|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g74.8792.mrna |
| Orig protein id | gnl|cribi|Naga_100021g74.8792 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:616500..618620 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4895 ID=rna4895|Name=rna4895|organism=Nannochloropsis gaditana|type=mRNA|length=1452bp
CGTGCAATTTAAGTCTTTCTGAGCAAGCTCGTTGGAGGATTGGAAGCTGC
GATCGTCCAACCTTGCCCTTGTCTTCCCTTTCACCGTCACCTCAACCACC
CCATCCACACAATTGACGTGACATGAACTGTTTCCTGGCTTCGCTTGCGA
AGAGATCCTGACTCTGTGTTTGCTTCCGTTTAATGTCCGTCATGATCGAC
TCTTTTTTTGCACCCAGGCATTGCTAATTTCACTTGTTTCCTTCCACCCC
TGCCAAAGTATCTAAGCACCAGACTTCTACTGTCCTAGTTGCGTTTCAGC
CTTTGCACGCCAAAATGTCGACTATGAAGTTTAAAGGGTGCAACAACTTT
CGGCAACGCCTCGTTTGTGCTACGTTGAGCGGGAGGCCCTTGCTTATCAC
GCACATCCGGTCGGAGGAGGAGGAACCGGGGCTGCGGGACTTCGAAGGAG
GCTTCTTGCGCCTGCTGGAGCGCTTGACCAACGGATGTCAGGTGGAGATC
AACGAAACCGGCACGGTGCTGCGCTATGTTCCCGGCATCATTGTAGGTGG
ACGGCACGAGCATGATTGCGGAAGTGCGCGGTCCATCAGCTGGTTCTTGG
AGGGCATCTTGCCCCTGGCGGTGTTTGCGAAGCAGCCCCTGCATCTCTCG
TTGAGCGGTCTCACCAATGACAGCTTCGATGTATCGGTAGACAATGTTAA
AGCTGTCATTTTGCCTATATTGGCCTTTTTTGGGGCGGAAGGCGCGACCC
TCAATGTGAAGAAACGGGGCCTGCCCCCGAGTGGGGGGGGGCACGTAGAA
TTTTCGTGCCCCATTGTGCGAGAGCTTCGACCATGCAATCTCGTTGACGC
CGGCTTGATCAAGCGTGTCCGAGGCGTGGCGTATTGCGCAAAGATCTCAC
CGCAGTTCGCCAACCGTGTGGTGACGTCGGCCCGCGGCCTCCTGAACCGC
CTGCTCCCGGATGTGTACGTGCACACGGACCATTACAAGGGCCTGGCCGG
CGGCCACAGCCCCGGCTTCGGGCTGACACTGGTTGCAGAGAGCACCACCG
GCTGTTTGCTAGCTGTGGATGTGCATGCCAAGGAGGGGGCTCTACCGGAG
GATGTGGGTGAGCGGGGGAGCGCGCTGCTGCTTGAAGAGGTGCGACGGGG
CGGATGCGTGGATTCCGTGGGGCAGGCGCTGGTCTTGCTTTTGATGGCGC
TGGGGCCGGAGGATGTCTCGAAAGTGAGGATCGGCCAGCTCACCATGCAC
GGTATACAAACGCTGCGGCTGGCGCGCGAGGCCTTTGGAGTCACCTTCAA
GATCCGGGCGGACACTGAGACGGGGACAGTGCTGCTCTCCTGCTTGGGGA
GTGGCGTGAGAAACTTCAGCAAGAAGGTCACGTAATGCCAATTTCTTCGT
TTGGTGATGTACAAAGCACCCAAGTAAAGTAGCAAATACTCAACTTCCTA
