rna498, rna498 (mRNA) Nannochloropsis gaditana

Overview
Namerna498
Unique Namerna498
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1185
Alignment locationCM002455.1:1248740..1249782 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100096g6.973.mrna
Orig protein idgnl|cribi|Naga_100096g6.973
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1248740..1249782 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100096g6gene479Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30165.1cds498Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna498rna498-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna498 ID=rna498|Name=rna498|organism=Nannochloropsis gaditana|type=mRNA|length=1185bp
ATGGCGGGCCAATCAAATTCCGACACCGTCCCTTTAAAAAGTCGGAAACC
TGAAGATACGGCTTTTAAGCAACAAAGACTTCCGGCCTGGCAGCCTATTT
TGACCCCTAAATGGGTAATTATTACCTTCACTCTCGTCGGCCTGATCTTC
GTCCCACTGGGCATTGTTCTCAAAATACAATCCGACGCTATCGTCGAGTA
CTCGCTTCAATACGATGGCGAGGGTACGCCTGAATCTTTGGCGGACTGTC
AGATTCTGGACCCCAACGAGGCCTCCGCCCACCCCCCTTGCACGGTCACA
TTCGACATCACCAGGGAGATGAAAGCCCCCATTTACGTTTACTACCAGCT
CGATAACTTCTATCAGAACCATCGCCGGTACGTCAAATCCCGCTCCGATG
CCCAGCTTATGGGCAACGTTCTTTCGGAAGCGGAACTGTCCGACTGTGAT
CCTCTGCGGACCATCAACGTGGCAGGAGAGACGCGCGTCTTAAGCCCCTG
TGGGCTCATTGCCAACAGTTTTTTCAACGATTGGTACGTCCTGGCTTCCC
CTCCCACGGGCCCCGCCAACCTGACTCTCGACGTGGAGGGCATCGCCTGG
GAGAGCGATGTGGACCGGCGCTTCGCCCAACCGGACGGCTTTCTGGCCGA
GCCCAATCTTGCCGGGGCCGACTGCGATGCCTTGCTCGGGACTCCGCCGG
GGCAGGCTGTCGCAGCCACCTACACGCCTCCTGGAGGGACCGCGGGCCCG
CTCCCTCCCACCCCGCAACCCTGGTGTGTCTTCTATCCCGAGCCAGACAA
GTTCTTCTACTTGTACCAGCGGTACCCTTTCTTTCCGAATCTGGCCGTCG
AGGGCGTGACCAACGAGCATTTCATTGTCTGGATGCGCACGGCGGGCTTG
CCGACCTTCCGAAAGCTCTACGGCAAGATTGACCAGGACTTGCCCGCGGG
GACGCAGCTCTCCTTCACGGTGCACCCCGGATTTGAGGTGGTGTCCTTCT
CGGGAAGGAAACACTTGGTCGTGTCCACCGTGTCATGGTTCGGCGGCGCC
AATAGTTTCTTGGGAATTTCTTACATAGTGGTGGGATCCCTATGTCTCTT
CCTGGCCGCTCTTTTCGGAATCAAACAAGCCACGTGCCCGCGCAAACTGG
GGGATACGCGATATTTGGGATGGAAAGAACAGTAG
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protein sequence of rna498

