rna4925, rna4925 (mRNA) Nannochloropsis gaditana

Overview
Namerna4925
Unique Namerna4925
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1718
Alignment locationCM002464.1:681862..682362 -

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Properties
Property NameValue
Product30s ribosomal protein s15
Orig transcript idgnl|cribi|Naga_100168g2.5622.mrna
Orig protein idgnl|cribi|Naga_100168g2.5622
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:681862..682362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100168g2gene4755Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25760.1cds4913Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4925rna4925-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4925 ID=rna4925|Name=rna4925|organism=Nannochloropsis gaditana|type=mRNA|length=1718bp
GCGCAGTGTTGAGGTACGGGGGGCGATGGACACGAAAATGAGCGGGGCAT
GGGGGCCAACGATCAGTCACTCCCCGCAACAGCTCTGCTGTAAAGACTAG
GAAGATGCATTCACGATCACTTTTTTTTTACGCTTACGCCATCGCCGACA
GGCACTTGACAGGAAAGGAAGACACTCTACCACGAATCCGAACCATACCA
TTGACAATTTGTCCCTCCTCCCGTAGATAGCAGCAAGAAGGGTGCATTGT
GAATGTGGCCTCGACCAGAGGACGCGGTTTCTAAGTTGTTTTAAGGAACA
GCCACTGCTGCGACAACAGATCAATCTGAATTTGTTCCGCTCTACGCCGA
TCCGTGTACTTCTGTTTCAGCCATAGGCACGCTGCCTAGGAAGGAATGGA
TGAGCTCGCTGCTCAAGAGCTTGAGATCCATGAGAATAAAGCGGGAGAAA
TTGTCCCCACACTACACTCTTTTGTGGCGGGGTGCGCAGGAGGGGTTGTT
TCCCTCGCTGTCGGCCAGCCCTTTGACACCATCAAAGTCCGTCTCCAAGC
CTCGACAAAATTCAAAGGCGCGATAGACTGTTTGCGACGACTCCTAGCGA
CAGAAGGGCCTCTGGCGCTTTTCAAGGGCATGTCTTCCCCGGTGCTCTCC
GCATCTTTTGTCAACGCCATCGTCTTCACGTCTTACAACGAGACCATGAC
ACTCATAAAAAAGACCGACCCGGAGGCTCGGAAGAGGCCCACCTACGAAC
AGGTCTTCTTGGCAGGCTCCGTGGCTGGCGCGCTTCAGTGCTCAGTGTTG
ACCCCCAGCGAGCTGATCAAATGCCGCCTGCAGACAGACATGACGCGGCC
CCGCTCCCAGGGCCTGCTCTCCTGCATCCGGGAGGTGTATCGGGAGGGCG
GATTGCGAGCTTTCTTCAACGGCTTCGGGCCCACCTTGGTCCGTGATTTA
CCTGCCTTCGGCTGTTACTTCGCCCTGTACGAGGTAGTCAAGGACAAGTT
GGAGGGCAGGGGAGCCTCCCCCTGGCTCTCTTCCTCCGTGGCGGGCGGGT
TCGCCGGTTGCTTCTCCTGGATCATCGTCTACCCTGTTGACGTAATTAAG
ACGGTGATGCAGACGCAGCGGGGAACTGGGCCAAGGCACGGGATGTTGGA
GACAGGGTTGAGGCTATGGAGGACAGAGGGCTTGGGCGTCTTCTTCCGGG
GAGCCTCGATCGCCATGGTGCGCGCATTGCCTGTCAACTGCATCGTCTTC
CCCGTCTACGAATGGACGGTGGAGTTTCTGGGAAAGATTGACAGCCTGCA
CAGCACGCGGTGGCCGGTCAAACTGCTCCCATCCGCCCCAGATGTCGGAG
AGACTGGCACCGGCGGCCTTAGGAATGTCGACTCCGACGGCGTGGATGCC
CGCACCGACGGCGAGAAGATCTCTGCCACATGAGCACTGTGGCGAATCTC
ACAAGAAAAGAATTGTAATTTATAGGCGCATGACCCTGTCCGCCCAAGCT
GAGATCCTTTAGAGAGATTAGGTGGCTGTTAAAGAAAGGCAAACTTTCTT
GACGTGCAACATCTTGGGAGGTTTACGAGTCCAACCTGTACAGAGGTCGA
AGTAGCTTAGCCTGTTTACATAGAGTGGAAGGGGAGATCCTGAAAGTTCT
TCTATTAGGCTGCCAGCCATATGTCCACTCAAAATAATGATGCTTCAACA
AACTGACCATCGTAACTT
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protein sequence of rna4925

