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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100176g5.1046.mrna |
| Orig protein id | gnl|cribi|Naga_100176g5.1046 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:637838..641312 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4908 ID=rna4908|Name=rna4908|organism=Nannochloropsis gaditana|type=mRNA|length=2977bp
CGAAAACCGCGGGAATACTTTTTAATGCTCGCCCTCTTTTCCCTCTATCC
GACTCAAGGCAACAGCCTCAAGGAGGCGCGATTGAGCAAGGCTAAAGAGG
CGCCTATGCACCATGACTGCGGGGACTGAGACCCCAAAGTGCTCGGCTCA
GCCTCCCGTCACGTCATGGCCAACGCGTTCCCCCATACCTGTGTCCTCCT
CTTCATCAAGTGCACGATCTCAAATCTTAGAATCATCAGCGACATTCAAT
CAAGATGACCTGGATGTTCTGTTGCTTGACGCAAATTATCAAGGCAAAGG
GAAGTTCGACAAATTCAAATTTCTCCCTAGTACTTCAGGCACACCGAGCG
AGGCACATCTCCCGTTTGCAAGCTCCCAAAGCAACGGCACGGCCTCAATA
ACCACAGCGGGGGGCTCTGGCCTCATGGACTACCAAACAGTAGAACATGA
GAGCTTTTTGATGGTGGCAGCACATCGGAAAAGTCGCCGACTCGTGTATT
TATGTGGATTTGTGGCCTCCCTGACGTCCATTTTGCTCGGATACGATGTT
GGCGTTATGTCTGTGGCACGTAAGTACGTGGACATGCAGTTATCTCTGAC
GAGCGTGCAAAGCGAGGTGATTATGGGGTCCTTGAACTTGGTTGCTGCCC
TCGGGGGCCTCATCGCTGGCAAGACAGCAGACCGCTTCGGACGAAACAGG
GCCATCGCCCTAGCCTGCCTCATTTTCCTCACGGGGAGCGCCTGCATGAC
ACTGGCATGGAACTTCCGGGTCCTCCTCGTCGGGCGTATCATTACGGGCC
TGGGAGTGGGCTGTGGCTTCGTAATCGCCCCCGTGTACATCGCGGAGATC
ACGCCCCCCGAGATCCGTGGCCTTATGGTGTCCCTCACGGACGTGTGCAT
CAACGTCGGCATCGTGCTCGGCTCCGTGGTGGGCTTCTTCTGCGAGCTGA
CCATCGCCGACGATGACGCCAAGTGGCGAGTGATGCTTGGCCTGGGGACC
ATCCCGCCCGTCATCATCCTCTCGTTTTTGCGGTGCCTGCCGGAGTCCCC
GCGCTGGCTCCTCCTGCAGGACCGCGTCCCCGAAGCCCGCCACGTGCTCA
AGAGGATCGTCGGGCACGAGCAGGAGGCGGAGCGCGAGCTCATAGCCATC
GAGGAGGCGATCCAGATGGAGCGGGACGTGACGACGGACTGGTCAGAAGT
TCTCTGCCCCCGCCATCGCGCCATCCTCCTCCCCGTCCTCATGGGCCTGG
CGCTGGGGTTCTTCCAGCAGTCTTCCGGCTCGGAAGCGGCCGTGTATTAC
TCCCCACAAATTCTGGCCGAGGCGGGCATGTCGAGCACGGCTCACCAATC
GCTCGGCAACATCGCCATTTGTCTTTGCAAGTTCGCGGGGGAAATCGTGG
CCATGCTCTCCATGGACCGTGTGGGCCGCAAGCCCCTCTTCGTCTCCAGC
GCCCTCGGCTCCGGTTTCTTCCTGGTCCTGGCGGGGGCCTCCTTCCAGTA
