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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100096g13.976.mrna |
| Orig protein id | gnl|cribi|Naga_100096g13.976 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1269549..1271392 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna504 ID=rna504|Name=rna504|organism=Nannochloropsis gaditana|type=mRNA|length=7030bp
CCCTCAAAACATACAGTGTCGTCTCCATCATCGCCTTTCGGAAAGGTCTC
AGAGTCTCCCTTTCGCTAGGCCCCACATCCAGAAGGGGTATATCAGACAA
TTGGCTAAAATCGGCGTGCGCCGCTAGGATGGACAAAGCCTCTTCGTACA
ACTCCCCCAAATTCAAGCCGGGACAGACGTCTGTGAGCACCGCGCGGAGG
ACCGAGAAGAGGAAACAAAAAAGGGGGGCGCTTAAACGCTCCTTGTAGAC
GTGGGAGGAGAAAGCAGACAGGTAGTTGATGACGCGGGCAAGGACGTCCG
CGAGCCTGCGAAATGCTTTGGGATGCTCGTCCCCCATGACTGCCACAAGC
CGGACGGCCGCGGCCAAATCCCAAGCAATCGGCTGAATGTTCCTTTCCAC
CGTGGATGCCAACGCTCGCAGCGTGTGGAAGGCCTCGTCGTGCAGAAGCC
GCGTCTGCAGCAAGGGGAGCAGCGCCGGAAGGGCGTCAGGTGTCGCCATA
TGGGCGATGGCCGGCTCGTGCTTCGCCAGAGCCACAATTGCATCGAAGAC
TACCACAGCTTCTTGCCGGAGTGCTCCCACCCGGGCACGGATCGCTGCTT
CTTCTTCCAATACCCGCCTTTCTTCTGGGGTCGGCCCACCTTGGCCCCCG
CCCTGTTTTTCTTTCTCCTCCGCCTTCTTCCTCTTAAACTCTTCCTCCCA
CTTCTCCTCCTCGGCGTCGTATACATTACCTCGTCGCCCGGTTCGCATCC
TGCGCATCTGCGCTTCCCGTTCCTGTCCTTTTCCCCCAGCGGCAGCGCCC
AGTTTTTGGGTTTGATAGACGGACGACGGAGAATGAAAGTACACAGCCAC
ATCCACAGCATTTAAATCCACGAGCTCGGGTCGCTGTAACTGCGTGAGTA
ACGCAGGAATGACTCCCTCGAATAAAATTTCTCGTCCGGGGTGCCCGAAT
GTGCTTGTCAAGGCGCACATGCACCGTTGTCCCGCTGTACGATGGGTCCG
AGGTCCCCCCTGGCTTAAGACAGCTTGAATGACCTCGTCCGAGAGGTCTA
TGGAGATGTCGTCAAAAGCCGCTTCGACTGCCTCCTGTCCGTGCAAGCCA
CCGCCCCGCATTAGACGGGCCCATAAGGCACTGGCTTGCCGGGAAGAATC
GGAGACGAGAGGATGATACGCCAAAAGGAAAGCCATTGGTAGGGACGCTA
AGCTCCCCGCGTCAGCAACTTCCTTCTCCTCGCCTGGCGTCGCCCCCTTC
AACATACACTCTACAGATGGGGCGGGAAACAGGACAGTCAAGGCCTCTGC
AAACCGCTGCGGGCACGGCCAGGCACGCTGCTGGGTCCTCCTTCCCTTGC
CCGCCAGAGATGAGGAGGTCGACTCCGATTCCTCGCTCCCATTGACAGGC
TCCTGACTGGCAACTTCCATCCTAGAGGCCACCTGGTGCACCTTCACCCA