>rna4925-protein ID=rna4925-protein|Name=rna4925|organism=Nannochloropsis gaditana|type=polypeptide|length=166bp
MWRQQLASLARLPSSSISSCKNGPTNRLLASSAASSEPLSPPSKSPSYKY
LIPGSLLQDAPNPVQRALSIENADAPERKQAEKQEFIEKFGVRPGDTGST
SVQVACLTVRIKHVKDHCNANKQDKAARRGYTALLTRRRTLMKYLRRKDF
ASYQNVIKELGLTGFT
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mRNA from alignment at CM002464.1:681862..682362-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4925 ID=rna4925|Name=rna4925|organism=Nannochloropsis gaditana|type=mRNA|length=501bp|location=Sequence derived from alignment at CM002464.1:681862..682362- (Nannochloropsis gaditana)
ATGTGGCGACAGCAACTAGCCTCCCTGGCGCGTCTCCCGTCCTCATCTAT
TTCTTCATGCAAGAATGGCCCCACCAACCGCCTGCTCGCCTCCTCCGCTG
CCTCTTCAGAGCCCCTTTCTCCGCCCAGTAAATCCCCTTCCTACAAATAT
TTGATCCCTGGAAGCCTTCTGCAAGACGCTCCGAACCCCGTGCAGCGGGC
GTTGAGCATAGAGAATGCGGACGCGCCCGAGCGAAAGCAAGCCGAGAAGC
AAGAGTTCATTGAAAAATTTGGAGTGCGACCAGGAGACACGGGATCGACC
TCTGTGCAGGTGGCATGTTTGACCGTGCGCATAAAGCACGTCAAGGACCA
CTGCAATGCAAACAAGCAGGACAAGGCAGCGCGTCGCGGTTATACAGCCT
TGCTGACCAGACGGCGCACCCTCATGAAGTATTTGCGGCGAAAAGACTTT
GCATCTTATCAAAACGTGATCAAGGAATTGGGCCTGACGGGTTTCACTTA
A
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Coding sequence (CDS) from alignment at CM002464.1:681862..682362-

>rna4925 ID=rna4925|Name=rna4925|organism=Nannochloropsis gaditana|type=CDS|length=501bp|location=Sequence derived from alignment at CM002464.1:681862..682362- (Nannochloropsis gaditana)
ATGTGGCGACAGCAACTAGCCTCCCTGGCGCGTCTCCCGTCCTCATCTAT
TTCTTCATGCAAGAATGGCCCCACCAACCGCCTGCTCGCCTCCTCCGCTG
CCTCTTCAGAGCCCCTTTCTCCGCCCAGTAAATCCCCTTCCTACAAATAT
TTGATCCCTGGAAGCCTTCTGCAAGACGCTCCGAACCCCGTGCAGCGGGC
GTTGAGCATAGAGAATGCGGACGCGCCCGAGCGAAAGCAAGCCGAGAAGC
AAGAGTTCATTGAAAAATTTGGAGTGCGACCAGGAGACACGGGATCGACC
TCTGTGCAGGTGGCATGTTTGACCGTGCGCATAAAGCACGTCAAGGACCA
CTGCAATGCAAACAAGCAGGACAAGGCAGCGCGTCGCGGTTATACAGCCT
TGCTGACCAGACGGCGCACCCTCATGAAGTATTTGCGGCGAAAAGACTTT
GCATCTTATCAAAACGTGATCAAGGAATTGGGCCTGACGGGTTTCACTTA
A
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Synonyms
Publications