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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100355g2.9419.mrna |
| Orig protein id | gnl|cribi|Naga_100355g2.9419 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:944196..945405 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5018 ID=rna5018|Name=rna5018|organism=Nannochloropsis gaditana|type=mRNA|length=2021bp
CGTAGCCACGAGATGGTAGCGTTGAAGTGCAATCCTGTATGAGATCCCCC
CCGTCCCCCCCCCACATTATTTCACTGGGATAGCAGAGTCAGCCCGCGAG
CACTTGTCGATAACTCCACATCACCTCTGTGCTTCCCTAGCTCAATCCAG
CAACCCTTTATCCCCTCCCTTCCTTTTGCCTTCTCAGGACGGTGGACGAA
TGAGGAGCACGTCCTCTTCTTGCAGGGCCTTGACGCTCATGGGAAAGACT
GCAAACAAATACACAAGATGCTGACCACTCGGAGCCTTGGCCAAATCCGG
AGTCACGCCCAGAAGTATTTCCAGAAGGTGGAGCAGGCGAAGCGGAGCGG
GAGGCTCGGCGACGGCGATTTTCAGCTCCTTATGGACGGTAAACGCATGG
TCTTCTCAAGGGGTGGAAGGAGACCGACAGGTGCCTCCAATGCGCTTATC
CAGGAGGCGGGCGGGTCCCGAGACAAGAGGCGTGCCACCGGGTGCGACGA
GAGCGCAGGCACCGGAGTGACGGGGTCGTTGCCTTCCCCTTGTGCGTCCT
CCATCTCCTCCCTCACCTCCTTGGCCTCTGAAAGCTCTCGTACAAGTACT
CCCAGTCCCGTGTCTCTCGCCTCACAAAGGACGCTGTCGGACGCCACCGT
GTCCTCTTGCACCACCACACCCTCCCTCCCCTTCCCCTTTGACGAAGCTT
CGGACCTTGAGGGTAACCCCCTGCATCAAGATCAGGAGAGCAACCTCGCT
GAGCACCAGACCGACGGGTCCTTTGACGGGCTATCTCAGAATACGCACAA
TCCCGTCCCGTTCCTCGATCTTCGCCATCGCCACCAGCAGCAGCAACACC
AATATCCCGACCAGTGTCAGCAGCAGCAGTGCCCTAGCTCGCCCTCGTCT
ACTTGCTGCTCACCTCGTGGCGGTGTCTGGAGGACCATGGCCGGCAAGGG
CTGGCTCCCCGACATCAGCCCCGTGAGCAGCATAGAGGAGGAGACCGACG
CGGTCGTCGAGTCCGAGCGCGAAGACGTCGGCGTGAGCTGGGGCGGGAGG
GAGGGAGGGGCGAGGGAAGAAAGGAACGAGGACGAGGTCGAGGACGCGCT
GGCGATGGACTTCCTGCGGGCCACGTCCCACCTCTTCCCCTTGGAGGAGC
TCAGGTCCTTTGTCACCGGCGTGGCGTCGGACGTGGGAAGCCACCGGGAA
GATGGGACGTTCCCGGCGCCGCATGCCATGGCGATGGACGAGCTTGTAGG
CCATTCGCCTGGGTCCACGGTACCGGCAGGGTACTGTCGAGGAAATGGCG
GCAACGTGCAAGGGGCAAACTGGGCGTGGACAGGGACAGGGGCGTCGGTG
CCTGCAGACACGGATCCCTTGACGGTCGGACCACTCATGTCAAGCTGCGC
CGTCGCCTCGGACGACGCGAGTCACCGTGGGAAGTCTGAGTCCTTTCTAC
GTCCTAATGGGTCGTGATGTCCGTCGCTCCCCTTGTGATCTCCTTTCTTC
CTCTGTCTGCTGCCGTGGAGTTAGACGAGGCGATCGGATCTTCTCAGGAG
GAGGGGAGATAGAAGGGGGGGTTAATCTTTGTCGGGAAATGACGAGCATT
TCATTCGATGAGCTCGCAATTCTATGACAGGTTGAAGCACGAGTAATATG
ACACGGGCTATGATTAAGTGAGGAGAAGGAGAATCTATTAGGTGTTTGAA
GGCATTTTTCTTGTGAAGACGAACGAGACCGGCTGGAAAGATGTGACAGA
TTTGAAGAGAACCTTGAATGATAGACTGTAGTCAATCGCGTACGATGCAA
TTGAGCAAAGCATCCACACCTGGATATCTATGTGTCATGGGATTTGCAAA
GCAGGTCTTCATGATATTGAAGCTAGATGGCGAGGAATATCACGATCCTC
CTCAAGTAAAACTGCTGGGTAATCATTGGATGAGAATTTCTGATAAAGTA
CTCCTTCATGGGGTTGAAGGTACTTGGCGAGGAGAAGTACAACTTTTCTC