CATCGATTTTAAAAGGGTCATCCGCGTCGTATCGGGGTCCTCTGCGAGGA
AGAATTTTAACACTGCCTCTGCCTCTCTTCGCACGTCGGCGTGCACATGC
AAAAGCAATTCCACGAGCGCCATGCCCGCAGCGTTCACGTTCTTGACACC
CAAGCTTTCGTCCGCGTCGGAATCGGGGAAAGCCCCAATCACAGCCTGCA
CACCGACGGACCGGGTGGCCGTCAACAATAGGCGTGCCAACGATATCGCT
GCGGGAGCAGAGGCGCGGGCATAGGCCTCTATTTGCGACGGCGCAAACAA
CCAGGAATCTCTTTCTGTCAGCATCTTCATGTACTGCCCTTCTTTGCCAC
CTTCAAGCCCGTCCATTTCCACCAAACAGTGCAAGGCCACCATCCCTTCC
AAATTGCCCACCTGGACCGCTTTCTTTGCCCCCTCCTTCACCACCCGAGC
GAGGGCCTCCTCCAAGCTTCCCTGCATCGGCGCCTTCAACGTCGGCGACA
GGAGCAAGGACTCCTGGACGGCCAGCAAAAGCAGCAGCAGACCCTCCTTC
TCCTTCCCGTTGCCCCCCACGCCTCCCTCCAACCCCTTCTCTAGCGTCTC
CCACACCCCAGGGGCCGGGGATGTTCCCTCCTCCACCCATCCGAGCCAGT
CCCCTAGGCCCACCGCAATCTCTGCCCGCGTCCCTTCGTGCGACTCCTTC
CCGTACGCCTTCACCAGGCCTTCCAACGCAGCGATGGTCGCTGGGGCCAA
TGCCGCCCGCGGCAATCTCCGTGCTCCCCGGGCCAAGCTCCGCAACGCGG
TGACACAAGCGTGCCGTTGGAACCACTGCGCCAATACCCCTCCCTTCCCT
GCCAACACGTCCATAACGCCCCCGACCGTCCGAGAAAAAGCAGCAGCATC
GCCCACCTTCCGCGCAAGCGTGTCCACGAGCTTCATCGCCTGCGTGCGCG
GCTCTTCTTCCATGCTCTTCAACATGCGTAACGCAGGCGGGAGGAACAAA
CTGTCCACGTAAGGACTCAAGTCCAACTCGAGTTGCGCTGCAAGGGACGC
CACGGCCGCCAGCACACCGGCCGGCGATTTCTTCAAAGCCCTCTCCACGG
CGGGACCCAGGGGGTCTGCCAGATCCTCGGGCGTGACCGTGGCCAGAAGG
CCGTCGAAACTCGCCAGCACGGAGGGGGACGGCCGGTTTTTGCTGTTGAT
CGCCTCCCGGAGATAGACCTCCAAAAAATCTCTCTTGGCCTCCGCGAGGG
CGGGCGCGGGGAGCTGGGTCCGGTAGAAATCCACCAATGCGGAAAGAAGC
CAAAGAGACGAGGAGGAAAAGGCGGGGTTCGTGGCCCGAGTCTTGTACAC
CTTGGGGAGCAAGCGAGGGTAGTGACGCAGCAGGCGCGCGAACTCGGTTA
CCCCACCCTTAGACATTCCAAGATTAGGAGGGACTCTGTCAGGCGACATG
AAGCCTTCCAAGAGAATGGATTGCGCGGTGATAGCTTTAATAACCACCTC
GGATGCGAGCAGGGAGTCTACCGTGGGATAAGGGGGAGGGGCCGACGCGT
CGGAACCTGTCAGCTTGCGGTCTTCCAAAGCCTGCCGACGTCGTTTGCCT
TCCTTAATCCATCGCTTCCGCTTGCTGGCGTCCCGTAGCTCGTGTTCCAA
CAACTGCCCCCACAAGCGCAGGGCCGCCAGCCGGGTCTCTGTGAACGTGC
AGCGACTTTGTGCATTCGTCAACACCGTGGCCATCACTTCCGGAAGCCAT
TGCCAGCGAGTCGAGGCCCGCTCCAGACCCGCGTGCAACACTTCCCGAAC
