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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100087g18.1115.mrna |
| Orig protein id | gnl|cribi|Naga_100087g18.1115 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:730815..732327 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4945 ID=rna4945|Name=rna4945|organism=Nannochloropsis gaditana|type=mRNA|length=1650bp
CCCCCAGCGGATGGGGCGAGGTCCCCCGTACACAGCGTGGATGGATGGCT
TTTCACGGAGGCGCGTCTCTGTGACCTTTGTCAGAAACTAATCGTTTCCC
TCACCCTCTGGAGCTGGGCGTGACTGATTTTCCACGTTCTGCACGCTTCA
GGCACGCATTGTGGGACCTGGAGGCAGGGGGGGACGGGGAAGGAGAACAT
TCAGTCCTTCCAAAGCGATGGGGCTTCAACCGGGATTGGAAAGGCCCACC
TTCCGGCGACCTATTTTGCCATCCTACCTTTATTTCCTCCTTTTCTCCAT
GCAGCCAATTATCGCCACGAGTTTCTCCGCAGGCACTCTCACCAGCCTGA
CACCTCAAAATCCCCCTCCCCCTGCCAGTGGGGTGAGCGTGAGGAAGACA
CCACGGCAGTTCCTAATGGAACGCCCTCCCGGTCCTTACACATGTTTGCG
GGCTCGAGACGAGTCTCTACTAGGTTTTGACTTTCATTTCCAACGATTAT
TGCACGGGATTGAGTCCTCGGTCGGGTGTATGAGCCCTGTGAATGCAGGG
GAGTTGCGGAAGCGTGTGTTAAATGTGATCGAAGAGGCATTGACGGAGGC
ATCGCAGCAACACCCTAGTGAAGACGGGAAAGAAGGGTCGACGGGGTCGA
CTGAAAAATTGAGAGATTTTTTTGTGACGGTGCACATTGACGAGTCATCC
ATCGTGTTACCTTCCTCCACCTCGGGCGTGGCTTTGAGCGCGCACGCGGT
GTCCATGCCGTACGCCGTCATGCCGCCACCCGTTACCTTGGAAATCCGAG
GTGAAGGACGGAGGTCGCCGGACGTTAAGCATTCGCAGTGGCTGAGGGAC
CGACAAGGCCTGGAGCGCTTCCGTGTCGGGCCAGGGGGCGAAGTTGCCCT
TTCCCGGTCACTACCAGCGGGACGGGGGGAGGAAGAAGGGAAGGCGGGGA
AGGCCGGAAGGGAGGTGCTCGAGGGTCTGGTAAGCAACATCTTTGTGGTC
AAGGGTGGGAAGCTTCTGACTGCGAGCGATGGGATTTTGCCAGGGCACAT
GCGTACCATGGCGTTGAGAGCCGCGGAGGCACTGGGCGTGCCCGTGGGCG
ATCCGGAGGAGAAAATATTGTTAGAGGACATCTTGGAGTGGGAGGAGGCG
TTTCTGACGGGCTCAGGACGCGTTCTGGTGCCGATCGGGAGGGTGGAAGG
GACCAGCGTGGGTCTTCCCCCGGTGGATTTAGCGGCCGCGCCGGGGCCCA
TCACCAACCTGGTGCGTGCCCGCTTGTTGTACGATATGGAGGATGGCTGG
GAAAACCTCAGGTCGCTGGCAAGCCGTTGAGCAAGAGGTAAAGGAGGGCA
AGATTGCCTCTAGATATGGACAGAACGTTTTGTTTAGTCGGTGGAAATAC
AATACGCTGATGGAAAGGAAAAGGAGATTACAAATTGATTCGATGAAATA
ACGGACGCAGGGTGACGAAGTCCCTTCTAGATATTGATTGTTCTGTCTCG
GGCGGGGTCCTCCGCATCCTTGTCATTTAAAAGAGCGCCAAAGATATGCC
TCCTGCCTCCCTGCGTGGGACGGAAATGGGGGAAGCTCGCATGGACCATC
AATTTCTTTGATTAGTTTGTCAGGACGTGAAAGCACCTGAGCTCGTTCCA back to topprotein sequence of rna4945 >rna4945-protein ID=rna4945-protein|Name=rna4945|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MIRLRVKSLSELREKHQAGDYVSGTVFSTPEGSFTISLYPTGDKLSNPGF