CAGCCTCCCTCCCTCCCTTCTAATGACGTCCTTGTGTCTCTTCATGGCTT
TCTTCTCGGTGGGCATGGGCGCAATCACCTTCGTCGTCGCCTCGGAGATC
TTCCCGTTGCCTGTCCGCGGCAAGGCCATGGCGCTCGCAGTCTTTGTCAA
CCGCCTCCTGAGCGGAATGGTCGCCCTTACTTTCTTGAGCCTAGTGGATG
CGGTGACATACGCCAATACCTTCTACCTCTTTGCTGTCATTTCGTTCATC
TCGACCATCTTCTACGCCGGCTTCCTGCCAGAGACGATGGGAAAGACACT
GGAGGAGATCTCAATACTTTTTGAGAAGGAAAGTGCAGAGCACGAGGCTC
ACATACGGCACGAAGAGGAAGCAATGCAACGACGTCTGGCGGCGTCGGAT
GAACTGCGCCGGGCTCCCACCCCCATTTCTCCTCTGAGGGCTTTCCGGGG
CGAGGGCGCCGCTTCTGCGTCCATAGCGGGTCAGTATCAGAGTACGGAGC
ACGGGAAGATAAATGAAGCACATGCTTAAGCTGGTTAGCCGTGTGCCAGG
AAAGAATAACGGATGTGGCGGGGTGCCAAGTCAAGGGAACTGACACGCAA
TGTCGCGTCTGGCACGGAGAGTGCGCGGGGCGTTATCGCCAAAGACTTTG
TGAATAGTTTAGCCAGAACATGGCAGTTCTAGACGTTTTGATGGCATGCC
AATGCCGCGAAATGAGTGGTTGTGGGTTGGTCGAAATTTTTGTGATCTCT
GGGGAATGTTCACGCCCGATGACGATGGGAGACATTGATGAGTTGAGCTA
GAGCGGACTTGGTGTTGAGTGGAAGATTTTTTATCGAGGGATAGTCATCT
TACCTGGCCGGGATTTCAAAGGAGACACGAGGGAAAATGTATATTTTTTT
TATGAAAGGCGCGTGTTGTGCCTCCCCCTTCCGATTGAGATGAGAAGGGA
TGTAAACATGGCGGCGACGAATAAAGCACATAGAATACATAAAAAAGCCT
TCACGGTCATAACATGACCTTGAGCTGTACGGTCCAGACACAAGAATCGA
GTGAGGAGGCTAGGTTGCGGCCCGGGTCGCGAAGGCAACGATGGCTGTCT
ACGGGCATGTTCCGTCCTCCAACGAGATACCATCAAGATAGCCAAATAGA
TGGCCGCAGTCAAGACACAGAAGAAGGCGAATGAAGTAGATAAACAAATT
TTCGGAGAGGAAATAAGCAATTCACAAGAAGGAACTTTTTAAGACGAAGA
CTTGCCTTGATACCACAGTTCCCTTTCCGTTCAAGTTGAGAATGTGTTGT
ACTAACGAGCTTCACAACCTATAGCAGTCAGAAAACCCACAAGGATGTAG
CTGTCCCTGCATGACATCGTGTATGCTTATGAACCGATTTCACTGTTCGA
ACGTACGCCGTATCATATAAAGGAAAATGTTCGCAGAAGAACTCAATAAC
AACGCGAAACAAACAAAATCAACCACC back to topprotein sequence of rna4908 >rna4908-protein ID=rna4908-protein|Name=rna4908|organism=Nannochloropsis gaditana|type=polypeptide|length=908bp
MSALSEVSSTSRPPMLVIDSQGLRTDRLLHVELQTQDGGSKSSELSVRVT
KGRFSVDRRRFIERGDEFSMDNASIKGKFNVLAFNQVVNYVTGCGVVCFV
LHIEGRDGPCELYCLDRESAAGEKAGGQGRPSQRLTCTTLSGGMPLPPND
LSMEIVAGPRIFVWKDVQTTSKGARVSSWLEGKWTEYSLYGEERQGCGSI
TFQGIYPPVEGSYLFRTELLSSSSTYLWSVILPAPSESASVPPDKPGLLL
