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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100091g11.5715.mrna |
| Orig protein id | gnl|cribi|Naga_100091g11.5715 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:15076..16964 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5 ID=rna5|Name=rna5|organism=Nannochloropsis gaditana|type=mRNA|length=2981bp
CATCCTTCTTTCTTCTGGTATTTCCCATATCAGGTTGTGGACTTGGACAT
CCCGCGCAGCGCATGGCACATCTTTGCGCTGTGCGTGTCATTGTGGGACA
GAGAAAAGCATTTGTCTGCGACCATTTACCTCCCAGTGCCCCCCCGCTTG
CCTCCTGCCGTTAAGCTGCTGCGCTCGCTAGAAATCGGCACGAGCCATGC
CACGCTTGTATCGTCCCTCCTTCCGCCACGTCCAAGGAATGCGTATACCT
TGGCATCGAGCGATAGCACGCTATGCCTCTCTCCCTCGAGGGCTACGTCT
GTCTTCTGCCGTCCAGGCAGCACTGGCTGCGCACAAGCCCGTCGTGGCTC
TGGAATCCACCATTATCACGCACGGCATGCCATACCCTACCAATCTCCAA
ACTGCACGAGAGGTAGAAAAAATCGTCTCAGCCGGAGGGGCCACGCCGGC
AACCATCGCGGTCATGGACGGCCATTGCTGTGTGGGTCTGTCACCTTCCC
AACTGGAGGCTTTGGCCAGGGAGGGGCCCGAGCGCGCCATCAAGTGCTCT
CGGAGGGACTTGTCTTGGGCGCTGATGACTCGCTCCTGGGGCGCCACGAC
CGTGGCCAGTACGCTGCACATCGCTCACCTGGCTGGTATTCGCGTCTTCG
TCACGGGCGGGGTCGGAGGCGTGCACCGCGGGGCGGAGGAGACTCTGGAT
ATCTCGGCGGACTTAATGGAGCTGGGGCGCGTGCCGAATATGGCCGTGGT
CTGTGCGGGCGTCAAGTCCATACTGGACATCGAAAAGACGCTAGAGGTGC
TAGAGACGCAAGGCGTTCCTGTCGTGGGCTACCGGACAGACACTTTTCCT
GCCTTTTTCACGCCCGATTCGGGTCTGGGAGCCCCTTGTCGTGTTGATTC
GCCCGAGGAAGTCGCGGGCATGCTGGAGGCATCCCTTTCTGCGCGTCTGC
CTGGCAGCATCCTGGTTGCAGTGCCGAACCCTGCGCCTGCGGAGGCGTCA
GCCACGCAAGGAGCGATCGAGGAGGCGCTGCATGCAGCTGAGACGATGGG
ATTAAGGGGGCAAGCCGTAACGCCCTTCCTGCTCGAGCGGGTCAATAAAG
CCACGGGCGGGGGCTCACTCCGGGCGAACATTGAGCTGGTGAAGAACAAT
GCCAGAGTGGGTACGGAAATCGCCGTGGCGATCGCGGCACAGGAGGAAGG
GGGTATGTCAAGGAATGGAGGAGGGCGGGGTATTGGGGCCATGGAGGGGC
GCGAGGGAGGGAGGAAAGCAGCTGGGATGGCTGAACAAAGGCAGTCACTA
CCTTCTACCCAAGCGTCAAAGCCAACGGCGTCTCCTCCTTCCCGGACGCC
CTCCTTTCCCCCCCGTGTCTTGGTGGTGGGCGGCGCCGTCATGGACGTGG
TCGGAAGCCCGGGCTCGGACTACGGGGCCTCCTGGACATGCGGAAGCGAG
AAACACCCTCGCTCACTCGACGCCCGCCTTAAGAGATTGGAGCCTGGCAG
CTCCACACCGGGGAGGGTGCGGCAGAAAGAAGGCGGTGTGGCCCGCAATG
TGGCGGAGGGCTTGGCTCGCCTGGGGGTGCCCACCGCCTTCCTCTCGGTG
