGGCACCAGCTCCCTCCGGATCAGACACAGGAGGTGGTCAATCCCAAGC GGCGCAAGGGAGGGAAGGCGGGGGGGAAGGGGGAGGACAAGGGGGGGAGG ACAAGGGGAAGCCGCAACAACGCTTTGGCATGAATGGAGGCCCGCAAAGC AGCGCCGAAGAAAAAGGCGAAATTCCGGGAGTAGGACCCACCAGACACAT TTATACTGGGCAAGATGGGAAGCGTATGGAGATAAGGGAGGTTTGGCTGG AGAACCTCGACAAAGAGATGGTGGCTGTTCGCGAAGTGGTGGAGCAATAC CCGTACGTGGCGATGGACACCGAGTTCCCGGGCGTGGTGGCGCGACCGGT GGGGGACGTATCAGCGTCAGACTACCAGTACAAGACGCTCAAGTGCAATG TGGACCTGCTTAAGATCATCCAGCTCGGACTTTCCTTCGCCGACTCGGAC GGCAACAGCCCCCCGGAGTGCCCTACCTGGCAATTTAACTTCCGTTTCTC CCTATCCGACGACATCTACGCGGAGGACTCGATTGAGCTTCTTAAGCAGA GCGGGATCGACTTCTCGAAGCACGAGTCCCACGGTATCGATGTCTTCCGC TTTGGCGAGCTCCTCATGACCAGCGGCTTGGTGCTGATGGACGAGGTGCG GTGGATCTCGTTCCACTCCGGGTATGATTTCGGATACCTGCTCAAGGTCT TGACCTGCGCTGCCTTGCCCTCGGACGAGAACGGGTTTTTTGACCTCCTG CGTACCTATTTCCCGTGCTTCTACGACATCAAGTATCTGATGACGGCCTG CCAGGGGCTCCATGGCGGCTTGCAAAGAATCGCCGAAGAGCTCTCAGTGG CCCGCGTGGGGCCCATGCACCAAGCAGGCAGTGACTCCCTCCTGACGGCT CAAACCTTTTTCCGTCTCTGCGCAGTATCTTTCGATGGCCTCAACAATCT CAGCGATGAGAAATTCAAGGGAGAGCTCTTCGGACTGGGTCATAACCACA CGGTCTACCGGAGCAAAATGCAGAATACCAATCGCCATGGCCACGGAGGT CTTGAGAGACAGCGGGAAGTCCCCCCTCTTACCGACAGGGGCGACAGTGT AAGCACTCCCCAGTCTATCAGCTCAACATCAGGACCGCGACGCCTAGGTA CAGAAGCTGCTGCTACCTCGCCTTCTGCTGGAACCGGGACAGGGGGCAAT GGGGACGCAAATGCGATGTCCGACTAAGATATGATTTCCTACGAATTCTT GTTTCCAGAAAATGTGCAAACAAAAGGCGTATGTACAGAATGAGAGGAGA GATTTGGAAAGAAATACTCGGAGGAAAGCGATTTGAAAGCAGCGCTAGAG CCGCCAAAGAAAGGACTCCTCGTCATTCTGCCTGCAACACTCACAAATAT TGCTGCTC back to topprotein sequence of rna5042 >rna5042-protein ID=rna5042-protein|Name=rna5042|organism=Nannochloropsis gaditana|type=polypeptide|length=898bp MGLRPPHQPPPPPTHPPSPYSQPSHAQQHPDLAGPQGGSGPAGYPGHYRP PSMDYTGAPHPQGMGPSPVPGMEAANQLPMLSEVDLSIASDPRFMRFTVS KIPNSQNNAAATKLPLGVVIQPMALDASGQDSIDVVNFGATGIVRCKKCR TYINPFVSWHDAGRRWRCNVCGTLNDVSSSYFNHLDEHGQRRDKHERPEL SNGSVELVAPGEYMVRPPQPPVYLFVVDVSYSSVASGLLARTVETIKKNL DALPGDPRTQFGLVTFDSTVHFYHFKPSLKMPQVLVVPDISELFLPLPED MLVNLKESREVIDLLLESLPEMYEKTRNMDSALGPALTGAYRVMAPVGGK MCVVLASMPTLGDGRLKPREELRALGTEREHAMLNPEESWYRTKAVEFSR VQISVDLFCVAPAGQQTPFMDLASLTALSKFTGGNLFYYPGFAMEKDGRK LEEEMGRILTRPTGFEAVMRVRATRGLKVTQFYGNYYIRGTDLLALPNCS SESVFGVEMAHDEAFLTASVICVQAALLHTTSSGERRIRVHTVAAPVTAV