TA back to topprotein sequence of rna4895 >rna4895-protein ID=rna4895-protein|Name=rna4895|organism=Nannochloropsis gaditana|type=polypeptide|length=530bp
MLSQWLTDPRMAASTTESILPFVRTGRSQPVTDVSRSDARVGGDNAPGGG
LDLDSSSIVEAHRHATQAEELRREGRLLEAVQEHCEASHCFLEAAERLPC
TRSLTVAALVLLSDGHARQARTLQHFLRRRERTSSIPTAFGKSASRPPPA
PSSKNLATEGSLCSSAMVSSTASMGGTGTVADTGAVDDMLALERALQAIG
SQPLFSSGLYQPTGAGGHQGVPGGRYLSSTLGDSFFLVNNRQAAAREGAS
LAWEGGSSALGSSRHSRGAGRGAAASLRKPSSVAVAAPPRTSAGTEESPF
SRQGASTALPAASNLSRSRKSSSSTATASSTPLSSSVGSGTVGGGGGFLE
GVEAVQQGEVVRLLACMKTLGDENALLIKRAEDGERARQENERIRRETLE
FQELYAKRFKGLRAALEEFREKYPHESNPANHVASLRETARVKSLEAEVE
SLTVRLNREKEAGRKKDAMLARYQAWYTKLRQSVGQKKSAAAGNGMAHQQ
QLLGHQQKLGVRGSSACSGGNSNIRPPQGR back to topmRNA from alignment at CM002464.1:616500..618620- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4895 ID=rna4895|Name=rna4895|organism=Nannochloropsis gaditana|type=mRNA|length=2121bp|location=Sequence derived from alignment at CM002464.1:616500..618620- (Nannochloropsis gaditana)
GCGATGTTGACGCGGGTAGATTGATTTGAATCTCCATTCTGGGTCACAAT
GTTAGTGCGGGGAGTGTTGCGCATGTTCGTCTGTAACTCACGCGAGATGG
CTCAAGGCATGAGAATCCGCACCCCACCAGGCTAACAGCGTGCTTCATTC
CACAATATTGCCTACACAAGCGATGGGATGCTGTCTCAATGGTTGACCGA
TCCGAGAATGGCGGCGTCCACAACGGAAAGCATACTACCTTTCGTCAGGA
CCGGAAGGAGTCAGCCTGTCACGGATGTCAGTCGAAGCGACGCCCGTGTT
GGGGGCGACAATGCTCCTGGCGGGGGCCTGGACCTGGATTCTAGCAGCAT
AGTGGAGGCTCATCGCCATGCTACCCAAGCAGAGGAGCTGCGACGCGAAG
GACGGTTGCTTGAGGCGGTGCAGGAGCATTGTGAGGCCTCTCACTGCTTC
CTGGAGGCGGCCGAGCGACTGCCCTGTACTCGGAGCTTGGTACGTACGCA
CGCTAGTCCATTGTCAAAATGCCAGAGATTTTAAGCCGATGCTTTCGCTT
GGAGGAGAGAAAGAGGATTTTAATAGTTGGACTGTCTTATCCATCATAAC
CTGGTCGCGATTTCTAGGTCCAACTTCGCTGGGCCGGGGTCCAGTGTACT
GTTACGCGCTCATTGCACCACCTCCCGCATTGTTCATGGCTCACAGACAG
TGGCCGCCCTCGTGCTCCTCTCGGACGGGCATGCCCGGCAGGCGAGAACC
CTGCAGCATTTTTTGAGAAGGCGGGAGCGGACTTCTTCCATCCCAACCGC
GTTCGGTAAAAGTGCCTCCCGTCCCCCGCCCGCTCCATCCAGCAAGAACT