AAPPYPWLPKAALSDCACLCEPAGDWHSEGTEDATTASLYIVSTHELSFH
ASSHLPPERPLCRACLDTSTGPATQVCALLTRACDAEGRLDESAIEQVVV
LMARDPRMRLLLFVRRHSGPGAQKQELQPLREFCGVGGILRGDFLGSGWE
QLALLPGRSQGGPASAPRRPWRMAEAALTDLVHVWVHKASLKLQDAPDKL
FEDKEGLRSAGKKRGVAAGCPANEEGGELVAPIGREMERDKPARNGANAQ
RRGCEGSIEQEERVLCKFREAVRERLASEERRERRLQKTTAGSQLLLREG
QAVLTDMAYKDVLPHVVVPPHAEESEGLSFAASLEPLGARGQEEASNDWR
DSRASPLLPVATHRIMHQYLDADAHRISLDLSLRLAEPARVRLQHVALAV
FSRDGPLTFTSSTISDSLTHEKGGANKDELRLAVSFLVSAASLLNPTSWE
GSVTLCCAWRTLTWRGESEDEEPLAYPPGAQALQRLTVSASDLLASSFRA
KHDSDGGQNLLTSLPLLWKLDALVLSPLLAPKDSVSLSSRLAAVHLDAVR
NTCHVAAVDLPTLCITLRSLVEQNQEDRLNISSCPLKLVPADLSGRNRKS
CFLKGLMLFLKLLQQEFDLICTLVEGGQPEESSIRDVWLAQPALDVTVHV
LSKLCLLD back to topmRNA from alignment at CM002464.1:637838..641312- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4908 ID=rna4908|Name=rna4908|organism=Nannochloropsis gaditana|type=mRNA|length=3475bp|location=Sequence derived from alignment at CM002464.1:637838..641312- (Nannochloropsis gaditana)
TTTTGCCCCCTATCTTGCTGCCAGGAGCCAACAAGCAAGCCGTGGCTCTT
TCTTGTGAAATATGTTATCAAAAAGAGGTTAAAACGCAAGTAAAAGTATT
TGAGGGTTGTAACCCTTCACCTGGGAGGAGGACGGCACGGGCGGCTCTCC
TTGCATGTTGCACGCCATTCCAGGGAGTTGCAAACATTCACGCCGAGCAC
AAGCCTCCAAGCATCTACCCCAGCGGTACGACCTCGTCAAAACTCCGAAA
TGTAAGCTCCATATCCTTGCCTAGTGTCGAATTTCGCTCTCTTTTGCCTG
CATCTTGGGTCCAGGCTGATTCCATGATCGCGCTCGCACTGTCTCCGCCC
GTCAGGATCGCCAGCCTCCAGGACTGTCTCGTACTCGTGTTTTTATCCTA
CACCCGCCGCGCTATATTCTCACCCAGTTTACACTCAAACAGGGATGGTA
ATATGATAAGGCTTATTGCGTCGCCACTGGGACCCCGGACAAGGGATGTC
TGCACTATCCGAGGTATCGTCTACCTCCCGGCCACCAATGTTGGTAATCG
ACTCTCAGGGGCTGCGCACAGACCGCCTTCTGCATGTAGAGCTGCAAACC
CAGGATGGAGGAAGCAAATCAAGTGAACTCTCCGTAAGAGTCACCAAAGG
GCGTTTCAGTGTCGACAGACGGCGCTTCATAGAACGCGGGGATGAATTTT
CAATGGATAATGCCTCGATAAAGGGAAAGTTCAATGTGCTGGCGTTCAAC
CAGGTGGTGAACTACGTTACTGGGTGCGGTGTCGTATGTTTTGTTTTACA
TATCGAGGGAAGGGATGGCCCTTGTGAACTATACTGTCTGGACAGGGAGA
GTGCCGCAGGAGAAAAGGCCGGCGGCCAGGGTCGGCCCTCGCAACGTTTG