IGVYLTCLSLKNPALRGIRVGATWNLLSEEGVLITSRHEKLTPILLTPDP
GDDPQLGKGRGYTNFYRPPPDLETFTLTCDFVVREVVREDAGGGLGPGNK
GGEGGMEGGARRGGGGGALMMEGSVDGLLATVRRVHERELERSRRARVLA
VEELVELTQEDLLKLQENLAGALTKKCEMDRHCSICLERQKDHVCVPCGH
RYCGPCIAQVDRCAECRERISQKLKCNGWLCGQSETFQNIRAHIRVSDGV
EAQNGKSRGTWKVKEASAQKGVTASRQGWHEARRLGFVHRVVCVCLAKRG
VWRPREVLLGRGGGTQDDLNVFQAQVGAKEHQVPARPPRYGERLEMERAQ
VLSRPDKLIKEIDGPCELPPFPSHAGRQEAYLWRSFK back to topmRNA from alignment at CM002464.1:730815..732327- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4945 ID=rna4945|Name=rna4945|organism=Nannochloropsis gaditana|type=mRNA|length=1513bp|location=Sequence derived from alignment at CM002464.1:730815..732327- (Nannochloropsis gaditana)
ATGATCCGTCTGCGTGTAAAGTCCTTGTCAGAGCTGCGAGAAAAACATCA
GGCTGGCGACTATGTCTCAGGAACGGTATTCAGCACGCCAGAGGGCAGCT
TTACCATCAGGTAAGCTGCGTCTCGGCAGTCTTTCTCCGCCATCTCCCCC
CTCCGCCTCCCCTCCCTCCCCCCCCCCTTAGCATTGGCCCCTCGTCCATC
CTCCCACCGCCATCCCCTTGCACCCCCCCAGTCTATACCCTACGGGTGAT
AAGCTCAGCAACCCCGGCTTCATCGGCGTCTACCTGACCTGCCTCTCTCT
CAAAAACCCGGCCCTCCGCGGCATCCGGGTAGGGGCCACCTGGAACCTCC
TCTCCGAGGAGGGCGTCCTCATCACTTCGCGCCACGAGAAGCTCACGCCC
ATCCTCCTCACGCCCGATCCGGGCGACGACCCGCAGCTGGGAAAGGGCCG
GGGGTACACGAACTTCTACCGGCCCCCTCCGGACTTGGAGACCTTCACGC
TGACCTGCGACTTCGTCGTCCGGGAGGTGGTGCGGGAGGACGCAGGGGGG
GGGCTGGGCCCAGGGAACAAGGGAGGGGAGGGAGGGATGGAGGGGGGGGC
ACGGAGGGGGGGCGGGGGAGGGGCGTTGATGATGGAAGGGTCTGTGGACG
GCTTGCTCGCGACCGTCCGGCGAGTGCACGAGCGGGAGCTCGAACGGAGT
CGACGGGCGCGGGTGCTGGCCGTGGAGGAGCTGGTGGAGTTGACCCAGGA
GGATCTCCTGAAGCTGCAGGAGAACTTGGCGGGGGCGCTGACTAAGAAAT
GCGAGATGGACCGGCATTGCTCCATTTGCCTGGAGCGGCAGAAGGATCAT
GTCTGCGTCCCTTGCGGGCATCGGTACTGTGGTCCCTGCATCGCCCAAGT
GGATCGATGCGCCGAGTGCCGGGAGAGGATTTCGCAGAAACTGAAGTGTT
TTTGACGACGAGGGGGGTAAAGCGAGGATAGGGGCTTGAGGGGGCGAAGA
AAGGGAGGGGAAGGGGGGACTGTAGGCAATGGGTGGCTGTGTGGGCAATC
GGAGACCTTTCAAAACATCCGTGCGCACATACGAGTGTCTGATGGGGTTG
AGGCGCAGAACGGGAAGAGTAGAGGGACTTGGAAGGTAAAGGAGGCCTCA
GCACAGAAGGGAGTCACGGCCTCTAGGCAAGGCTGGCATGAGGCGAGACG
GCTGGGGTTTGTACATAGGGTGGTGTGCGTCTGTTTGGCGAAGCGAGGGG
TCTGGAGGCCGCGGGAAGTCTTGTTAGGGAGAGGAGGAGGGACCCAAGAC
GACCTTAATGTGTTTCAAGCGCAAGTGGGGGCCAAAGAACATCAGGTCCC
CGCTCGACCGCCGCGGTATGGAGAAAGATTGGAAATGGAACGAGCTCAGG
TGCTTTCACGTCCTGACAAACTAATCAAAGAAATTGATGGTCCATGCGAG
