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Properties
| Property Name | Value |
|---|
| Product | Arrestin-like protein |
| Orig transcript id | gnl|cribi|Naga_100087g17.1112.mrna |
| Orig protein id | gnl|cribi|Naga_100087g17.1112 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:732968..735024 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4946 ID=rna4946|Name=rna4946|organism=Nannochloropsis gaditana|type=mRNA|length=1314bp
ATGATCCGTCTGCGTGTAAAGTCCTTGTCAGAGCTGCGAGAAAAACATCA
GGCTGGCGACTATGTCTCAGGAACGGTATTCAGCACGCCAGAGGGCAGCT
TTACCATCAGTCTATACCCTACGGGTGATAAGCTCAGCAACCCCGGCTTC
ATCGGCGTCTACCTGACCTGCCTCTCTCTCAAAAACCCGGCCCTCCGCGG
CATCCGGGTAGGGGCCACCTGGAACCTCCTCTCCGAGGAGGGCGTCCTCA
TCACTTCGCGCCACGAGAAGCTCACGCCCATCCTCCTCACGCCCGATCCG
GGCGACGACCCGCAGCTGGGAAAGGGCCGGGGGTACACGAACTTCTACCG
GCCCCCTCCGGACTTGGAGACCTTCACGCTGACCTGCGACTTCGTCGTCC
GGGAGGTGGTGCGGGAGGACGCAGGGGGGGGGCTGGGCCCAGGGAACAAG
GGAGGGGAGGGAGGGATGGAGGGGGGGGCACGGAGGGGGGGCGGGGGAGG
GGCGTTGATGATGGAAGGGTCTGTGGACGGCTTGCTCGCGACCGTCCGGC
GAGTGCACGAGCGGGAGCTCGAACGGAGTCGACGGGCGCGGGTGCTGGCC
GTGGAGGAGCTGGTGGAGTTGACCCAGGAGGATCTCCTGAAGCTGCAGGA
GAACTTGGCGGGGGCGCTGACTAAGAAATGCGAGATGGACCGGCATTGCT
CCATTTGCCTGGAGCGGCAGAAGGATCATGTCTGCGTCCCTTGCGGGCAT
CGGTACTGTGGTCCCTGCATCGCCCAAGTGGATCGATGCGCCGAGTGCCG
GGAGAGGATTTCGCAGAAACTGAAGTGCAATGGGTGGCTGTGTGGGCAAT
CGGAGACCTTTCAAAACATCCGTGCGCACATACGAGTGTCTGATGGGGTT
GAGGCGCAGAACGGGAAGAGTAGAGGGACTTGGAAGGTAAAGGAGGCCTC
AGCACAGAAGGGAGTCACGGCCTCTAGGCAAGGCTGGCATGAGGCGAGAC
GGCTGGGGTTTGTACATAGGGTGGTGTGCGTCTGTTTGGCGAAGCGAGGG
GTCTGGAGGCCGCGGGAAGTCTTGTTAGGGAGAGGAGGAGGGACCCAAGA
CGACCTTAATGTGTTTCAAGCGCAAGTGGGGGCCAAAGAACATCAGGTCC
CCGCTCGACCGCCGCGGTATGGAGAAAGATTGGAAATGGAACGAGCTCAG
GTGCTTTCACGTCCTGACAAACTAATCAAAGAAATTGATGGTCCATGCGA
GCTTCCCCCATTTCCGTCCCACGCAGGGAGGCAGGAGGCATATCTTTGGC
GCTCTTTTAAATGA back to topprotein sequence of rna4946 >rna4946-protein ID=rna4946-protein|Name=rna4946|organism=Nannochloropsis gaditana|type=polypeptide|length=393bp
MGNAGSNGNVSLGVETEKMAYMAGETVKGTVSVLIAVETQTTGVFLRVKG
LEKVYFTERRSGRDMEDRDRTLQDEVSFFDVKMPLLTAQAGVLGPGQYQI
PFSFALPDSLPGTLPEEEGVSGSESYRCSVEYEVLAYVDIPGLLSSNVQH
RRLLTVTAAMNPWSVQSGAVEKTNKVCLLCCIPRGEVWMRASMPQSHYRP
GETASLVVDIHNRSPAAVRHVTVRLLRRLRLGTRSSGWVYYNSDVLTSLK
LAGLRPGQQRMDQAAEKLGLVLASTDGKPLTAEVLGSIVECTYVVEVTAK
VNWAPLMAIEIPIHVYHGASPPPSSLPETHRHEPLPPLPTATAVPFHPIL
LDAVDIPLASVTSAPASASTVQPISVLPSAPSLRGGREGKSLE back to topmRNA from alignment at CM002464.1:732968..735024+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4946 ID=rna4946|Name=rna4946|organism=Nannochloropsis gaditana|type=mRNA|length=2057bp|location=Sequence derived from alignment at CM002464.1:732968..735024+ (Nannochloropsis gaditana)
