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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100546g6.2625.mrna |
| Orig protein id | gnl|cribi|Naga_100546g6.2625 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:958045..959557 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5027 ID=rna5027|Name=rna5027|organism=Nannochloropsis gaditana|type=mRNA|length=2628bp
GACCGTACAAAGACTCTGCTGACGTAGTGTATTGACCAGCTTGCTTCCCC
TGTGACCCCCTTACTCAAAGTCCCAAAAGGTACACCTTGTCGCAGATCCA
ATACGATAAGCATAGATTATCTGTGTCTCACTCTTCCGTGTTGCAACGTG
TTGTGCGCTGCGAACCTTTGTAGACTCGTTAATTAAAATGTATACGGTTC
TCGTCAATGATTAGCCAAACACATGGGACATGTATAGCGGTCTCTCGACT
GTATCGTCTTGGAAAAGTCAGTTATCTCATATAGATAAGAAATAAAAAAT
CTCTACAAACAGGCATCTGTAAACTCTTACATCCCCTGATGATTCATCAA
CGCCGAGTCATGTACCTGGCAGTACCATTGTGGATCGTGCTCTTCGGGGC
TCTCACCGCGACAGATGCCTCGCGCAGCAACATTGTCACCGGCCACACAC
ACAGGAAAGGCCAGCTATCAGGCAATCGAAAGCTTGTACGACTCGCGGAT
GAAGAGAAAAAGGGATTCCTATCAATTCCTCAGGATGACCCTGACCCCGC
GGGCCGCGCTCTACGCTTGAGCTATAGAGCGCCTTTCTGGGAGTTTGTAC
CTTATGCTTCCAAAAATCCATTACTGGTTAATTTGACCATGGCGGCACCA
GGCGGCATCCTGGGGAACCAGACGCGTCTTTCGCAAGGTGCTTTCGTTTT
GGGGCAGATTAACACCTCTGTTGAAATAGGCTTACAGACTATAGCGGAAC
CCATTTCAACCGCATGCACGGACATTAGTTCGACGGGCATGTGCTTTGAA
ACACTTGACAGCTATCTGCCTCTCTACCAGTCCCTGGACCCTGAGTACCA
GCCTGCCGCCTACAAGTTCTATGATTCTGACAAGGCATTCGCCCGCGAGC
GTCTCACCGCCTCGCCGGCATTTCTCACGCTCGTGAAAAACGTGGCCGAA
ATTCCTTTCACGCAAGCGGATGTGACGGGCTACAACACCATTACAGGGAG
TGAGTCTTTATCCAGCTTAATCGCCCAAGGTCGTGTCTTTATTGTGGATT
ACTACCCACTCTACCAGAGGGGAGTTCTGGAGGCTTCGCCGAATTCATTC
TTGGAAGCACCGACGGCCATCTTCTTTTTGGACAGTCCGACTAAAAATAT
GAAATGGAACAATTTGAAGAAGAAGGATATGGTACTTATGCCACTGGCGA
TCAAGTACAATGTGCAGCAGACTTACGTTGTGTCACCCCAAGACCCTCAT
CCTGATTGGTTTTTGGCCAAGGCGGTTTTCAACTGCTTGGATCGAGATGT
GTTGTTCGTGTACCACTTTGTACTGCATACTGCCATGAATAATATTGTAA
TCGCAGCGGAGAAGACACTGGCCAGCGAGCATCCCCTCTACATGCCAATT
CAGCATGCGGCAAAAAATGACTTTGGAATCGTGCTTTCCGGTGTAGCAGG
ACTCTTGAATCCCGACGCTGCCTTCAATGAGTTCCTTTCTCTTAGTGGAA