CTTCCCCCATTTCCGTCCCACGCAGGGAGGCAGGAGGCATATCTTTGGCG
CTCTTTTAAATGA back to topCoding sequence (CDS) from alignment at CM002464.1:730815..732327- >rna4945 ID=rna4945|Name=rna4945|organism=Nannochloropsis gaditana|type=CDS|length=3942bp|location=Sequence derived from alignment at CM002464.1:730815..732327- (Nannochloropsis gaditana)
GCAATGGGTGGCTGTGTGGGCAATCGGAGACCTTTCAAAACATCCGTGCG
CACATACGAGTGTCTGATGGGGTTGAGGCGCAGAACGGGAAGAGTAGAGG
GACTTGGAAGGTAAAGGAGGCCTCAGCACAGAAGGGAGTCACGGCCTCTA
GGCAAGGCTGGCATGAGGCGAGACGGCTGGGGTTTGTACATAGGGTGGTG
TGCGTCTGTTTGGCGAAGCGAGGGGTCTGGAGGCCGCGGGAAGTCTTGTT
AGGGAGAGGAGGAGGGACCCAAGACGACCTTAATGTGTTTCAAGCGCAAG
TGGGGGCCAAAGAACATCAGGTCCCCGCTCGACCGCCGCGGTATGGAGAA
AGATTGGAAATGGAACGAGCTCAGGTGCTTTCACGTCCTGACAAACTAAT
CAAAGAAATTGATGGTCCATGCGAGCTTCCCCCATTTCCGTCCCACGCAG
GGAGGCAGGAGGCATATCTTTGGCGCTCTTTTAAATGATCTATACCCTAC
GGGTGATAAGCTCAGCAACCCCGGCTTCATCGGCGTCTACCTGACCTGCC
TCTCTCTCAAAAACCCGGCCCTCCGCGGCATCCGGGTAGGGGCCACCTGG
AACCTCCTCTCCGAGGAGGGCGTCCTCATCACTTCGCGCCACGAGAAGCT
CACGCCCATCCTCCTCACGCCCGATCCGGGCGACGACCCGCAGCTGGGAA
AGGGCCGGGGGTACACGAACTTCTACCGGCCCCCTCCGGACTTGGAGACC
TTCACGCTGACCTGCGACTTCGTCGTCCGGGAGGTGGTGCGGGAGGACGC
AGGGGGGGGGCTGGGCCCAGGGAACAAGGGAGGGGAGGGAGGGATGGAGG
GGGGGGCACGGAGGGGGGGCGGGGGAGGGGCGTTGATGATGGAAGGGTCT
GTGGACGGCTTGCTCGCGACCGTCCGGCGAGTGCACGAGCGGGAGCTCGA
ACGGAGTCGACGGGCGCGGGTGCTGGCCGTGGAGGAGCTGGTGGAGTTGA
CCCAGGAGGATCTCCTGAAGCTGCAGGAGAACTTGGCGGGGGCGCTGACT
AAGAAATGCGAGATGGACCGGCATTGCTCCATTTGCCTGGAGCGGCAGAA
GGATCATGTCTGCGTCCCTTGCGGGCATCGGTACTGTGGTCCCTGCATCG
CCCAAGTGGATCGATGCGCCGAGTGCCGGGAGAGGATTTCGCAGAAACTG
AAGTATGATCCGTCTGCGTGTAAAGTCCTTGTCAGAGCTGCGAGAAAAAC
ATCAGGCTGGCGACTATGTCTCAGGAACGGTATTCAGCACGCCAGAGGGC
AGCTTTACCATCAGGCAATGGGTGGCTGTGTGGGCAATCGGAGACCTTTC
AAAACATCCGTGCGCACATACGAGTGTCTGATGGGGTTGAGGCGCAGAAC
GGGAAGAGTAGAGGGACTTGGAAGGTAAAGGAGGCCTCAGCACAGAAGGG
AGTCACGGCCTCTAGGCAAGGCTGGCATGAGGCGAGACGGCTGGGGTTTG
TACATAGGGTGGTGTGCGTCTGTTTGGCGAAGCGAGGGGTCTGGAGGCCG
CGGGAAGTCTTGTTAGGGAGAGGAGGAGGGACCCAAGACGACCTTAATGT
GTTTCAAGCGCAAGTGGGGGCCAAAGAACATCAGGTCCCCGCTCGACCGC
CGCGGTATGGAGAAAGATTGGAAATGGAACGAGCTCAGGTGCTTTCACGT
CCTGACAAACTAATCAAAGAAATTGATGGTCCATGCGAGCTTCCCCCATT
TCCGTCCCACGCAGGGAGGCAGGAGGCATATCTTTGGCGCTCTTTTAAAT
GATCTATACCCTACGGGTGATAAGCTCAGCAACCCCGGCTTCATCGGCGT