LQEVIASVDVDTLCNLMAKRMLEVALKTGLDAARHRLTQLCADLLRSCRA FSTHQPQGRASGYQQQQQQQPAGIPSTLELLPLYTMAMTKNVAFRGGTDI RPDLRTYMMQLFSVMNVATSRAFIHPNLFALHTMGNEAGLPVPPSKDSST DEAPTAGRQKIRLPVAVNLSGERFVSEGIYLLENGISLYLWVGARADPRQ LAALFGGMTSVEGADGGVLAQLFEEGKEEGDYARRVHAIVQALREERSLR WLQVQVVKEGDAGLEASSLYRNLVEDRAAFSGGQYNYAEFMGMVSRGGGG GMPGGMGGGGTRGGWRDGRRTSAWNGIPSTLKCYEMTIEEIKGSQGKE back to topmRNA from alignment at CM002464.1:1028405..1033157+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5042 ID=rna5042|Name=rna5042|organism=Nannochloropsis gaditana|type=mRNA|length=4753bp|location=Sequence derived from alignment at CM002464.1:1028405..1033157+ (Nannochloropsis gaditana) GTGGTGACCTCCCTGGCttttgcctcccgccctctcgtcttctcctgaag
gcgaggagaagaagagaggagaagtCCAAGAGCACTCAAGCTCCTTGCAA
GACGCCACGGCGGCCACTTTTCCGCCCGAATTTGAGGTGTGCATGGATGT
GGGTAGCGTGGAGGGTTTGGACCCGCCGCGCGGCGGTGTATTGCGGAAAG
ATTGGCTTTGATTCGCATCCTTTGACCTTGGTGGGGCCTCCGTTTCAAAC
GCCTTCCTCTTTAGCGACATGGAAAAGTGTTGTTCTATACCTTGGGGGTC
AAAGCCAAGCGCTCTCATTTGAAGGTTCTTACGGAGTCGACAAAGGTAAA
ATAGATTCCTATGAAGTGGCTGTAATCAGGTAATGCATGTTGCCGGACTT
TCGTACGTTTGTGAGCTTGGGCTCCCATTCCCGTCATCTGATGACCCTGC
GAGAAACCGCTCCACTCGTCGTGAGCCCACGGTCAATGCTATGCTAATGA
CCTTGAACTTGATGaatctctttcccccctacACGACGGCTCTACCATGT
TCAAAGCACAGGCAAGTGACATGTCTcaaccgccccctcctccttacgGG
GCTCCCCGGGGACCGCCCATGAATGGCATGCCGCCACAGCAGCCCtttca
gcagcagcccccccctccacgcccctctgGCCCGGCACCAGGCTACCCTG
CGTCATCACAACACTATCAAAGCCCTTATCAGCAatcgccgcagcagcag
cagccgccgccgcaccAGCAACAACCTCTGGGTCCTGGCACGTACGGGCG
CCCTCAACCTCTCGGTCCCCGCTCGGCTGCCGTCGGCGGCCCCCAAAACG
cggctcccccccgacccggACCAGGCGCACCTTACACCATGATGCAGCCT
CCAAGGGGcgggcctcctcttccgcacatgccgccaccttcccccgGGCC
CGCGGCGGCGGGTGGGATGCTGAAAGGCACCCCCGCTGTTCCTCCCAGCC
ACGGCCTTCAACAAGCGCAGTACCAGCCATCGAAAGGGCCAGTCGGACCG
CCCAAAGTCCCCGGCACCCCGCCACCCGTGTACGGTCAGTCCatgccccc
tccacccccggccCGCGGACCCCACGGGCtggcccctccatcctcctctc
cgcgcCTCTCCGCGCCGGGagggccccctcccccaatgCGCCCGCACTCG
GCCGTGCagggcatggggagggggccgcccatgcccccctcccccctttc
gcAGCCTACCACGCATGCCcctcagcccccccccccgcggccGGCAGCTT
CCTTCTACAAGGATCCTGGCaccggccccctcccagggcggggagttccc
ccccctcccatgtcTGCGGGTGGTCCGTCCCCAGTCATGAACATGATGCA
GCCgccgcagcaacaacaacaagcACCGCCACAACAcccacccccgccac