GCTCTGTCGCGGGACTTTCCTTCCCATATTTCATGGAACAATTTGACTGG
CGCCTCACAAACCTGTGGGAGGATCTCAAAGCACGCGGAGTATCGGATGT
GCCAGGTTATTTGTATCGTGATGACGCCGGAGCAATTTTTAAAGCTCTAC
GCACCTATTCAAAAAAGTATCTTGCAGGTTCATACAGGAAGCGCGGATCC
GTGCGAGGCGATCCAGAGCTCCGAGACTTCCTTGCTGCACTGACCAACTC
ATCGAACTCACTTGCATTCCTGCAGGGTTTCCCAACCTCAGCCGAAGTGC
GAAACCTAAAGGATGTCAGTGAATTGCTCGCACAAATTTTGTGGATCGGT
GGCGTGTTGCACCACGCGCTCAATTCGTATACATTGTTGGAATATGGGTT
GGTCTATCCTAGTCACCCGGGGAAAATTCTGGCCCCTCTCCCGGCCAGCA
CGGGCACGCTCACGGATGACACAATGTTGCAATTGTACATCTCGGGCGCT
ATGTCTGGCAACCAGGCCTCCGCCGCCAAAACCTCTGCGTCGCAAATTTC
GACGATGGATATTGGTACCCCCCTTGAATTTTTCCTGGGCACGCAAGGGA
CTGGATTTGCTTTCTTCCCGTTGCTGCAAAAGACCGGTCGGCTCACAAAC
ATCTACCTGTCCGACACTGAGGACAAGCGCACAGCCAAAGCGGCTATTGC
CCTTCGTCAGCGGCTGCGGGCTATCAGTAAGCGCATTTACAAGCGCGAGG
CCGCCGTAACTGATGTGCCCAAGTATACGCTCCTGGACCCGGCGATCCTT
CCGTTCAATCTCTTTATTTAAACTTAGATATCACGGCCCTCGTCCATGCT
ATTAGGAAGCCAGATTAGGCCGAGTAGGCTTTAAAAGGCAGGATTTGGAC
ATTTGTCACAGGTCACAGCCATATTGATCGGGGCACTTAAAAAAATCGTC
TTCCGTGCGCACCGTAAGATATCAAAACATTTAAGTGTAAGTGAAACTTG
TCCATAATCGATTAAGTCGTTGGAGCGAGTATAGGAATCACTCATATAAA
TGGAATTTACTGCCCTAGATTGTTTCGATTCTATTAGGAAGTAAAAGAAG
AAAGTCATAGCCTGCACTGGGAAAAATA back to topprotein sequence of rna5027 >rna5027-protein ID=rna5027-protein|Name=rna5027|organism=Nannochloropsis gaditana|type=polypeptide|length=163bp
MEVYKAERAARGNLAPSNYQSRAADVLGARGHGGEELYRLTYIPGPKSLP
THKEEDPVRDSLLLLQYVGLVDEGSANKDMTSLLDEARMAEDEREMVVAE
EGEGGGEEEGAVDEKGTGAASAGAGIGGEEEQEGEGSAGAGGGKRGVEDG
GGDWEGSKRARNE back to topmRNA from alignment at CM002464.1:958045..959557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5027 ID=rna5027|Name=rna5027|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp|location=Sequence derived from alignment at CM002464.1:958045..959557- (Nannochloropsis gaditana)
CCCCCCCAAGCCCCGGTGTCTTCCCGTTCGTTTCCTCCCTCCTTTCCAGT
GGTCGCACCCCACTGGACCCTCGCCGGTCTGCTCATTCGCCTCGTTTCCT