TGGCCACAGAAGGATCCTTGTGCTCCTCCGCCATGGTCAGCAGCACCGCA
AGCATGGGCGGCACGGGCACCGTCGCAGACACGGGGGCTGTGGACGACAT
GCTGGCCCTCGAGCGCGCCCTCCAAGCCATCGGGTCTCAGCCCCTCTTCT
CCAGCGGGCTTTACCAGCCCACTGGCGCTGGCGGTCATCAGGGTGTGCCC
GGAGGACGCTACCTGTCCTCGACTCTGGGCGACTCCTTCTTCCTCGTCAA
TAACCGGCAGGCCGCGGCACGCGAGGGGGCTTCTCTGGCCTGGGAGGGCG
GGAGCAGCGCCTTGGGCTCCTCCCGACACTCGCGGGGGGCTGGACGGGGT
GCAGCTGCCAGTCTGCGCAAACCCTCCTCGGTTGCCGTCGCCGCACCCCC
GCGGACGTCGGCTGGGACGGAAGAATCGCCATTCTCGCGCCAGGGTGCCT
CGACAGCCTTGCCGGCGGCTTCGAACCTGTCCCGCTCAAGGAAGAGCTCT
TCGTCCACTGCGACCGCTTCCAGTACGCCACTTTCAAGTAGCGTCGGCAG
CGGTACCGTCGGGGGCGGCGGCGGTTTCTTGGAAGGGGTGGAGGCCGTGC
AGCAAGGAGAGGTGGTGCGTCTGCTGGCGTGCATGAAGACGCTAGGCGAC
GAGAACGCCCTGCTCATCAAGAGGGCCGAGGACGGGGAGCGGGCCCGGCA
GGAGAACGAGCGGATCCGTCGGGAAACTCTGGAGTTTCAGGAGCTGTACG
CGAAGCGCTTCAAGGGCTTGCGGGCGGCGCTGGAGGAGTTTCGAGAGAAG
TACCCGCACGAGAGCAACCCCGCCAACCACGTGGCCTCTCTGCGGGAGAC
CGCCCGCGTCAAGAGCCTCGAGGCCGAGGTGGAGAGTCTGACCGTGCGCC
TGAACCGGGAGAAAGAGGCGGGCAGGAAGAAGGATGCTATGCTCGCCAGG
TACCAAGCCTGGTACACTAAGCTTAGGCAGAGTGTGGGGCAAAAGAAAAG
TGCAGCGGCTGGAAATGGGATGGCGCACCAACAACAGCTTCTCGGGCACC
AGCAAAAGCTCGGCGTGAGAGGAAGCAGTGCTTGCAGCGGAGGCAACAGC
AATATTCGTCCCCCTCAAGGACGTTGAGCGAGACGGAGAAGGAGAGTGTT
TATTTAATTGGAAAGCAATTGTACAGTCTGATTTTTTTATAGGAAGTTGA
GTATTTGCTACTTTACTTGGGTGCTTTGTACATCACCAAACGAAGAAATT
GGCATTACGTGACCTTCTTGC back to topCoding sequence (CDS) from alignment at CM002464.1:616500..618620- >rna4895 ID=rna4895|Name=rna4895|organism=Nannochloropsis gaditana|type=CDS|length=3186bp|location=Sequence derived from alignment at CM002464.1:616500..618620- (Nannochloropsis gaditana)
ACAGTGGCCGCCCTCGTGCTCCTCTCGGACGGGCATGCCCGGCAGGCGAG
AACCCTGCAGCATTTTTTGAGAAGGCGGGAGCGGACTTCTTCCATCCCAA
CCGCGTTCGGTAAAAGTGCCTCCCGTCCCCCGCCCGCTCCATCCAGCAAG
AACTTGGCCACAGAAGGATCCTTGTGCTCCTCCGCCATGGTCAGCAGCAC
CGCAAGCATGGGCGGCACGGGCACCGTCGCAGACACGGGGGCTGTGGACG