GGCATGACCGATGGTTTTGTAGTCGTTGCAAGTACTGCCCAGGGCCAGTT
CTGCGAGAAGAAGGCATAAGCTTCGTGTCACAGGGCGTGAGAAAGCTGCC
ATGGCGTCATCTCCCTCAGGGATGGCGTCGCGGACCAGGGGCAACAGCGT
TTTCTGTACAGGTGCACAAAATGGGGTTCAGAATGTATCCTAATTTTAAG
ATTCAGGAGATGTGTCACATAGAGAACAAATTCATCCTGGAAGGGCGAAA
AATTGGGGCCTTGGAAAACCACGCTATGCCTTGGAGGAGGCTAACACCAC
GAGCCTCATCGAGTCTTACACTCGGCGCACGACATACCCGGATTACACGC
AGAAGTTCGCCCTTAGAGGATGCAGCATACGCCAAGCGGCGAGTCAAGAT
AAGTTCTTCTTCCATGTCACTGTTGGCATTGGGCCCACCATCACCGTTCT
CGATTGCTGCGGTCCGGTCCTGCAAAGCCATTGGTCCTCCCGGCGTCCGG
AGTAGCCGCTTTTACGGATTACCTACGGATGCAGTGCAAGGCACAATGAA
ATAACGTGTGTCAACCCTGATGTGATCGCGTTATCACCCACAAAACATGC
ACTGTCTCTTGCTCGTGTACAGGCGGCCAGTCTTCGAGCTGTCGGGTGCT
TGCCCTCTCCTGGTGGTTGCTTCATTCAAGCCGAGCAACTCTCGAACCTA
TTGCACGACCTGCACGAGTTCGATCTCAAACATGAGCTCCTACCTGACTT
CTCTCTTATCCAGTGCGTTCGGGTCAGGCGCCGCCTTCGACTCCTCCGAT
GAAAGTGACGGTGAAAATTGCAACCCTACAACGACGCAATGCCCCACCAA
GGTCAACGTGAGCGAACCCCCTCAGAGCGGCGTCGTGAAAAGGTCTGCCG
CGGACAGCGCCTGCAGCAGTGTGCATTGGCTTAGCGTAGAGACTGATGAG
AAAGAAGCACGTGTCGTGTGCGACCAGCGGGCAGCAAAAGAAGTATTGAG
CAAATGCAGCGACACCACGCCTTTGAACCTCATCTCGATTTTTGGTGCGG
CGCGTCAAGGCAAGTCATTCCTGATGAACATGCTAGCGGGAGAAGACCGT
TTGTTCAAGATTTCATCATCTCAGGATCCATGCACCCAAGGTGTGGATAT
TTCCCGCAAAGTCGTATCGTGGGGTGCTTTTCATCGGCGGGATGGCATCG
CCTTAAAGGAGAAACCCGACCGTCGCTCACTGGCCAACGCCACGTCAGAG
ACGGCACCCAAGATTGCTTTCGTGGACGTGGAGGGACAAGGAGACAGGGA
TTTGACGTATGACGCGAACTTGGTGTGCCCGGTGGTGTTGACAAGCCGTT
GCGTCCTCTTCAATTGGAAAGACTCGCTGCAAAGGGACCGCGTCTTGAAC
CTCCTGGCCGTCATGCAACGAGCCGCATACAACGTGGCGACGGAGGAGGA
AGGAGGGTATGGCGGGCCTGGAGGCATACCGCAGAGCAAGATTTTCGGGC
ACCTGCACATCGTCTTCCGGGACTGGTCCTACCAAGGGACGCGGGAGAGC
GTGTACAGCACCCTCTTCACGCCGGAGCGTTCTTTGGCCGCTGACGCCGT
GGCCCGGAATCAGATCCGATCCGTCTTGGAGGGGGCCTTTGAGTCCATCA
CCATCTGGCTTCTGCCGCCGCCCGTGGACCGGACCACCGATTTGCACAAG
GAATTGCGGGAAAGCGACCTGAGCGACGGATTCAAGGCGCAAGTTCAGGC
CCTCCGCCACGTTTTGGCGGAGCAGGTGAAAACGCCGCAGCATTTTTGCG
GCAAAATCCTCACAGGCCCCAAGATTGCCGCCCTGGTGCCTTCCTTGGTG