TCGCTCGTATCACTGTTGTATGATCGTAAACGATGATGACAGCCACTGGA
ACTACGACAAGATGGCAAGGTTCAAGTAAAGCAAGCCTTGTTGACTTGAA
AGGGAGACAGCATGAAGCGAGAGGCGAGCGCAGGCTGATAATTTGCTCGT
AGCAATTAATTCGCGCCTCTAATATAACCCCTCGAATTATTGCTTCTTAA
AATTTTACCTGTCGCCTGACATGAATACAACTTATAACGGGGTCAGGGGG
AGCGGTGAGCGGAAGCTGCTTTAAGGGAGTGGTTTGCTGTTTAGCCCCGG
GTGCTGCcaagtggaaggggagagggatcgTATcttgcttctctccctcc
ttgctacGAAGTGCACAATGGGCAATGCGGGGAGCAACGGGAATGTGTCT
TTGGGCGTGGAGACAGAAAAAATGGCCTACATGGCTGGTGAAACCGTCAA
GGGGACCGTCTCTGTTTTGATAGCTGTCGAGACACAGGTAATTTAATGTG
CAGGGCccatctcttctccttctcccgctctctTACCCACGACGATCATG
GGGATAATATCGGTTTATGTACCCATGCATGTATTTGACAACTTTAACAA
TTTTCACTTCTTTCAAGTATCAAACCCAATGTATACCCTGCGCTGACTTA
CATAACGTATTGCCAATCCATTTCCTCTCTATTATCGCCTGTCCCCGTCT
TTTCCAGACTACGGGGGTTTTCCTTCGAGTGAAAGGCCTCGAAAAAGTAT
ATTTTACGGAACGCCGCTCAGgaagggacatggaggaTCGGGACAGGACA
TTGCAGGACGAAGTCAGTTTTTTCGACGTGAAAATGCCCTTGCTCACAGC
TCAAGCCGGCGTCCTTGGCCCCGGGCAATACCAaattcccttctccttcg
cgcTCCCTGACTCCCTGCCAGGCACCCTTccagaagaggaaggggtcagT
GGAAGCGAATCGTACCGCTGCTCTGTTGAGTATGAGGTTTTAGCCTACGT
GGATATTCCTGGACTTCTCTCCAGCAACGTGCAGCACCGGCGGCTGTTGA
CAGTGACCGCGGCCATGAACCCATGGTCCGTGCAAAGCGGGGCCGTAGAG
AAGACAAACAAGGTGTGCTTGCTCTGCTGCATTCCTCGGGGCGAGGTCTG
GATGCGTGCGTCTATGCCCCAGTCCCATTACCGGCCTGGGGAGACTGCCA
GCCTGGTGGTTGACATCCACAACCGCTCTCCGGCTGCCGTGCGTCACGTC
ACGGTCCGTCTCCTCAGGCGCCTTCGCTTGGGTACGCGCAGCAGTGGCTG
GGTTTACTACAATTCGGACGTCCTGACCTCTCTGAAGCTTGCAGGGCTCC
GCCCCGGGCAGCAACGCATGGACCAAGCCGCCGAGAAGCTAGGCTTGGTC
TTAGCCTCGACAGATGGGAAGCCTCTGACCGCAGAGGTGCTGGGGAGCAT
CGTCGAGTGCACCTACGTGGTCGAAGTAACGGCTAAGGTCAATTGGGCCC
CTTTGATGGCCATCGAAATTCCCATTCATGTCTATCACGgggcctcgcct
cctccctcctctttgcccgAGACCCATCGCCACGAgcctttgccccccct
cccgaccgcGACTGCTGTCCCTTTTCACCCTATCCTTCTGGACGCCGTCG
ACATCCCCTTGGCAAGTGTCACCTCCGCGCCTGCCTCTGCGAGCACTGTC
CAGCCAATATCGGTGTTGCCCTCGGCGCCATCCCtgcgaggggggcggga
ggggaaaagttTGGAATaggaaggggacgggggggatgTCTGtgtaggag
ggagagggtcccTGTGGCAAACGTTATCGGATCTGCTTCTTTGTAAATGT
AAATGACTCATATGACTGAATGGTATGTTGGAAATGGACAAGGCGGTGTA
AGGCAGAGGGGCAAAGGGATCTCTACAGCATCCAGGGTCTTGTCTTGGCC
CTCAaagcttcttcttttccgagTTGCTCTATTCTTTCCGCTCCCACGCA
GACGCAGAATGATACATACTAACCTACAAAGGCTTTCGCACGCTTTTCCG
TTGTGCC back to topCoding sequence (CDS) from alignment at CM002464.1:732968..735024+ >rna4946 ID=rna4946|Name=rna4946|organism=Nannochloropsis gaditana|type=CDS|length=2364bp|location=Sequence derived from alignment at CM002464.1:732968..735024+ (Nannochloropsis gaditana)