CTACCTGACCTGCCTCTCTCTCAAAAACCCGGCCCTCCGCGGCATCCGGG
TAGGGGCCACCTGGAACCTCCTCTCCGAGGAGGGCGTCCTCATCACTTCG
CGCCACGAGAAGCTCACGCCCATCCTCCTCACGCCCGATCCGGGCGACGA
CCCGCAGCTGGGAAAGGGCCGGGGGTACACGAACTTCTACCGGCCCCCTC
CGGACTTGGAGACCTTCACGCTGACCTGCGACTTCGTCGTCCGGGAGGTG
GTGCGGGAGGACGCAGGGGGGGGGCTGGGCCCAGGGAACAAGGGAGGGGA
GGGAGGGATGGAGGGGGGGGCACGGAGGGGGGGCGGGGGAGGGGCGTTGA
TGATGGAAGGGTCTGTGGACGGCTTGCTCGCGACCGTCCGGCGAGTGCAC
GAGCGGGAGCTCGAACGGAGTCGACGGGCGCGGGTGCTGGCCGTGGAGGA
GCTGGTGGAGTTGACCCAGGAGGATCTCCTGAAGCTGCAGGAGAACTTGG
CGGGGGCGCTGACTAAGAAATGCGAGATGGACCGGCATTGCTCCATTTGC
CTGGAGCGGCAGAAGGATCATGTCTGCGTCCCTTGCGGGCATCGGTACTG
TGGTCCCTGCATCGCCCAAGTGGATCGATGCGCCGAGTGCCGGGAGAGGA
TTTCGCAGAAACTGAAGTATGATCCGTCTGCGTGTAAAGTCCTTGTCAGA
GCTGCGAGAAAAACATCAGGCTGGCGACTATGTCTCAGGAACGGTATTCA
GCACGCCAGAGGGCAGCTTTACCATCAGGCAATGGGTGGCTGTGTGGGCA
ATCGGAGACCTTTCAAAACATCCGTGCGCACATACGAGTGTCTGATGGGG
TTGAGGCGCAGAACGGGAAGAGTAGAGGGACTTGGAAGGTAAAGGAGGCC
TCAGCACAGAAGGGAGTCACGGCCTCTAGGCAAGGCTGGCATGAGGCGAG
ACGGCTGGGGTTTGTACATAGGGTGGTGTGCGTCTGTTTGGCGAAGCGAG
GGGTCTGGAGGCCGCGGGAAGTCTTGTTAGGGAGAGGAGGAGGGACCCAA
GACGACCTTAATGTGTTTCAAGCGCAAGTGGGGGCCAAAGAACATCAGGT
CCCCGCTCGACCGCCGCGGTATGGAGAAAGATTGGAAATGGAACGAGCTC
AGGTGCTTTCACGTCCTGACAAACTAATCAAAGAAATTGATGGTCCATGC
GAGCTTCCCCCATTTCCGTCCCACGCAGGGAGGCAGGAGGCATATCTTTG
GCGCTCTTTTAAATGATCTATACCCTACGGGTGATAAGCTCAGCAACCCC
GGCTTCATCGGCGTCTACCTGACCTGCCTCTCTCTCAAAAACCCGGCCCT
CCGCGGCATCCGGGTAGGGGCCACCTGGAACCTCCTCTCCGAGGAGGGCG
TCCTCATCACTTCGCGCCACGAGAAGCTCACGCCCATCCTCCTCACGCCC
GATCCGGGCGACGACCCGCAGCTGGGAAAGGGCCGGGGGTACACGAACTT
CTACCGGCCCCCTCCGGACTTGGAGACCTTCACGCTGACCTGCGACTTCG
TCGTCCGGGAGGTGGTGCGGGAGGACGCAGGGGGGGGGCTGGGCCCAGGG
AACAAGGGAGGGGAGGGAGGGATGGAGGGGGGGGCACGGAGGGGGGGCGG
GGGAGGGGCGTTGATGATGGAAGGGTCTGTGGACGGCTTGCTCGCGACCG
TCCGGCGAGTGCACGAGCGGGAGCTCGAACGGAGTCGACGGGCGCGGGTG
CTGGCCGTGGAGGAGCTGGTGGAGTTGACCCAGGAGGATCTCCTGAAGCT
GCAGGAGAACTTGGCGGGGGCGCTGACTAAGAAATGCGAGATGGACCGGC
ATTGCTCCATTTGCCTGGAGCGGCAGAAGGATCATGTCTGCGTCCCTTGC
GGGCATCGGTACTGTGGTCCCTGCATCGCCCAAGTGGATCGATGCGCCGA
GTGCCGGGAGAGGATTTCGCAGAAACTGAAGTATGATCCGTCTGCGTGTA
AAGTCCTTGTCAGAGCTGCGAGAAAAACATCAGGCTGGCGACTATGTCTC
AGGAACGGTATTCAGCACGCCAGAGGGCAGCTTTACCATCAG back to top
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