GTCGCCCAGGACCCCGCTGGCGCCGCGCTCGCCTCCTCCCTCCGTGCCTT
GGCCCCCTCGCTGCTGTTGGAGTGCGGGCACGAGGACGTGATCCTCTATC
AGGCCCCCGGGCCCGGGCACCGGACCGCGAGTTGTCTCGTCGCCTTGGAC
GGGGGGGGGAGCTGGTGGCCGCCGTGGCGGACATGGCCATCTTCCGCGAT
TACCTCACGCCGGAGAGGGTGGTGGCGGGCCTAGAGACAGCGGCGGCCTT
GGCCGAGGCCCGGAAAGGAGGGGAAATGGAGCCCCCTGCCGGCGCTCCCC
AGGCCTCTCTGGGTCCTCACGCTGCCCCTCTGCTAGTCGTTAGCGACGGA
AACCTTTCCATCGCCGCCTTCAAAGCCCTTGCGCACGCCTGCGCCTCGCG
GGGGCTACCTCTCCTCTTCGAGCCCACGTCCGTAAGCAAGGCATGCCTCC
CATTGCAGGCAGGCGCCCTCCACCACACGAGCCTGATCACGCCCAACCTG
AAGGAGCTCGGGAGGCTTGCACACTCGATCCGGGAGGGAAGAAGGGAGGG
TGCGACAGAGGGCGATATGGCGTGGGAAAGGCTCGAGCAGGACGTGGTCG
CTGTGTTTGGAAAGAGGAGCTCCGGAGAGCGGGTGGAGAGGGAGGTAGTC
ACACGGCTGCAGGCCGACGTGGAGGTTGTCCTGGGGGCCATGGCGGACGA
GGGGGAAAGGAGCGTAGGCAGAGAGAAGGAGGGAGAAAATTCAAGCGCAA
GCCCTGGATGGATGGGAGAGAAGCACGTACTGGTCACGATGGGACCCCGA
GGTCTCGTGTGGGCGTCCTGTCGAAGGGAGGACGGGGGGGAGGCAGCGCA
GGAGGGGGGACCAGGAGGGCGTAGGGGGGCGAAGGCAAAGAGGGGAGCTA
TCGAGATGCGATATTTTGCTGTACCGGGTGCGACACCGGTGGAGAGGATG
GTAAACTGTACAGGTGCAGGCGACACGTTCGTGGCTGGGCTTGTGGCCGC
CTTAGTGCGTGGCAGCGAGCGGGGCATGGGGGGGGGCCGTGGCCGTCGGG
TTGGCGGCGGCGAGAGAATCCGTTCAAGTGGAGGAGGCGGTTCCCAGGCA
CATGACTTGGGAGGGACTAACCGGCGCGCGGTGGGGCGGGTGAACGCCGC
TAAAAGTGCGGTGCATGGCAGCGCTGAAAGGGGGCTCCGCGATATGGCTC
GTCGATACTGTCGCGACTTCAAATCACTGGGAGAGGAAACTCGCGTTACC
GCATTGCGAAGCGCGAAACCAAGGCGTTGCATCAGTAGGGTGTGGGTCAC
GATGAGATTAATGTAAGTACTGCATCAAAGCAATCAGTCGAGGACTCTTG
GTCACCACGTCCATCACACTCGGTCGACAGT back to topprotein sequence of rna5 >rna5-protein ID=rna5-protein|Name=rna5|organism=Nannochloropsis gaditana|type=polypeptide|length=273bp
MSCKTCLGKFFGILGSNIFFVALVAMVAAVFTQRWAVSSQRDVSVAGMPT
NADLQFGIFDMSARVMQEGKVQWSQYSYTWCNAKETTDDGAPWTNERMYC
NLLLTAQACSIISLATGLTAGVIAAFLSAGVIVNKRFREIACASSFFMLV
QFTSALLTFACWFGINTKINNDLDKAFPGIFVRPSYSAFLAVICAGLVLL
GFITTSALGGCGKTAARKVAEEEEESEDEEEGRAAHAPRQARDKKAKAGA
PQPGAQRAAHAQAAGGEEMKESQ back to topmRNA from alignment at CM002455.1:15076..16964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5 ID=rna5|Name=rna5|organism=Nannochloropsis gaditana|type=mRNA|length=1889bp|location=Sequence derived from alignment at CM002455.1:15076..16964- (Nannochloropsis gaditana)
