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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100168g5.5629.mrna |
| Orig protein id | gnl|cribi|Naga_100168g5.5629 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:676048..677224 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4921 ID=rna4921|Name=rna4921|organism=Nannochloropsis gaditana|type=mRNA|length=4359bp
CCATGGCAGTAGTCTCCGGGGGAAGACTTTCTTGTGCTGGAACGAGTATG
CCGGACCACGACCGGTCCATGGGGTTTTCTAAGCCGATCAAGTACCCCGG
GTGGGATCAGGCAGAAGCTCCATGGACGACCACCGCATTGCCCAATGCAT
TGATACTTCCGCTTTTTCTGTTCACGGGGCGGCAGGCTGGTGTGCTGCGA
TGCGGGGTAGGGGCCCTCTTAGTTGGCACGTTTGCCGCGCTTGTACGCGT
CCAGCAAATCTCTTTGTGGTGGGGGATGCTTTTTCTCCCTCCGGCTCTGG
CATTGTTTTTGTCATCCTACGAAGTTGTCTTTTCCCGTCCCGACTGGGTG
GACCCGGAAGTTTTTGGGCGCAACAAACTCCCCGCCCACGCGCCGCTTGC
CTACCACACCAGCATCGAAGCCGCGCGCAAGGCCGCAATGTCCCACAGCC
TGCGATCGCAATCTGAGAACATTGTTTTGCTGAGTGGCCCCGCCAGCGCC
GGACAATGGCGCTTCAAATATGCCCCCAGCGTGTCGGCGGCCCCTCTGCA
CTTTGAGGACCCCGGCTTTCCTGCGGACGACTGGGACACGGACGTACCCG
TGCCTGGGAATTGGCAGCTGTGCAAGGACGCTTCCACAGGAGAGCCACGC
TTTGACATCCCCGTGTACACGAACTTCCGCTACCCCATCCCCCTGCACCC
TCCTTACGTCCCCCGGGAGAACCCGACGGGGTGCTACCGCCGGACCTTCG
ACGTCCCCGCCGCCTTGCTGGAAAAGGGAGGGCGTGCCCACCTCCTCTTC
CACGGCGCAGGCTCGGCCTTCCACGTGTGGGTGAACGGGAGCTTGGCAGG
CTACAGCCAGGACGGGAAGCTGGCTGCTGAATTCGACGTGACGGGGCTAG
TGCACCGGGACGGGCAGGGCAACGTGCTGGCGCTGCGGGTGCTGCGCTGG
TCGGACGGGTCTTACCTGGAGGACCAGGACCACTGGCGCTTGAGCGGGAT
CGAGAGGGACGTGGAGCTGGTCATGATCCCGGGGGCGGGAAGCGGTTTCA
GCCTCAGCGACTACACGGCGGTCGCGCGCCTGGACTCTCAGCACGAGCAC
GGCCACCTCGACGTGACGTTCCAGGTCGCCCGCCACCGGATCTTCCCGGG
GAGCTTTCAAGTCCAAGCGCTCTTGTACGAGGACTCGGAGGGGGGGGGCC
TGGTGGGCAAGGCTTCCGTGGTGAAGGACGGCACGTCGGCGGACGCAGCG
TCGGGCGCCTCCCCCACCGAGGTCTTCGTGTCCATTCCCGTCAAGAACCC
TCGGAAGTGGACCGCGGAGACGCCGCAGCTGTACACGCTGGTCCTGACCC
TGTCCACGGAAGGCCCGGGGGAGGGGAAGACGCCGTCGAAGTTGCAGCAG
GCGGAAGGGTGCCGGGTGGGATTCCGGACGGTTGAGATCAGAGACTCGCA
GCTTTGTGTGAACGGCCAGCCCCTGGTGGTGGCGGGCGTGAATCGGCACG