cgggggggggggccgggagTGCAACAGCTGACGGGTCAATTCTCGCAGAT
GGGCTTGCGTCCGCCccaccaacctccccccccgccgacgcACCCACCGT
CCCCCTACTCCCAACCCTCCCACGCCCAACAACATCCAGACTTGGCGGGA
CCCCAAGGAGGGTCGGGCCCAGCGGGCTACCCGGGGCACTACCGACCTCC
CTCGATGGACTACACGGGCGCGCCCCACCCCCAAGGGATGGGGCCGAGCC
CCGTGCCCGGCATGGAGGCTGCCAACCAGCTACCCATGCTCTCGGAGGTG
GATCTCTCCATCGCGTCCGACCCGCGCTTCATGCGTTTCACCGTCAGCAA
GATCCCGAACTCGCAGAACAACGCGGCGGCCACCAAACTCCCGCTGGGTG
TGGTGATCCAGCCCATGGCCCTGGACGCCTCGGGTCAGGACTCCATCGAC
GTGGTCAATTTCGGGGCCACGGGCATTGTACGCTGCAAAAAGTGTCGGAC
CTACATCAATCCTTTCGTGTCGTGGCACGACGCGGGCCGGCGCTGGCGGT
GCAACGTCTGTGGGACTCTGAACGACGTGTCGTCCTCTTACTTCAACCAC
CTGGATGAACACGGGCAACGACGGGACAAGCACGAGCGACCGGAGCTTTC
GAATGGGTCTGTGGAACTGGTGGCGCCGGGAGAATACATGGTGCGCCCGC
CTCAGCCCCCGGTGTACCTCTTCGTCGTGGACGTGTCCTATTCCTCCGTG
GCGAGTGGGCTGTTGGCTCGCACTGTCGAGACCATCAAGAAAAACTTAGA
CGCCTTGCCCGGTGACCCCCGCACGCAATTCGGCCTGGTCACCTTCGATT
CTACAGTACATTTCTACCACTTCAAGCCTTCCTTGAAGATGCCTCAAGTG
CTGGTCGTTCCCGACATCTCGGagctcttcctgcccctgccgGAAGATAT
GCTGGTTAATCTGAAGGAGAGCCGGGAGGTGATTGATCTGTTGTTGGAAA
GTCTGCCTGAGATGTACGAAAAGACGCGAAACATGGATTCGGCGTTGGGC
CCCGCCCTAACAGGGGCCTATCGGGTCATGGCCcccgtgggagggaagat
gtgCGTGGTCTTGGCCAGCATGCCCACCCTGGGCGACGGCCGTCTGAAGC
CCAGAGAAGAGCTGCGAGCCTTGGGAACCGAGCGGGAGCATGCTATGCTC
AATCCCGAAGAAAGCTGGTACCGTACCAAGGCTGTGGAATTTTCGCGCGT
GCAGATTTCCGTGGATCTCTTCTGTGTGGCGCCCGCCGGACAGCAAACTC
CTTTCATGGACTTGGCGTCTTTGACGGCCTTGTCGAAATTCACGGGTGGC
AACCTCTTCTATTATCCAGGATTTGCGATGGAGAAAGACGGAAggaagct
ggaggaagagatgggaAGGATCTTGACGCGGCCGACGGGCTTCGAGGCGG
TCATGCGGGTGCGGGCGACGCGGGGTTTGAAAGTGACACAATTTTACGGA
AACTACTATATCAGAGGCACGGATCTCCTGGCTTTGCCAAACTGCTCGAG
TGAAAGTGTGTTCGGGGTGGAGATGGCTCACGATGAAGCATTCTTGACTG
CGTCGGTCATCTGCGTGCAGGCGGCTTTGCTGCATACGACCTCGAGTGGG
GAACGTCGCATTCGAGTGCACACCGTTGCCGCGCCCGTGACGGCGGTCTT
GCAAGAAGTGATTGCCTCGGTGGATGTGGACACCCTCTGCAACCTGATGG
CCAAACGAATGCTGGAAGTGGCGCTCAAGACGGGTTTGGATGCGGCCCGG
CATCGTTTGACACAGCTGTGCGCAGACCTCCTTCGGTCCTGCCGTGCCTT
TAGTACGCACCAACCGCAGGGGAGGGCTTCCGGgtatcagcagcagcagc
agcagcaaccgGCGGGCATTCCGTCCACTTTAGAacttcttcccctctac
ACGATGGCGATGACCAAGAACGTGGCCTTCCGGGGGGGCACGGACATTCG
ACCCGATCTTCGCACGTACATGATGCAGCTCTTTTCCGTCATGAACGTGG
CAACCTCCCGTGCATTTATTCATCCTAACCTCTTCGCACTCCACACCATG