AAAATGCTATCCTTATATAAGTCAGCACCTGGCGCGATAACATGAATGAT
TAAAATACTATTGCCACATTTCCTGGAGATCCTATGATCCTCTGGAGTCG
TGAGGTCTCGACCTTGTCTATTCAGAACATAATGCTTAGGTCCGACGTCT
CCAGAACAGCAAAGGAAAGTATCTTTATAAGGCTAATTGCAGTATACTCA
CCAGTTACATCAACCATTCACTACTGATGTCGCGCCACGATTTGTTGGAT
TGGTTCTTTATCAATACTTAGTGTCCATTCACATGTGGCTTCTGGAGAAC
ACGAAATTGGGAAGATGAGTTGTGCGCCGCTTACCTCCTCTTTCTCCGAG
CTCCGTCCTACCTGGAGGGAAACACAATTGAGGAAGCATACCTGCTCGTG
TGATTTGTTTCCACACAACAATCATGTAGTATCTAGAAAGCTGAAGATCA
GGCCTCGCACCACACTCACCTTCTTCTACACTTCGTTCTCGTTTCTCACA
GCAGTGCCTGATATCCTTCTCTATATCACCATTAAGAATGAGTTGCAAGA
CATGCCTTGGCAAATTTTTCGGTATTCTCGGGAGTAACATATTCTTTGTT
GCTCTTGTAGCCATGGTAGCTGCTGTTTTCACGCAACGCTGGGCTGTCTC
AAGCCAGCGCGACGTGTCTGTGGCCGGCATGCCTACGAACGCGGATCTTC
AGTTCGGTATCTTCGACATGTCAGCGCGAGTCATGCAGGAAGGAAAAGTG
CAGTGGAGCCAATATTCTTATACGTGGTGCAATGCGAAGGAGACCACGGA
CGATGGAGTAAGGGCAAAAGCGGGATATTAGGGGGAGAACTATGTATTGT
ACTTGCATGCACAGAATGACCTCTGTTCCATGATTCATTTTACGCATGTT
TTTTGGCTCCCGTTTACTCAGGCTCCTTGGACAAACGAGCGGATGTATTG
CAACCTTCTGCTCACAGCACAAGCCTGCAGCATCATCTCCCTGGCCACGG
GTTTGACAGCCGGTGTCATCGCCGCTTTCCTCTCTGCCGGCGTCATCGTC
AACAAGCGCTTCCGAGAAATCGCCTGCGCCTCATCATTCTTTATGCTGGT
ACAGTTCACGTCTGCCCTCCTCACCTTCGCCTGCTGGTTTGGCATCAACA
CCAAAATCAACAACGACCTTGACAAGGCCTTCCCCGGTATCTTCGTCCGT
CCCTCTTACTCTGCCTTCCTGGCCGTCATTTGCGCCGGCCTGGTCCTCCT
GGGATTTATCACCACCTCGGCCCTGGGTGGCTGCGGCAAAACGGCGGCCC
GAAAGGTAGCGGAGGAGGAGGAAGAGAGCGAAGACGAGGAGGAGGGGCGT
GCAGCACATGCCCCCCGACAGGCGCGGGACAAGAAGGCGAAGGCGGGGGC
GCCCCAGCCTGGCGCCCAACGCGCGGCGCATGCACAGGCCGCGGGTGGGG
AGGAGATGAAGGAGTCCCAGTAGGACGGCGAGGCACAGGGAGACTGGGTG
GGAGGATATGGGCCGCGAGCAAGGGGAAGAATGGCATTCGAGTGGGCTGG
GGCGTCACACAGGAGGTCATTCTGGGAGTGGGAGCTGGAGAGAGGGAGTT
CGTTCTTGGGAGCCGGGATATTAAGTCACGGAGGACATAAGGGCTCGGGA
TGGGGAATGGAAAGCACTGTATTTGGCTGTACGGGCTTGAATGTGCGTGT
TTGGGAATGGGAGAGAAGAAGCAAAGCCGGCGTGAAAAGACCTGGGTCCA
CGCGAACGGTCGAACAAAGTCTATGGGGTTGCAGCAACTGCAGCTGCAGG
GAGGGATGTTCAAAGGGATGCTTGAAGGGATGCTCAAAGGGATGTTCAAA