ATGGGCAATGCGGGGAGCAACGGGAATGTGTCTTTGGGCGTGGAGACAGA
AAAAATGGCCTACATGGCTGGTGAAACCGTCAAGGGGACCGTCTCTGTTT
TGATAGCTGTCGAGACACAGACTACGGGGGTTTTCCTTCGAGTGAAAGGC
CTCGAAAAAGTATATTTTACGGAACGCCGCTCAGgaagggacatggagga
TCGGGACAGGACATTGCAGGACGAAGTCAGTTTTTTCGACGTGAAAATGC
CCTTGCTCACAGCTCAAGCCGGCGTCCTTGGCCCCGGGCAATACCAaatt
cccttctccttcgcgcTCCCTGACTCCCTGCCAGGCACCCTTccagaaga
ggaaggggtcagTGGAAGCGAATCGTACCGCTGCTCTGTTGAGTATGAGG
TTTTAGCCTACGTGGATATTCCTGGACTTCTCTCCAGCAACGTGCAGCAC
CGGCGGCTGTTGACAGTGACCGCGGCCATGAACCCATGGTCCGTGCAAAG
CGGGGCCGTAGAGAAGACAAACAAGGTGTGCTTGCTCTGCTGCATTCCTC
GGGGCGAGGTCTGGATGCGTGCGTCTATGCCCCAGTCCCATTACCGGCCT
GGGGAGACTGCCAGCCTGGTGGTTGACATCCACAACCGCTCTCCGGCTGC
CGTGCGTCACGTCACGGTCCGTCTCCTCAGGCGCCTTCGCTTGGGTACGC
GCAGCAGTGGCTGGGTTTACTACAATTCGGACGTCCTGACCTCTCTGAAG
CTTGCAGGGCTCCGCCCCGGGCAGCAACGCATGGACCAAGCCGCCGAGAA
GCTAGGCTTGGTCTTAGCCTCGACAGATGGGAAGCCTCTGACCGCAGAGG
TGCTGGGGAGCATCGTCGAGTGCACCTACGTGGTCGAAGTAACGGCTAAG
GTCAATTGGGCCCCTTTGATGGCCATCGAAATTCCCATTCATGTCTATCA
CGgggcctcgcctcctccctcctctttgcccgAGACCCATCGCCACGAgc
ctttgccccccctcccgaccgcGACTGCTGTCCCTTTTCACCCTATCCTT
CTGGACGCCGTCGACATCCCCTTGGCAAGTGTCACCTCCGCGCCTGCCTC
TGCGAGCACTGTCCAGCCAATATCGGTGTTGCCCTCGGCGCCATCCCtgc
gaggggggcgggaggggaaaagttTGGAATagATGGGCAATGCGGGGAGC
AACGGGAATGTGTCTTTGGGCGTGGAGACAGAAAAAATGGCCTACATGGC
TGGTGAAACCGTCAAGGGGACCGTCTCTGTTTTGATAGCTGTCGAGACAC
AGACTACGGGGGTTTTCCTTCGAGTGAAAGGCCTCGAAAAAGTATATTTT
ACGGAACGCCGCTCAGgaagggacatggaggaTCGGGACAGGACATTGCA
GGACGAAGTCAGTTTTTTCGACGTGAAAATGCCCTTGCTCACAGCTCAAG
CCGGCGTCCTTGGCCCCGGGCAATACCAaattcccttctccttcgcgcTC
CCTGACTCCCTGCCAGGCACCCTTccagaagaggaaggggtcagTGGAAG
CGAATCGTACCGCTGCTCTGTTGAGTATGAGGTTTTAGCCTACGTGGATA
TTCCTGGACTTCTCTCCAGCAACGTGCAGCACCGGCGGCTGTTGACAGTG
ACCGCGGCCATGAACCCATGGTCCGTGCAAAGCGGGGCCGTAGAGAAGAC
AAACAAGGTGTGCTTGCTCTGCTGCATTCCTCGGGGCGAGGTCTGGATGC
GTGCGTCTATGCCCCAGTCCCATTACCGGCCTGGGGAGACTGCCAGCCTG
GTGGTTGACATCCACAACCGCTCTCCGGCTGCCGTGCGTCACGTCACGGT
CCGTCTCCTCAGGCGCCTTCGCTTGGGTACGCGCAGCAGTGGCTGGGTTT
ACTACAATTCGGACGTCCTGACCTCTCTGAAGCTTGCAGGGCTCCGCCCC
GGGCAGCAACGCATGGACCAAGCCGCCGAGAAGCTAGGCTTGGTCTTAGC
CTCGACAGATGGGAAGCCTCTGACCGCAGAGGTGCTGGGGAGCATCGTCG
AGTGCACCTACGTGGTCGAAGTAACGGCTAAGGTCAATTGGGCCCCTTTG
ATGGCCATCGAAATTCCCATTCATGTCTATCACGgggcctcgcctcctcc
ctcctctttgcccgAGACCCATCGCCACGAgcctttgccccccctcccga
ccgcGACTGCTGTCCCTTTTCACCCTATCCTTCTGGACGCCGTCGACATC
CCCTTGGCAAGTGTCACCTCCGCGCCTGCCTCTGCGAGCACTGTCCAGCC
AATATCGGTGTTGCCCTCGGCGCCATCCCtgcgaggggggcgggagggga
aaagttTGGAATag back to top
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