AGCACGATCCGGACACGGGGAAGGTCGTGGACGAGGCCTCCATGGTCCAG
GACATTGTCTTGCTGAAGCGCTACAATTTCAACGCCATCCGCGCCTCCCA
CTACCCGAACCACCCGCGCTGGTACGAGCTGTGCGACGAGCTGGGCATTT
GGGTGGTGGACGAGGCCAACGTGGAGACCCACGGCATGAAGCCCATCGGA
CGCATCTCAGCAGACCCGGTCTGGCGGGCGGCGTACGTGGACAGGATGGT
GCGGATGGTCCAGACGCACAAGAACCACGCCTGCGTCGTCGTCTGGTCTC
TCGGGAACGAGTCCGGGGACGGGCAGAACCTGCAGGCGGGGCGGGAGGCG
ATCAAGGCCTTGGACCCCACGCGGCCGGTGCAGTACGAAGGGGGCGGTGC
GGACATGTGTGGCACCGGCCGGACCTCGCTCACGGACATCCAGTGTCCCA
TGTACGCCGTGCCCGCCGCCGCCATCCAGATGGCTCAAAGCACGCGAGAC
GCGCGCCCGGTGATCTTGTGTGAGTATTCGCATGCCATGGGGAACAGCAA
CGGGAACCTTTTCAAGTACTGGGACGCGGTCTGGGCCCTCCCTCGATTCC
AAGGGGGCTTCATCTGGGACTATGTCGACCAGGGCTTGCGGCACACGGAC
CGCCTCACCGGGCGCAGCTATTGGGCCTACGGCGGGGACTTTGGGGACGT
GGACGGCCCCTGTTCAGGACACGGACAATTCTGCATCAACGGCATTGTCT
TTCCCGACAGAGCGCCGCATCCCGCCTTGCACGAGGCGAAGCACCTGCAG
AGCCCCGTCAAGTTCCACGTCCAGGGTCCCTCCTCGACGCGCCGCACGCC
CATGGCCCTGACCCTTGGCATCGAGAACCGGTACTCCTTCCGGAGCCTCG
CCCACCTGACCTTCCACTGGGCGCTGAAATCGGACGCGGGCGTGTTGGCC
GCTGGGACTCTGAACGTGGAAGGGAAGGAGGTGGGGCCGGGGCAGAGGGT
GGAGGTGACGCAGGATGTTGGACAGAATGGGCGGCCTGGAAGTCCCTCGG
AGCCACCCCGCAAGCTCATGTCTGTCCTGGCTGCATCCTCACCCTTCAAG
CGGTCCAACGGAGAGAAGAAAGACAAGCGCACTGGTGGCAACGACAGTAC
CACGGGTGGGACGGAGGGAGGCATTCCCTCTGCAATTTCAGGGCTGGGCG
GCACGTCTGTCTGGAGCACAGCGTGGGTAGAGGTGACGGCCCTGCTGAAG
GCGGACACTCCCTGGGCCCTCAAAGGCCACGTGGTGGCGAGGGAGACCTT
TCTCCAGGCCCTGGTTGGGGTCAGCGAGGGGGCGAGCGGCGACAGAGTGC
CCGTGCCGCTGCTGACCATGCCTGCCCTGGAATTGAGGCAGGAGAGGACG
GAGGAGGGCCAGGGACCCTGGACAGCGCATGCCGCAGCAGGAGAAGAGGC
AGTGCTTGTGGTGTCGGGCGCCGAGGCCAGCAAGGGGGAGGACTGGCGGG
TAGTGTTCGGAAAGAGGTCGGGTCGCCTCCTCGAGTACCGGGTGGGGGGC
GTGGACCTGCTGGTCCCGCAGACAGGGGGGCCCGAGCACGCCTTCCTCCG
TGCTGCCACCGACAACGATCGGGCGGGTTACCCCGTCAGTGCCACGTTCG
TGACCCCCAAGTGGCTCTGTGACGCTCTTGAGCCCTACTCCCCTTGGAAC
GTGCTGAGCTATTACGCGCGATGGCGGCGACTGGGCCTCTGCCTCGACGG
GCTCGAAACCAGCGTGCAGGAGGTGACGCCGGTTGTCCACACGACAAAGC
GCGTGGAGATCCTCGTCCGCGCCACCGTCTCCACGGCCCAGGCCGGCCCC