ACCTGCACGACCCTGTCGGGAGGTATGCCGCTGCCACCAAACGACCTGAG
CATGGAAATCGTTGCAGGGCCTCGCATTTTTGTCTGGAAGGACGTGCAGA
CAACGTCCAAAGGAGCTCGCGTGAGTAGCTGGCTTGAGGGCAAGTGGACC
GAGTACTCCTTGTACGGGGAAGAGCGACAGGGCTGCGGGAGCATTACCTT
TCAGGGCATTTATCCGCCCGTAGAAGGCTCGTACTTGTTCCGGACCGAGC
TTCTCTCCTCGTCTTCAACTTATTTGTGGAGCGTTATCCTGCCGGCGCCC
TCGGAGTCGGCGTCCGTGCCCCCCGACAAGCCCGGCCTCCTCCTGGCCGC
TCCACCCTACCCGTGGCTCCCAAAAGCCGCTCTGTCAGATTGTGCGTGCT
TGTGCGAGCCTGCAGGTGACTGGCACTCGGAGGGCACCGAAGACGCAACG
ACTGCCTCCCTCTACATTGTGTCCACCCACGAGCTGTCTTTTCACGCGTC
CTCCCACCTCCCCCCCGAGAGACCCTTGTGCCGGGCGTGTCTGGATACCA
GCACCGGTCCAGCCACGCAGGTATGTGCTCTGCTCACCCGTGCGTGCGAC
GCGGAGGGGAGGCTGGACGAGTCCGCGATAGAGCAAGTGGTCGTCCTCAT
GGCGCGAGACCCCCGGATGCGGCTTCTCCTCTTTGTCCGCCGGCACAGCG
GCCCGGGCGCGCAAAAGCAAGAGCTGCAGCCTCTCCGGGAATTTTGTGGT
GTCGGGGGGATTTTACGGGGGGACTTCCTTGGCAGCGGGTGGGAGCAGTT
GGCGCTGCTGCCTGGGAGGTCCCAAGGGGGGCCGGCCTCTGCCCCACGCA
GGCCGTGGCGCATGGCGGAGGCCGCTCTGACGGATCTGGTACACGTCTGG
GTCCACAAGGCGAGCTTGAAGCTTCAAGATGCACCAGACAAGCTTTTTGA
AGACAAGGAGGGGCTTCGGTCCGCCGGCAAGAAGAGAGGAGTGGCAGCAG
GATGCCCTGCGAACGAGGAAGGAGGCGAGTTGGTGGCGCCGATCGGGCGG
GAGATGGAGCGCGATAAGCCCGCAAGAAATGGCGCAAATGCCCAGAGAAG
GGGGTGTGAAGGGTCCATAGAACAGGAAGAGCGAGTTCTGTGCAAGTTTC
GAGAGGCCGTGCGCGAGCGCCTTGCCAGCGAAGAGCGGAGGGAACGCCGC
CTGCAGAAGACAACTGCCGGCAGCCAACTCCTGCTCAGGGAGGGTCAAGC
AGTGTTGACCGACATGGCCTATAAAGACGTGCTTCCCCACGTGGTTGTGC
CTCCGCACGCTGAGGAAAGTGAGGGTCTGTCCTTTGCTGCAAGCTTAGAG
CCGCTGGGTGCCAGGGGGCAGGAAGAAGCAAGCAACGACTGGCGAGATTC
CCGAGCATCGCCCCTGCTGCCTGTCGCCACCCACCGGATCATGCATCAGT
ACTTGGACGCCGACGCCCACCGCATCTCTCTGGACTTGTCGCTCCGCCTC
GCGGAACCAGCTCGCGTCCGCCTCCAGCATGTCGCCCTGGCCGTCTTCTC
CCGAGACGGACCCCTGACCTTCACGTCCTCCACGATCTCAGACAGCCTCA
CTCACGAGAAAGGAGGGGCCAATAAGGATGAACTCCGGCTTGCGGTGTCT
TTTCTCGTGTCGGCGGCCTCTCTTCTCAACCCCACGTCCTGGGAGGGATC
AGTCACCCTGTGTTGTGCCTGGCGAACCCTGACGTGGAGAGGCGAATCGG
AAGATGAGGAGCCTCTCGCTTACCCACCTGGCGCACAAGCGTTACAGCGT
TTGACTGTTTCTGCTTCCGATTTACTTGCCTCATCGTTTCGTGCCAAGCA
TGACAGCGATGGCGGGCAGAACCTTCTGACCTCCCTGCCCTTGCTTTGGA