CCCTCCCTTCCCCACCGCCGCCTTTCCCTCTCTAGGTGGTGGCGTACCTG
GTGAAGCAGCTGCAGCATCTCGCCGACGAGGAGGCTTTTGATCAGTGCAT
GGAAGGCATGTGCCCCCCTCCCACTCCTCATCCTTTTCCTCCCCTTCCCC
CTCCTTGGACCTCTCTCCCGCCATTATCTTCCCGTATCAGATCTTCTTCC
TTGTGGCCCCTGACACCTGACCCTGCCTTCCTTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTGCCTCAGTCTACAAAGCAGAGCGAGCTGCCC
GTGGCAATTTGGCGCCTTCCAACTACCAGAGCCGCGCCGCTGATGTCTTA
GGGGCACGCGGGCACGGAGGGGAGGTAAGGCGAGAGGGAGGGAGGGAGGG
AGGGAGGGGTGGAGAAGTGGAGGCACGATGACTTGAGCAGTAGTATCCGT
CGTGTCCTTTTCTCTCTATTCCCGAATCTTACCCTTCCTGTCATCCTTCC
CCCCCTTTCGCCCCCCATTAGGAGCTCTACCGGCTGACGTACATCCCAGG
ACCGAAGAGCCTCCCCACGCACAAGGAGGAAGACCCTGTCCGAGACTCCC
TCCTGCTCCTCCAATATGTGGGTCTGGTCGACGAAGGCAGTGCCAACAAG
GTAGGTCGGCTCTTACTCCGGGCCGCATTTCCCTTGGGAGGACTGTGCGT
CCTCCCCGGCGGGCTCCCTCGCTGCCCGCTTGCCCTCGTTCACGCCCCTC
GCCCCCTCCTTCTTCACCTTTTCCCCTGGTTCCTCCCCGTGCCCAGGATA
TGACGAGCCTGCTGGACGAGGCCCGGATGGCGGAGGATGAACGAGAGATG
GTGGTGGCGGAGGAGGGAGAAGGAGGGGGAGAGGAAGAGGGAGCCGTCGA
CGAGAAGGGGACAGGGGCTGCGTCCGCGGGAGCGGGGATAGGAGGGGAGG
AAGAGCAGGAAGGGGAGGGCTCGGCGGGTGCAGGAGGGGGAAAGAGGGGG
GTGGAAGACGGAGGAGGGGACTGGGAAGGGAGCAAGAGGGCGCGAAATGA
ATAGGAAGGTGAGGAGGGGAAGAAGAGCCAATCGTACGATGTTGGATGAA
TGTCGAGCAGGCTTTTTTGCTCGGCAAGGAGACAGAAGAAGAGCGCCCCG
ACAGAAGAGAGCAAAGACGAGAAAGCGAAGACGGGGTGGTAAGAAAGGGG
AAAAGGAACGGGCTCTGAATCAAGAAAGTATGGGGAAGAGTCAGTGTAAA
CTCCTCTTCTCCGAGGGCAGAGCGCGCGGGGCGCAGTTGAGTGGGGAAAA
GCTTCCTATCGTACGTAATGGCGTGAAGAGAGAGGATGCGGAGGCAGGAG
AATGTACTCAAGGAGTATGGAAAAGGAAGAGTAAATTTGCAAAAGCTTCG
AGCCTCCAGAACG back to topCoding sequence (CDS) from alignment at CM002464.1:958045..959557- >rna5027 ID=rna5027|Name=rna5027|organism=Nannochloropsis gaditana|type=CDS|length=1968bp|location=Sequence derived from alignment at CM002464.1:958045..959557- (Nannochloropsis gaditana)
GATATGACGAGCCTGCTGGACGAGGCCCGGATGGCGGAGGATGAACGAGA
GATGGTGGTGGCGGAGGAGGGAGAAGGAGGGGGAGAGGAAGAGGGAGCCG
TCGACGAGAAGGGGACAGGGGCTGCGTCCGCGGGAGCGGGGATAGGAGGG