GGAAATGAAGCTGGCCTGCCCGTTCCTCCGAGTAAAGATTCCTCAACGGA
CGAAGCACCCACCGCAGGGAGACAAAAGATCCGCTTGCCTGTAGCAGTCA
ACTTGTCGGGTGAAAGGTTTGTTTCAGAGGGCATCTATCTCCTGGAAAAT
GGCATTTCGCTGTACCTGTGGGTTGGGGCGAGGGCAGATCCTCGACAACT
TGCCGCTTTGTTCGGCGGGATGACCTctgtggagggggcggacggAGGCG
TCCTCGCTCAGTTGTttgaggaaggcaaagaagagggggactACGCGCGA
CGGGTGCACGCGATTGTTCAGGCTctgagggaagaaagaagttTGCGTTG
GCTGCAGGTGCAGGTTgtgaaagaaggagacgcaGGGTTGGAGGCGTCTT
CATTGTATCGGAACCTTGTGGAGGACCGCGCGGCATTTTCAGGAGGGCAG
TATAATTACGCGGAATTCATGGGTATGGTGagtcgaggtggaggaggggg
aatgccgggagggatggggggggggggcacaagGGGTGgttggagggatg
ggaggaggacctccGCCTGGAATGGGATACCCTCCACCCTCAAGTGTTAT
GAGATGACCATAGAAGAAATCAAAGGTAGCCAAGGAAAGGAGTGACTGGA
TTTATAATGCAAGATGCGCATGAAAAAAGGACGCAAAGTAAGGAGCACAG
GCATGAGGCCTGAGTTTCAATCACGTCTAGCGAAAAtaggaggacaggag
cacAATTAGCGGTTCAATTGCTTTGACTTTATTGGCTATTTTATGGCATA
TGGCATGAAAGTATGTGTCGCCAGGTATAGGATGGCTGGTGGAGCGGACA
TGCTAGAGAAAGTCTCAATGGAGAATGTTCCCAAGAACAAGTTTAAAAGG
AAGTTGTAACCGCTTGTGGGCAAGACGCGTCAATATAGGTGTGAAGATGA
ACGTCGAAAACGCAAAAATAATAGATGCTTCGCAGAGGTTGACAGAGAAT
TGCGAATTTCACAGACACTTACTGCCGTTTATTCAAGCAAAGTGCCTTCA
AGCAAGCGTATGATTTTAATCGTTTGGTACTGAATGACTCCATGTTTGAC
CTGAATCACCTTCTAGGTTGCAGATGTCGATCTCTCATTTGCTTTTATCT
AACGGTGCTTGTCCATCTGACGTAGGTAAGATTTTATCATCACCCAAACC
TTG back to topCoding sequence (CDS) from alignment at CM002464.1:1028405..1033157+ >rna5042 ID=rna5042|Name=rna5042|organism=Nannochloropsis gaditana|type=CDS|length=2697bp|location=Sequence derived from alignment at CM002464.1:1028405..1033157+ (Nannochloropsis gaditana) ATGGGCTTGCGTCCGCCccaccaacctccccccccgccgacgcACCCACC GTCCCCCTACTCCCAACCCTCCCACGCCCAACAACATCCAGACTTGGCGG GACCCCAAGGAGGGTCGGGCCCAGCGGGCTACCCGGGGCACTACCGACCT CCCTCGATGGACTACACGGGCGCGCCCCACCCCCAAGGGATGGGGCCGAG CCCCGTGCCCGGCATGGAGGCTGCCAACCAGCTACCCATGCTCTCGGAGG TGGATCTCTCCATCGCGTCCGACCCGCGCTTCATGCGTTTCACCGTCAGC AAGATCCCGAACTCGCAGAACAACGCGGCGGCCACCAAACTCCCGCTGGG TGTGGTGATCCAGCCCATGGCCCTGGACGCCTCGGGTCAGGACTCCATCG ACGTGGTCAATTTCGGGGCCACGGGCATTGTACGCTGCAAAAAGTGTCGG ACCTACATCAATCCTTTCGTGTCGTGGCACGACGCGGGCCGGCGCTGGCG GTGCAACGTCTGTGGGACTCTGAACGACGTGTCGTCCTCTTACTTCAACC ACCTGGATGAACACGGGCAACGACGGGACAAGCACGAGCGACCGGAGCTT TCGAATGGGTCTGTGGAACTGGTGGCGCCGGGAGAATACATGGTGCGCCC