CTCCTGGATGTACAGACCCGCTACACAGTGTATGGGAGCATGGACGTGAA
GATGGGGATCAAGGTCGTCTCCCTGTACGAAAACCAAGCCAAGGCGCCTC
TGCACTTACCCCGGGTAGGCGTTGCCCTGCAGCTTCCCCGGGAGTTCACG
GACGTGTCCTGGCTGGGACTAGGCCCGCATGAGACCTACAGCGACCGCAA
ACGCAGCGGGCTCCTGGATGTACACCACGCCCATGTCCGAGACCTGCACA
CGCCCTATGTGGTTCCCTCTGAAAATGGGGGGAGGGCCGACGTGCGGTGG
GCGGCTCTGCGAGATCCTGAGAGCAAGATGGGACTGCTTCTGAGGTGCAC
AAATGGTCCGGTCCATGAGGTCGAGGACGAAGGGATGCCAGAGAAGAGAA
AGAAGAGCGTACATGCGCCGGGCACTTTCCAGTTCAATGCAAGTATGCAC
TCGGTGCGGGAATTGGAGCAAGCGACGCGCACATGCGAGCTGCCGACTTG
GGAGGAGGTGCAGCGGTTGTACGTGCACGTCGACCACAGGCACATGGGCG
TGGGCGGGGACAACACCTGGGAACCGGACTTGATACACTCCGAGTTCTTG
GTGCCCTGTGTCGGGACGTGGGAGTATGACGTATATCTGAGCCCCCTGGT
CCCGGACGAGGAGCCCTCTGCGAAGGCCTGCCGTGTCTTGGAGTGAGGTA
CAACGAGGTGGAGTTTGCAAGCGGGGTACTAAGTCAAAGATCTATCACGC
CACTTGGAAGCGGCAGTCTCTGACGTGTGTGCATATGTCTGTTTTGCATT
CGGACATGAGCTTGAGTCCTTTGCGAATGGGAGGGCTTCCGACTCAATTC
TCATCGGCTGTCAAGGCCTGTTGGCTGTGGGGCGTCATGGACGACATGTT
TAGTGATTTCTATCTAGGAAGGAGTTAGTGCGTCTCAGCATAATGAAGAA
TTCAAAAAATGATAAGAAATTTGATGTCCACTATTGCGAATTCATGATGA
ACTTTTCCC back to topprotein sequence of rna4921 >rna4921-protein ID=rna4921-protein|Name=rna4921|organism=Nannochloropsis gaditana|type=polypeptide|length=190bp
MTSRPNCWHRCLMMRKIIPFFFPVALFMVFSFLGPVQADNLPSKPVLAPL
DNAAPETENVATPTASAQSGARSSDPPEHIASSGPISSAIPRSPRESIDI
GDPIVQESAMLAMTDVNPVVGEAIGWQIVRADTQKFTSGTYYLLQVELRT
KTRCEAHEVTVFQDARSQILEKQGSGDIVPCNASLSLREP back to topmRNA from alignment at CM002464.1:676048..677224- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4921 ID=rna4921|Name=rna4921|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp|location=Sequence derived from alignment at CM002464.1:676048..677224- (Nannochloropsis gaditana)
CGAACCCAATATAGGCTTGACAGTATCACTTTTGTCCTTGGTTACAGGAG
GGTTTTGGTAGAGCAAATGGTACATCGCGCGTCAGCGGATGCGTTCCTTT
TGGACCAAAGCAATATCATGGTTCGTCGCCTCATTCTTATTCTTCATTCC
ATGCCGCTTTCCATGATAGCTTGAGGCGGCAGGGGCGGGGATTACATTTC