CAGACGTTGAACGCGGGGGAGCAGGTGTTGCCACGGTCGGCCTACGCGAA
TTTGATCGTGTCGGAGATATCCCGTGTTCAAATCTCCTACTTGAAGAAGC
TCCAAAAGGTGCTGGCGTCTGTCAAAGAGAAGGCCACATCCACGCCCGTC
ACGACATTGGAGCTCCAGGGCCGTGTGGACCGGGAAATCCATGTTTTGCA
GCGGGCATTCGACCGCTGGCTGCACTCCTTGGGTGCCTCTTCCATCACCG
CCGAGGCCGCCGAGAAATTCCACCAGCACTGCCAGAAAGGGGCAGAGGAG
GTTTTGGCCTTGAATCAGGAGCACCTTTTGGCAGCGCATGTGCACGCGGC
GGGGAAGAGGGCGATGCACGACTTCGACGAAGCCTTTACCGCGTCGATCC
TGGCTCGACTCCCCATGGCGCCCGAGAGGGTGGTGGCTCGGCACGGGGAG
GCGCTGAGAGAGGCGGAGGAGCGGGTGCTGGCGGTGGTCAAGGGCGAAAC
GACGACCCACGCCCTGCCCGTCCCGGACGTCTTGTCCTCCTTGCAGAACC
ACGCGGCCTTGGCCCTGAGCCAAGTAGAGGCTCGGAACCAAGAGGCCTTG
GGGCAGGTGCGGGAGCAAGAGCAGGCGGCGTTCGAAGAGGCCAAGACCGG
TTTTCAGAACGTGTTTTTCCTCGCCCTCAAGAAATTGAACGCTCGTGGGT
ACCCCATTGAAGAAGCGGAGTTCACCGAGGCGTACGCGGCTGCCCTTACC
ACCGCGACAGAGTCGCTGCGACAAAGCATGCACCCGGAACTTTCCTCCCC
CACGCGGTATAAAGAATTGGAGGGCTTTTTGAAAAGCGCATGCGAGGCCG
TCAAGGGGGAGCAAGGAGCCATGTACCAATTGGGAACCACCAAAGGACTC
CTGGAAAGGGCCAGGGCGGAGGCAGAGTCGGAAATTGGTCGGCTGAAAGA
AATGGCGCGAAAAGAACGGGAAAGGCTGCAGGGGGAGCTGGAGGACGCAC
AGGCTGAAGTCGGGCGCCTGCGGGGGGAGAAAGAAACGGCAGGAAGGGCA
CAGGCGGTCGCAGTCCAGGATTTGAAAGAGCAGGGCAGGCGGGCAGCGGC
CGAGGGGGAGAAGTGGGAGGCAAGAGTCAGGGTCCTGGAGAAGGCCTTGG
CGGAGGAGAGGGAAGGCTGGGGCCGGGCCCGAGCGACCCTGGAGGAGGAG
CGGGCAGCTCTGGCGAAGCAAGTGGAGATGCTGCAGGCACAGGCGTCGCA
GGCGCTCAGGAAGCGCAAGGCGGTCGAGGAAGAGGCAGAACGAATCGTCA
AGGCCCGCCACGCCAGGCCGGCCTCCCTGGTAACGACGGAGGCAAGCGGG
GGGGCAGAGGGGGCAACGGGCGAGAAGGAGGAGGACGAGGCTGAGGACAA
GGTTCGGACGGGCATGGAAGTGGAGGAAGAGGACACGCCCGTGGTAAGGG
AAGGCGTGACAGTGCGTGCAGGTGGGAAGCAAAAAGGTAAGGCTGCCGGG
GCCCCGGGGGGGGGCGCGACGAAACGAGGCAAAGGCCGTGCGGTCGGTCA
AACAAGCCCCGAAGCCCAGCGTCAAGTGCTGGAACGAGCACGGGAGGAGG
AACGAAAACGGATAGAAGAGAGCACGGCCAAACGCGTGACCCGCGCCCGT
CGATAGAGTCGACGGAAGAGCGTGGGGGGGGGAGGGGGAGGGGGGGGGAT
CATCAGTGCAAAAGCTGGGCAAGGCGAATGAATAGAAAATACATACTGTC
TACTGTGTGAGGGCACCTGTGTGTGCTCGGAGATGGCTCAAGCAGGGAGT