GCCTCAGCCCCCGGTGTACCTCTTCGTCGTGGACGTGTCCTATTCCTCCG TGGCGAGTGGGCTGTTGGCTCGCACTGTCGAGACCATCAAGAAAAACTTA GACGCCTTGCCCGGTGACCCCCGCACGCAATTCGGCCTGGTCACCTTCGA TTCTACAGTACATTTCTACCACTTCAAGCCTTCCTTGAAGATGCCTCAAG TGCTGGTCGTTCCCGACATCTCGGagctcttcctgcccctgccgGAAGAT ATGCTGGTTAATCTGAAGGAGAGCCGGGAGGTGATTGATCTGTTGTTGGA AAGTCTGCCTGAGATGTACGAAAAGACGCGAAACATGGATTCGGCGTTGG GCCCCGCCCTAACAGGGGCCTATCGGGTCATGGCCcccgtgggagggaag atgtgCGTGGTCTTGGCCAGCATGCCCACCCTGGGCGACGGCCGTCTGAA GCCCAGAGAAGAGCTGCGAGCCTTGGGAACCGAGCGGGAGCATGCTATGC TCAATCCCGAAGAAAGCTGGTACCGTACCAAGGCTGTGGAATTTTCGCGC GTGCAGATTTCCGTGGATCTCTTCTGTGTGGCGCCCGCCGGACAGCAAAC TCCTTTCATGGACTTGGCGTCTTTGACGGCCTTGTCGAAATTCACGGGTG GCAACCTCTTCTATTATCCAGGATTTGCGATGGAGAAAGACGGAAggaag ctggaggaagagatgggaAGGATCTTGACGCGGCCGACGGGCTTCGAGGC GGTCATGCGGGTGCGGGCGACGCGGGGTTTGAAAGTGACACAATTTTACG GAAACTACTATATCAGAGGCACGGATCTCCTGGCTTTGCCAAACTGCTCG AGTGAAAGTGTGTTCGGGGTGGAGATGGCTCACGATGAAGCATTCTTGAC TGCGTCGGTCATCTGCGTGCAGGCGGCTTTGCTGCATACGACCTCGAGTG GGGAACGTCGCATTCGAGTGCACACCGTTGCCGCGCCCGTGACGGCGGTC TTGCAAGAAGTGATTGCCTCGGTGGATGTGGACACCCTCTGCAACCTGAT GGCCAAACGAATGCTGGAAGTGGCGCTCAAGACGGGTTTGGATGCGGCCC GGCATCGTTTGACACAGCTGTGCGCAGACCTCCTTCGGTCCTGCCGTGCC TTTAGTACGCACCAACCGCAGGGGAGGGCTTCCGGgtatcagcagcagca gcagcagcaaccgGCGGGCATTCCGTCCACTTTAGAacttcttcccctct acACGATGGCGATGACCAAGAACGTGGCCTTCCGGGGGGGCACGGACATT CGACCCGATCTTCGCACGTACATGATGCAGCTCTTTTCCGTCATGAACGT GGCAACCTCCCGTGCATTTATTCATCCTAACCTCTTCGCACTCCACACCA TGGGAAATGAAGCTGGCCTGCCCGTTCCTCCGAGTAAAGATTCCTCAACG GACGAAGCACCCACCGCAGGGAGACAAAAGATCCGCTTGCCTGTAGCAGT CAACTTGTCGGGTGAAAGGTTTGTTTCAGAGGGCATCTATCTCCTGGAAA ATGGCATTTCGCTGTACCTGTGGGTTGGGGCGAGGGCAGATCCTCGACAA CTTGCCGCTTTGTTCGGCGGGATGACCTctgtggagggggcggacggAGG CGTCCTCGCTCAGTTGTttgaggaaggcaaagaagagggggactACGCGC GACGGGTGCACGCGATTGTTCAGGCTctgagggaagaaagaagttTGCGT TGGCTGCAGGTGCAGGTTgtgaaagaaggagacgcaGGGTTGGAGGCGTC TTCATTGTATCGGAACCTTGTGGAGGACCGCGCGGCATTTTCAGGAGGGC AGTATAATTACGCGGAATTCATGGGTATGGTGagtcgaggtggaggaggg ggaatgccgggagggatggggggggggggcacaagGGGTGgttggaggga tgggaggaggacctccGCCTGGAATGGGATACCCTCCACCCTCAAGTGTT ATGAGATGACCATAGAAGAAATCAAAGGTAGCCAAGGAAAGGAGTGA back to top
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