AACTTGACGCTCTCGTCCTCTCTCCTCTGCTCGCTCCAAAGGACTCTGTC
TCCCTTTCTTCCCGACTGGCCGCAGTCCATCTTGACGCTGTTCGAAATAC
CTGTCACGTAGCAGCTGTGGATCTTCCTACGCTTTGCATTACTCTGCGCA
GTCTTGTAGAGCAAAACCAGGAAGATCGCCTCAACATATCCTCCTGTCCT
TTGAAGTTAGTGCCTGCGGATCTCAGTGGAAGGAACAGAAAGTCGTGTTT
TTTGAAAGGGTTGATGCTTTTTTTGAAATTATTGCAGCAGGAATTCGACT
TGATCTGTACACTTGTGGAGGGAGGACAACCCGAGGAGTCGAGTATCCGA
GACGTCTGGTTGGCGCAGCCTGCCTTGGACGTAACTGTGCACGTCTTGTC
CAAATTGTGCCTATTAGACTGACTGACACCATAGCAACATCGTAACAAAG
GCACTTAGCATCTCTGGCTCTAGCCTGCGGCATGCTAGGCAGGCTGGGGA
ATACCCCGTGACGTCACGGATCCGTTTCGCATACAGCTTGCCGCGCCCAC
GCCGGGCCCTACGCATTCCTTTCCTTGCTTCATCTTCCCTCCTGGGCCGC
ATAAGTGGAGAAACGAGGCAGTCGCTGTCGTGTTATGCTTACGCACACGA
CTCCACAGACGTCGCGCCTTGTCCT back to topCoding sequence (CDS) from alignment at CM002464.1:637838..641312- >rna4908 ID=rna4908|Name=rna4908|organism=Nannochloropsis gaditana|type=CDS|length=2727bp|location=Sequence derived from alignment at CM002464.1:637838..641312- (Nannochloropsis gaditana)
ATGTCTGCACTATCCGAGGTATCGTCTACCTCCCGGCCACCAATGTTGGT
AATCGACTCTCAGGGGCTGCGCACAGACCGCCTTCTGCATGTAGAGCTGC
AAACCCAGGATGGAGGAAGCAAATCAAGTGAACTCTCCGTAAGAGTCACC
AAAGGGCGTTTCAGTGTCGACAGACGGCGCTTCATAGAACGCGGGGATGA
ATTTTCAATGGATAATGCCTCGATAAAGGGAAAGTTCAATGTGCTGGCGT
TCAACCAGGTGGTGAACTACGTTACTGGGTGCGGTGTCGTATGTTTTGTT
TTACATATCGAGGGAAGGGATGGCCCTTGTGAACTATACTGTCTGGACAG
GGAGAGTGCCGCAGGAGAAAAGGCCGGCGGCCAGGGTCGGCCCTCGCAAC
GTTTGACCTGCACGACCCTGTCGGGAGGTATGCCGCTGCCACCAAACGAC
CTGAGCATGGAAATCGTTGCAGGGCCTCGCATTTTTGTCTGGAAGGACGT
GCAGACAACGTCCAAAGGAGCTCGCGTGAGTAGCTGGCTTGAGGGCAAGT
GGACCGAGTACTCCTTGTACGGGGAAGAGCGACAGGGCTGCGGGAGCATT
ACCTTTCAGGGCATTTATCCGCCCGTAGAAGGCTCGTACTTGTTCCGGAC
CGAGCTTCTCTCCTCGTCTTCAACTTATTTGTGGAGCGTTATCCTGCCGG
CGCCCTCGGAGTCGGCGTCCGTGCCCCCCGACAAGCCCGGCCTCCTCCTG
GCCGCTCCACCCTACCCGTGGCTCCCAAAAGCCGCTCTGTCAGATTGTGC
GTGCTTGTGCGAGCCTGCAGGTGACTGGCACTCGGAGGGCACCGAAGACG
CAACGACTGCCTCCCTCTACATTGTGTCCACCCACGAGCTGTCTTTTCAC