CACGATGGTCGAAAGCAGGAAAAAACGCACGACACGGACGCATGCGAAAA
GAGGGTTCCGCGCAGAGGCACGGAGTAACGAAAAGAAAGCACGTCCATCA
CATGCACGTACTTCGTTGTTGGGTTCTTTC back to topprotein sequence of rna504 >rna504-protein ID=rna504-protein|Name=rna504|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MMAGAARRSSHTALALAFVLTTFVAQAFLAPKTQGLPIARRSTPAASCGP
LQAFESDWFSTAASSVASPPSSTTLIADYFSTVDEIAASIGNTPWLQFFI
PTAVGMSISLAIVFSLYLAAQPYEPPERK back to topmRNA from alignment at CM002455.1:1269549..1271392- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna504 ID=rna504|Name=rna504|organism=Nannochloropsis gaditana|type=mRNA|length=1844bp|location=Sequence derived from alignment at CM002455.1:1269549..1271392- (Nannochloropsis gaditana)
GCAGCGGCGTTGACATCGCTGCCATGCCGAAGCAAAGTGCGAACGGCCTC
CACGTCGTCGTGCCCGGCAACATGGTGCAAGGCACGTGCACCGTCGTGTT
CATCATCCTTCACGGGGCCATGATTGGGGTCTGCTCCCCTATCCAGCAAG
ACCTCAAGCAAATCTTTGCGACTTACTCGACTTGTATTTCCATCGCCACC
GCCAGCGGCGGCTAGAATCAAAGGTGTGTCACCCTTATCGTCTTCCCAGC
TTACACCCTCAGGCGCCAGGTCCAAAATATGTCGAACCATCTCCACTTGA
CCCGCATGACAAGCAAAATGCAGCGCTGTGCGACCATTTCCATCCTTGTA
TTGCCGCAAAATAGCAGCGGAGTCGTCCTCTAAGTCGGGATGCCGGTCCT
TTTCTTCCTGAAGTAAGGAATCCAGCTTCGCAGCATCGTCGCTAGCCGCC
GCGTCCACTAGCTGCGTCAGAAACGTCCGAGCATGTAAAGCCGCTTGACC
CTGACTAGCTTTATCTTGGTCGTCTTCATTATTATCTTGTGATGTGTGGG
ACGAGCTGAGGGAGTATAGGGAATGTTGACGATGGATTAGACTCCGCATT
ACACGAGAGAGGAGGTTAAGAAAGGTGCCTCGCACGCACTGCATACCTGG
TTGCCATGCTCGTAAATTTCCCGAGGGTCAGCTCAAGCACCGCACCTGTC
TGGAAGTATCAAGTTGTGAGTCGAGGAACGTAAGAGTGCCGCCCTGGTCC
CATACCATTCGAGAAAAAGGGGCTCCTGCAGATCGTGTTGGAACATCGAT
GGAGCTCACACTGCGTCCTGTCGCCTGGGGGGCAGCAAAAACAAAGCAAG
ATCCACGCGTTAACTGGGAGGACAATCCTCCATTCTCGGTCTGATCCCGT
CACTCACTATCTCTGTGATACAGAGAGGTGTGCGGATTGTGCTGACTTCG
TACCTTCCCTTGTTTTTTCAGGTGGTTGATAAAGTTGCCTCGGTACGTCC
TTGTACGCCCCCTCCCCACCTGATTTCCACCGTCCGTCTGTGTGCACAAA
CATGATGGCCGGAGCAGCGCGACGATCCTCGCACACAGCATTAGCACTAG
CATTCGTACTCACGACATTTGTAGCGCAAGCATTTCTGGCCCCAAAGACA