GAGGAAGAGCAGGAAGGGGAGGGCTCGGCGGGTGCAGGAGGGGGAAAGAG
GGGGGTGGAAGACGGAGGAGGGGACTGGGAAGGGAGCAAGAGGGCGCGAA
ATGAATAGGAGCTCTACCGGCTGACGTACATCCCAGGACCGAAGAGCCTC
CCCACGCACAAGGAGGAAGACCCTGTCCGAGACTCCCTCCTGCTCCTCCA
ATATGTGGGTCTGGTCGACGAAGGCAGTGCCAACAAGTCTACAAAGCAGA
GCGAGCTGCCCGTGGCAATTTGGCGCCTTCCAACTACCAGAGCCGCGCCG
CTGATGTCTTAGGGGCACGCGGGCACGGAGGGGAGATGGAAGGATATGAC
GAGCCTGCTGGACGAGGCCCGGATGGCGGAGGATGAACGAGAGATGGTGG
TGGCGGAGGAGGGAGAAGGAGGGGGAGAGGAAGAGGGAGCCGTCGACGAG
AAGGGGACAGGGGCTGCGTCCGCGGGAGCGGGGATAGGAGGGGAGGAAGA
GCAGGAAGGGGAGGGCTCGGCGGGTGCAGGAGGGGGAAAGAGGGGGGTGG
AAGACGGAGGAGGGGACTGGGAAGGGAGCAAGAGGGCGCGAAATGAATAG
GAGCTCTACCGGCTGACGTACATCCCAGGACCGAAGAGCCTCCCCACGCA
CAAGGAGGAAGACCCTGTCCGAGACTCCCTCCTGCTCCTCCAATATGTGG
GTCTGGTCGACGAAGGCAGTGCCAACAAGTCTACAAAGCAGAGCGAGCTG
CCCGTGGCAATTTGGCGCCTTCCAACTACCAGAGCCGCGCCGCTGATGTC
TTAGGGGCACGCGGGCACGGAGGGGAGATGGAAGGATATGACGAGCCTGC
TGGACGAGGCCCGGATGGCGGAGGATGAACGAGAGATGGTGGTGGCGGAG
GAGGGAGAAGGAGGGGGAGAGGAAGAGGGAGCCGTCGACGAGAAGGGGAC
AGGGGCTGCGTCCGCGGGAGCGGGGATAGGAGGGGAGGAAGAGCAGGAAG
GGGAGGGCTCGGCGGGTGCAGGAGGGGGAAAGAGGGGGGTGGAAGACGGA
GGAGGGGACTGGGAAGGGAGCAAGAGGGCGCGAAATGAATAGGAGCTCTA
CCGGCTGACGTACATCCCAGGACCGAAGAGCCTCCCCACGCACAAGGAGG
AAGACCCTGTCCGAGACTCCCTCCTGCTCCTCCAATATGTGGGTCTGGTC
GACGAAGGCAGTGCCAACAAGTCTACAAAGCAGAGCGAGCTGCCCGTGGC
AATTTGGCGCCTTCCAACTACCAGAGCCGCGCCGCTGATGTCTTAGGGGC
ACGCGGGCACGGAGGGGAGATGGAAGGATATGACGAGCCTGCTGGACGAG
GCCCGGATGGCGGAGGATGAACGAGAGATGGTGGTGGCGGAGGAGGGAGA
AGGAGGGGGAGAGGAAGAGGGAGCCGTCGACGAGAAGGGGACAGGGGCTG
CGTCCGCGGGAGCGGGGATAGGAGGGGAGGAAGAGCAGGAAGGGGAGGGC
TCGGCGGGTGCAGGAGGGGGAAAGAGGGGGGTGGAAGACGGAGGAGGGGA
CTGGGAAGGGAGCAAGAGGGCGCGAAATGAATAGGAGCTCTACCGGCTGA
CGTACATCCCAGGACCGAAGAGCCTCCCCACGCACAAGGAGGAAGACCCT
GTCCGAGACTCCCTCCTGCTCCTCCAATATGTGGGTCTGGTCGACGAAGG
CAGTGCCAACAAGTCTACAAAGCAGAGCGAGCTGCCCGTGGCAATTTGGC
GCCTTCCAACTACCAGAGCCGCGCCGCTGATGTCTTAGGGGCACGCGGGC
ACGGAGGGGAGATGGAAG back to top
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