GCGTCCTCCCACCTCCCCCCCGAGAGACCCTTGTGCCGGGCGTGTCTGGA
TACCAGCACCGGTCCAGCCACGCAGGTATGTGCTCTGCTCACCCGTGCGT
GCGACGCGGAGGGGAGGCTGGACGAGTCCGCGATAGAGCAAGTGGTCGTC
CTCATGGCGCGAGACCCCCGGATGCGGCTTCTCCTCTTTGTCCGCCGGCA
CAGCGGCCCGGGCGCGCAAAAGCAAGAGCTGCAGCCTCTCCGGGAATTTT
GTGGTGTCGGGGGGATTTTACGGGGGGACTTCCTTGGCAGCGGGTGGGAG
CAGTTGGCGCTGCTGCCTGGGAGGTCCCAAGGGGGGCCGGCCTCTGCCCC
ACGCAGGCCGTGGCGCATGGCGGAGGCCGCTCTGACGGATCTGGTACACG
TCTGGGTCCACAAGGCGAGCTTGAAGCTTCAAGATGCACCAGACAAGCTT
TTTGAAGACAAGGAGGGGCTTCGGTCCGCCGGCAAGAAGAGAGGAGTGGC
AGCAGGATGCCCTGCGAACGAGGAAGGAGGCGAGTTGGTGGCGCCGATCG
GGCGGGAGATGGAGCGCGATAAGCCCGCAAGAAATGGCGCAAATGCCCAG
AGAAGGGGGTGTGAAGGGTCCATAGAACAGGAAGAGCGAGTTCTGTGCAA
GTTTCGAGAGGCCGTGCGCGAGCGCCTTGCCAGCGAAGAGCGGAGGGAAC
GCCGCCTGCAGAAGACAACTGCCGGCAGCCAACTCCTGCTCAGGGAGGGT
CAAGCAGTGTTGACCGACATGGCCTATAAAGACGTGCTTCCCCACGTGGT
TGTGCCTCCGCACGCTGAGGAAAGTGAGGGTCTGTCCTTTGCTGCAAGCT
TAGAGCCGCTGGGTGCCAGGGGGCAGGAAGAAGCAAGCAACGACTGGCGA
GATTCCCGAGCATCGCCCCTGCTGCCTGTCGCCACCCACCGGATCATGCA
TCAGTACTTGGACGCCGACGCCCACCGCATCTCTCTGGACTTGTCGCTCC
GCCTCGCGGAACCAGCTCGCGTCCGCCTCCAGCATGTCGCCCTGGCCGTC
TTCTCCCGAGACGGACCCCTGACCTTCACGTCCTCCACGATCTCAGACAG
CCTCACTCACGAGAAAGGAGGGGCCAATAAGGATGAACTCCGGCTTGCGG
TGTCTTTTCTCGTGTCGGCGGCCTCTCTTCTCAACCCCACGTCCTGGGAG
GGATCAGTCACCCTGTGTTGTGCCTGGCGAACCCTGACGTGGAGAGGCGA
ATCGGAAGATGAGGAGCCTCTCGCTTACCCACCTGGCGCACAAGCGTTAC
AGCGTTTGACTGTTTCTGCTTCCGATTTACTTGCCTCATCGTTTCGTGCC
AAGCATGACAGCGATGGCGGGCAGAACCTTCTGACCTCCCTGCCCTTGCT
TTGGAAACTTGACGCTCTCGTCCTCTCTCCTCTGCTCGCTCCAAAGGACT
CTGTCTCCCTTTCTTCCCGACTGGCCGCAGTCCATCTTGACGCTGTTCGA
AATACCTGTCACGTAGCAGCTGTGGATCTTCCTACGCTTTGCATTACTCT
GCGCAGTCTTGTAGAGCAAAACCAGGAAGATCGCCTCAACATATCCTCCT
GTCCTTTGAAGTTAGTGCCTGCGGATCTCAGTGGAAGGAACAGAAAGTCG
TGTTTTTTGAAAGGGTTGATGCTTTTTTTGAAATTATTGCAGCAGGAATT
CGACTTGATCTGTACACTTGTGGAGGGAGGACAACCCGAGGAGTCGAGTA
TCCGAGACGTCTGGTTGGCGCAGCCTGCCTTGGACGTAACTGTGCACGTC
TTGTCCAAATTGTGCCTATTAGACTGA back to top
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