CAAGGTACGTCGGGTAATGGGAGAAAATAGCTGACATCTTCCCAAAGAGG
ACGGGATGAAAAGATCGAGAGCAGGGGGGAAGAGAATTAGTTTCGTAAGT
TCATGAACTTCCTGATTATTTTTCCTAGCGTTTGGGTGGCTATATTGGAG
CGTCAACCAAGCAATCAGGCGGAGAAATAAGCTATCGTACCGTCTCTCCC
TTTCTCTTTCCTGCTACCCTTGAATTGCATATCTCGGACATGCCCCTGAT
ATTTGCTTGCCAACACCCCCTCCCCTTCCCTCCTGTACAGGCCTGCCTAT
CGCAAGAAGATCTACCCCCGCTGCCTCTTGTGGGCCCTTACAAGCCTTTG
AAAGCGACTGGTTTAGCACGGCTGCTTCCTCTGTCGCATCTCCCCCTTCC
TCCACGACCCTCATCGCGGATTATTTTTCCACCGTGGACGAAATTGCGGC
CAGCATTGGCAACACCCCGTGGCTACAGTTTTTCATCCCCACGGCTGTCG
GAATGTCGATCTCTTTGGCCATCGTTTTCTCCCTTTACCTCGCCGCGCAG
CCCTACGAACCCCCTGAACGGAAATAGGCTTGGTCTCTGGCGTGAATGGG
TTGACATGTGATAGGAATTGGGCCATGTTAGACGCGAGTGCCAGGTGGTT
GAGCGGGATGAGAGAAAGAACCCAACAACGAAGTACGTGCATGT back to topCoding sequence (CDS) from alignment at CM002455.1:1269549..1271392- >rna504 ID=rna504|Name=rna504|organism=Nannochloropsis gaditana|type=CDS|length=780bp|location=Sequence derived from alignment at CM002455.1:1269549..1271392- (Nannochloropsis gaditana)
GCCTGCCTATCGCAAGAAGATCTACCCCCGCTGCCTCTTGTGGGCCCTTA
CAAGCCTTTGAAAGCGACTGGTTTAGCACGGCTGCTTCCTCTGTCGCATC
TCCCCCTTCCTCCACGACCCTCATCGCGGATTATTTTTCCACCGTGGACG
AAATTGCGGCCAGCATTGGCAACACCCCGTGGCTACAGTTTTTCATCCCC
ACGGCTGTCGGAATGTCGATCTCTTTGGCCATCGTTTTCTCCCTTTACCT
CGCCGCGCAGCCCTACGAACCCCCTGAACGGAAATAGATGATGGCCGGAG
CAGCGCGACGATCCTCGCACACAGCATTAGCACTAGCATTCGTACTCACG
ACATTTGTAGCGCAAGCATTTCTGGCCCCAAAGACACAAGGCCTGCCTAT
CGCAAGAAGATCTACCCCCGCTGCCTCTTGTGGGCCCTTACAAGCCTTTG
AAAGCGACTGGTTTAGCACGGCTGCTTCCTCTGTCGCATCTCCCCCTTCC
TCCACGACCCTCATCGCGGATTATTTTTCCACCGTGGACGAAATTGCGGC
CAGCATTGGCAACACCCCGTGGCTACAGTTTTTCATCCCCACGGCTGTCG
GAATGTCGATCTCTTTGGCCATCGTTTTCTCCCTTTACCTCGCCGCGCAG
CCCTACGAACCCCCTGAACGGAAATAGATGATGGCCGGAGCAGCGCGACG
ATCCTCGCACACAGCATTAGCACTAGCATTCGTACTCACGACATTTGTAG
CGCAAGCATTTCTGGCCCCAAAGACACAAG back to top
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