GAAAAAATAAAGTTGTCGTAAACATACATCCTGTGAGCA back to topCoding sequence (CDS) from alignment at CM002455.1:15076..16964- >rna5 ID=rna5|Name=rna5|organism=Nannochloropsis gaditana|type=CDS|length=1644bp|location=Sequence derived from alignment at CM002455.1:15076..16964- (Nannochloropsis gaditana)
GCTCCTTGGACAAACGAGCGGATGTATTGCAACCTTCTGCTCACAGCACA
AGCCTGCAGCATCATCTCCCTGGCCACGGGTTTGACAGCCGGTGTCATCG
CCGCTTTCCTCTCTGCCGGCGTCATCGTCAACAAGCGCTTCCGAGAAATC
GCCTGCGCCTCATCATTCTTTATGCTGGTACAGTTCACGTCTGCCCTCCT
CACCTTCGCCTGCTGGTTTGGCATCAACACCAAAATCAACAACGACCTTG
ACAAGGCCTTCCCCGGTATCTTCGTCCGTCCCTCTTACTCTGCCTTCCTG
GCCGTCATTTGCGCCGGCCTGGTCCTCCTGGGATTTATCACCACCTCGGC
CCTGGGTGGCTGCGGCAAAACGGCGGCCCGAAAGGTAGCGGAGGAGGAGG
AAGAGAGCGAAGACGAGGAGGAGGGGCGTGCAGCACATGCCCCCCGACAG
GCGCGGGACAAGAAGGCGAAGGCGGGGGCGCCCCAGCCTGGCGCCCAACG
CGCGGCGCATGCACAGGCCGCGGGTGGGGAGGAGATGAAGGAGTCCCAGT
AGATGAGTTGCAAGACATGCCTTGGCAAATTTTTCGGTATTCTCGGGAGT
AACATATTCTTTGTTGCTCTTGTAGCCATGGTAGCTGCTGTTTTCACGCA
ACGCTGGGCTGTCTCAAGCCAGCGCGACGTGTCTGTGGCCGGCATGCCTA
CGAACGCGGATCTTCAGTTCGGTATCTTCGACATGTCAGCGCGAGTCATG
CAGGAAGGAAAAGTGCAGTGGAGCCAATATTCTTATACGTGGTGCAATGC
GAAGGAGACCACGGACGATGGAGCTCCTTGGACAAACGAGCGGATGTATT
GCAACCTTCTGCTCACAGCACAAGCCTGCAGCATCATCTCCCTGGCCACG
GGTTTGACAGCCGGTGTCATCGCCGCTTTCCTCTCTGCCGGCGTCATCGT
CAACAAGCGCTTCCGAGAAATCGCCTGCGCCTCATCATTCTTTATGCTGG
TACAGTTCACGTCTGCCCTCCTCACCTTCGCCTGCTGGTTTGGCATCAAC
ACCAAAATCAACAACGACCTTGACAAGGCCTTCCCCGGTATCTTCGTCCG
TCCCTCTTACTCTGCCTTCCTGGCCGTCATTTGCGCCGGCCTGGTCCTCC
TGGGATTTATCACCACCTCGGCCCTGGGTGGCTGCGGCAAAACGGCGGCC
CGAAAGGTAGCGGAGGAGGAGGAAGAGAGCGAAGACGAGGAGGAGGGGCG
TGCAGCACATGCCCCCCGACAGGCGCGGGACAAGAAGGCGAAGGCGGGGG
CGCCCCAGCCTGGCGCCCAACGCGCGGCGCATGCACAGGCCGCGGGTGGG
GAGGAGATGAAGGAGTCCCAGTAGATGAGTTGCAAGACATGCCTTGGCAA
ATTTTTCGGTATTCTCGGGAGTAACATATTCTTTGTTGCTCTTGTAGCCA
TGGTAGCTGCTGTTTTCACGCAACGCTGGGCTGTCTCAAGCCAGCGCGAC
GTGTCTGTGGCCGGCATGCCTACGAACGCGGATCTTCAGTTCGGTATCTT
CGACATGTCAGCGCGAGTCATGCAGGAAGGAAAAGTGCAGTGGAGCCAAT
ATTCTTATACGTGGTGCAATGCGAAGGAGACCACGGACGATGGA back to top
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