AAGTAAACTGCTAGGCAATCA back to topprotein sequence of rna5018 >rna5018-protein ID=rna5018-protein|Name=rna5018|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MSTHFVRRSNNVLFLCYKYLPVDAVIASHTVHRRPIFVPWLKTDVYLAIS
CCYGEYHCLVLFSSFLITLVRVLFFSLLPHHPTLPPHHQPGNVLSQRHLS
LCSFHFFPSPLTVSCGCIFALRSFLPSPCPHPIREQGMRL back to topmRNA from alignment at CM002464.1:944196..945405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5018 ID=rna5018|Name=rna5018|organism=Nannochloropsis gaditana|type=mRNA|length=1210bp|location=Sequence derived from alignment at CM002464.1:944196..945405+ (Nannochloropsis gaditana)
GAGAGAGACTCTGGCGATCTTCAAAGGTAATGCAACCATAAGTAGCCCAC
ACAAAGAAGCAAAAGTAGTTCACACAGACACACCGTTTGGAAGGCATCAT
TGAAATGCGATGGTGGACGTCTTGTCGCACATCAGTGCATCCTTCGCGGC
AGCTTTGTTTGATTGCTAGTGTCCCGGGGATAACCGGCACATACACTCCC
GCTTTGAATGTTCGGAGAACGTGTCCGAAGCAACAAACTTGTGCTGCagt
gaaaaagaaagaagccaATCAGATTTACACGCTGTTGATCTGTTTTCCAA
GTTATGTCAACGCATTTTGTCAGGCGTTCAAATAACGTGTTATTCTTGTG
CTACAAATACTTACCCGTCGACGCGGTTATTGCAAGTCACACAGTACATC
GACGCCCAATCTTCGTCCCCTGGTTGAAAACAGATGTGTATTTGGCGATT
TCATGCTGCTATGGAGAGTATCATTGTCTGGTACTTTTTTCATCTTTTCT
TATAACACTTGTCAGggtcctctttttctctcttttacCCCatcatccca
ccctccctcctcaccatcAGCCAGGCAACGTCCTCAGCCAAAGGCATCTT
TCACTGTGCTCATttcactttttcccttcccctctcacgGTCTCATGTGG
TTGCATTTTCGCacttcgctccttccttccttccccttgcccacACCCCA
TTCGTGAGCAAGGCATGCGTCTCTAACCAAGCATCCATCTCCTGCACGTG
CACCACCTTTAACGCCGGCATATGTGACGCACGCGTCGTCCGATGACCTC
CGCGGGTTTTGATGtcgtaggaaggagggtggaagaacggggaggaagac
gtcggcagccctttcccttgttTCAAAAGGAtttcgtggacgaggaggtc
gAGTCGCCTGGGAAGGTcatgagagggaaggaaagcgtccacggcccccc
caaaaaaaattTAAAATTTGGAGGTGGGGATGCTTGAAAGAGAGGGATAT
TTCCGAGATAGAAGGGGTCAACACGGGCCGGGGGCGACACGACGGACCGC
GGGTTCAGGAAGAAAGGTGACTGGGCTTAAGGGGTGGTAAAGCACTGTGT
CCGCCCACCCAAATTGTGAGTATGGAATCACCAATTCCCCAGACCCCACG
GCCGCGGGGTAATGTGCCGCGTCGTAGCCTCCCTACACAGGGATGTACCA
TTTCCTTTCG back to topCoding sequence (CDS) from alignment at CM002464.1:944196..945405+ >rna5018 ID=rna5018|Name=rna5018|organism=Nannochloropsis gaditana|type=CDS|length=423bp|location=Sequence derived from alignment at CM002464.1:944196..945405+ (Nannochloropsis gaditana)
ATGTCAACGCATTTTGTCAGGCGTTCAAATAACGTGTTATTCTTGTGCTA
CAAATACTTACCCGTCGACGCGGTTATTGCAAGTCACACAGTACATCGAC
GCCCAATCTTCGTCCCCTGGTTGAAAACAGATGTGTATTTGGCGATTTCA
TGCTGCTATGGAGAGTATCATTGTCTGGTACTTTTTTCATCTTTTCTTAT
AACACTTGTCAGggtcctctttttctctcttttacCCCatcatcccaccc
tccctcctcaccatcAGCCAGGCAACGTCCTCAGCCAAAGGCATCTTTCA
CTGTGCTCATttcactttttcccttcccctctcacgGTCTCATGTGGTTG
CATTTTCGCacttcgctccttccttccttccccttgcccacACCCCATTC
GTGAGCAAGGCATGCGTCTCTAA back to top
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