GACGTGATACAGCTGGTGACACTTCGCGGGAGCATGACTTCACGGCCGAA
TTGCTGGCATCGATGCCTTATGATGAGAAAAATAATTCCATTCTTTTTTC
CTGTGGCACTTTTCATGGTTTTTTCATTCCTGGGACCAGTCCAAGCTGAC
AATCTCCCCTCTAAACCTGTGCTTGCACCACTCGATAACGCTGCTCCTGA
GACAGAAAATGTCGCTACACCCACAGCAAGTGCACAATCAGGAGCTCGCT
CCAGTGATCCTCCTGAGCATATTGCTTCGAGCGGACCGATCTCTAGTGCC
ATCCCTAGAAGTCCCCGGGAGTCCATCGACATTGGAGACCCGATTGTTCA
GGAATCTGCCATGCTTGCCATGACGGACGTAAATCCGGTCGTGGGTGAGG
CGATCGGCTGGCAAATTGTACGTGCTGATACACAGAAATTCACTTCTGGA
ACGTACTATTTGTTGCAGGTAGAGCTTCGTACCAAAACACGTTGCGAGGC
GCACGAGGTCACCGTCTTCCAGGATGCCCGGTCTCAAATATTGGAGAAGC
AGGGGTCTGGGGACATTGTGCCCTGCAATGCCTCCCTGTCCCTGCGTGAG
CCTTGACACTGGAAGCCTTTAAATTGAGGGATGGGAGAAGACGTTTGAGA
GAGGATGACAGAAATGCCTTTCAGTGCAAATCGAGCGCTTATGTCTGCAA
TACCATTGGAGGGACTAGGCCCAGCTCTCGTGTTTCTATACGAACGGAAT
GCTATGTAAGCGTCGGAACAAATTAATATATGAATGTATATAAGTATATA
TATATATTTGTAAAGGGATTGGTATGTCGCTGCACCTCAGGTAACATGAA
GCATTTAAATTAAGCTTAAGGGAAAAGTTCATCATGAATTCGCAATAGTG
GACATCAAATTTCTTATCATTTTTTGAATTCTTCATTATGCTGAGACGCA
CTAACTCCTTCCTAGATAGAAATCACT back to topCoding sequence (CDS) from alignment at CM002464.1:676048..677224- >rna4921 ID=rna4921|Name=rna4921|organism=Nannochloropsis gaditana|type=CDS|length=573bp|location=Sequence derived from alignment at CM002464.1:676048..677224- (Nannochloropsis gaditana)
ATGACTTCACGGCCGAATTGCTGGCATCGATGCCTTATGATGAGAAAAAT
AATTCCATTCTTTTTTCCTGTGGCACTTTTCATGGTTTTTTCATTCCTGG
GACCAGTCCAAGCTGACAATCTCCCCTCTAAACCTGTGCTTGCACCACTC
GATAACGCTGCTCCTGAGACAGAAAATGTCGCTACACCCACAGCAAGTGC
ACAATCAGGAGCTCGCTCCAGTGATCCTCCTGAGCATATTGCTTCGAGCG
GACCGATCTCTAGTGCCATCCCTAGAAGTCCCCGGGAGTCCATCGACATT
GGAGACCCGATTGTTCAGGAATCTGCCATGCTTGCCATGACGGACGTAAA
TCCGGTCGTGGGTGAGGCGATCGGCTGGCAAATTGTACGTGCTGATACAC
AGAAATTCACTTCTGGAACGTACTATTTGTTGCAGGTAGAGCTTCGTACC
AAAACACGTTGCGAGGCGCACGAGGTCACCGTCTTCCAGGATGCCCGGTC
TCAAATATTGGAGAAGCAGGGGTCTGGGGACATTGTGCCCTGCAATGCCT
CCCTGTCCCTGCGTGAGCCTTGA back to top
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