>rna498-protein ID=rna498-protein|Name=rna498|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
MTVFEVTPPRIRGIFRGESSHEEANVWAPSRSPTGRIFVGAGSNSGSHRM
ATVSPSPVDNGGSSNDSTPRSRDSQDGSVGRYYSESEGTDRSSRAVSSGI
ASIYIAGTSSGGSEGGGEVVFALARGVATVVTLSALALVMVLLIVAEAVL
MLVAEKIGLAPVVILVLTIMFIVGRQMGVPFQSLARVLVFLWAF
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mRNA from alignment at CM002455.1:1248740..1249782-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna498 ID=rna498|Name=rna498|organism=Nannochloropsis gaditana|type=mRNA|length=1043bp|location=Sequence derived from alignment at CM002455.1:1248740..1249782- (Nannochloropsis gaditana)
GGCAGATGTGTTCGTGCCGTATCTCCCTGGGAACCAAACCGCATGTTTAA
CGTCGATGGTGTCCCGTTCAAGAGTTAAGCCCTTTCCGAGAGCTTACTTT
GACGCACTCCTGACAATTATCTCCTTATTTTTGGAATCCCCCCTCTAGTT
TATCCTATAGAACTGTATGACAGTGTTCGAGGTGACGCCTCCACGGATTC
GCGGTATATTTCGTGGTGAAAGCTCCCACGAGGAAGCCAACGTCTGGGCC
CCAAGCCGGTCACCCACAGGACGCATTTTTGTCGGCGCAGGTTCGAATTC
CGGCTCTCACCGCATGGCTACCGTAAGTCCGAGTCCTGTTGACAATGGTG
GCAGCAGCAATGACAGCACTCCACGCAGCAGGGACAGTCAAGATGGCAGC
GTGGGGCGGTATTACAGCGAGAGTGAAGGAACTGACAGGAGTTCCAGGGC
TGTGAGTTCGGGAATCGCAAGCATCTATATCGCGGGGACCTCCAGTGGAG
GAAGTGAAGGCGGGGGAGAGGTTGTTTTTGCATTGGCAAGAGGGGTAGCC
ACTGTGGTGACGTTGTCTGCACTGGCGTTGGTAATGGTGTTGCTGATTGT
CGCGGAGGCAGTGTTGATGCTAGTAGCTGAGAAAATCGGACTGGCGCCTG
TGGTAATTTTGGTCTTGACCATAATGTTTATAGTGGGGCGACAGATGGGT
GTGCCCTTCCAGTCCCTGGCACGTGTTTTGGTCTTCTTGTGGGCGTTTTA
GGGTCCCGCGCCTGCTGCTGAAGCATCCAGGCCCTCTGGATCTCTTTTTA
GTGACGTTTTTTTTTTGTACACTATATTCGAATACGCTCGAATTTCCTTG
TAGTATACAATCTGATACGCTCGAGCAAGTCGGAAAGGAAAAGTAGGTAG
GATACTGCCTGGTGATCGTGTTCCGTGTAAGCATGTTGAAGCGTACGCAG
TTGTATAGTGGTGTCTGCATGGTCGTGAACCTCATGTACTTCTACCCCTA
CCCTTGCAGGGAAAGTAAAAATATGAGAAATTGCAGACTGAAC
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Coding sequence (CDS) from alignment at CM002455.1:1248740..1249782-

>rna498 ID=rna498|Name=rna498|organism=Nannochloropsis gaditana|type=CDS|length=585bp|location=Sequence derived from alignment at CM002455.1:1248740..1249782- (Nannochloropsis gaditana)
ATGACAGTGTTCGAGGTGACGCCTCCACGGATTCGCGGTATATTTCGTGG
TGAAAGCTCCCACGAGGAAGCCAACGTCTGGGCCCCAAGCCGGTCACCCA
CAGGACGCATTTTTGTCGGCGCAGGTTCGAATTCCGGCTCTCACCGCATG
GCTACCGTAAGTCCGAGTCCTGTTGACAATGGTGGCAGCAGCAATGACAG
CACTCCACGCAGCAGGGACAGTCAAGATGGCAGCGTGGGGCGGTATTACA
GCGAGAGTGAAGGAACTGACAGGAGTTCCAGGGCTGTGAGTTCGGGAATC
GCAAGCATCTATATCGCGGGGACCTCCAGTGGAGGAAGTGAAGGCGGGGG
AGAGGTTGTTTTTGCATTGGCAAGAGGGGTAGCCACTGTGGTGACGTTGT
CTGCACTGGCGTTGGTAATGGTGTTGCTGATTGTCGCGGAGGCAGTGTTG
ATGCTAGTAGCTGAGAAAATCGGACTGGCGCCTGTGGTAATTTTGGTCTT
GACCATAATGTTTATAGTGGGGCGACAGATGGGTGTGCCCTTCCAGTCCC
TGGCACGTGTTTTGGTCTTCTTGTGGGCGTTTTAG
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Synonyms
Publications