ACATGCTGGCCCTCGAGCGCGCCCTCCAAGCCATCGGGTCTCAGCCCCTC
TTCTCCAGCGGGCTTTACCAGCCCACTGGCGCTGGCGGTCATCAGGGTGT
GCCCGGAGGACGCTACCTGTCCTCGACTCTGGGCGACTCCTTCTTCCTCG
TCAATAACCGGCAGGCCGCGGCACGCGAGGGGGCTTCTCTGGCCTGGGAG
GGCGGGAGCAGCGCCTTGGGCTCCTCCCGACACTCGCGGGGGGCTGGACG
GGGTGCAGCTGCCAGTCTGCGCAAACCCTCCTCGGTTGCCGTCGCCGCAC
CCCCGCGGACGTCGGCTGGGACGGAAGAATCGCCATTCTCGCGCCAGGGT
GCCTCGACAGCCTTGCCGGCGGCTTCGAACCTGTCCCGCTCAAGGAAGAG
CTCTTCGTCCACTGCGACCGCTTCCAGTACGCCACTTTCAAGTAGCGTCG
GCAGCGGTACCGTCGGGGGCGGCGGCGGTTTCTTGGAAGGGGTGGAGGCC
GTGCAGCAAGGAGAGGTGGTGCGTCTGCTGGCGTGCATGAAGACGCTAGG
CGACGAGAACGCCCTGCTCATCAAGAGGGCCGAGGACGGGGAGCGGGCCC
GGCAGGAGAACGAGCGGATCCGTCGGGAAACTCTGGAGTTTCAGGAGCTG
TACGCGAAGCGCTTCAAGGGCTTGCGGGCGGCGCTGGAGGAGTTTCGAGA
GAAGTACCCGCACGAGAGCAACCCCGCCAACCACGTGGCCTCTCTGCGGG
AGACCGCCCGCGTCAAGAGCCTCGAGGCCGAGGTGGAGAGTCTGACCGTG
CGCCTGAACCGGGAGAAAGAGGCGGGCAGGAAGAAGGATGCTATGCTCGC
CAGGTACCAAGCCTGGTACACTAAGCTTAGGCAGAGTGTGGGGCAAAAGA
AAAGTGCAGCGGCTGGAAATGGGATGGCGCACCAACAACAGCTTCTCGGG
CACCAGCAAAAGCTCGGCGTGAGAGGAAGCAGTGCTTGCAGCGGAGGCAA
CAGCAATATTCGTCCCCCTCAAGGACGTTGAATGCTGTCTCAATGGTTGA
CCGATCCGAGAATGGCGGCGTCCACAACGGAAAGCATACTACCTTTCGTC
AGGACCGGAAGGAGTCAGCCTGTCACGGATGTCAGTCGAAGCGACGCCCG
TGTTGGGGGCGACAATGCTCCTGGCGGGGGCCTGGACCTGGATTCTAGCA
GCATAGTGGAGGCTCATCGCCATGCTACCCAAGCAGAGGAGCTGCGACGC
GAAGGACGGTTGCTTGAGGCGGTGCAGGAGCATTGTGAGGCCTCTCACTG
CTTCCTGGAGGCGGCCGAGCGACTGCCCTGTACTCGGAGCTTGACAGTGG
CCGCCCTCGTGCTCCTCTCGGACGGGCATGCCCGGCAGGCGAGAACCCTG
CAGCATTTTTTGAGAAGGCGGGAGCGGACTTCTTCCATCCCAACCGCGTT
CGGTAAAAGTGCCTCCCGTCCCCCGCCCGCTCCATCCAGCAAGAACTTGG
CCACAGAAGGATCCTTGTGCTCCTCCGCCATGGTCAGCAGCACCGCAAGC
ATGGGCGGCACGGGCACCGTCGCAGACACGGGGGCTGTGGACGACATGCT
GGCCCTCGAGCGCGCCCTCCAAGCCATCGGGTCTCAGCCCCTCTTCTCCA
GCGGGCTTTACCAGCCCACTGGCGCTGGCGGTCATCAGGGTGTGCCCGGA
GGACGCTACCTGTCCTCGACTCTGGGCGACTCCTTCTTCCTCGTCAATAA
CCGGCAGGCCGCGGCACGCGAGGGGGCTTCTCTGGCCTGGGAGGGCGGGA
GCAGCGCCTTGGGCTCCTCCCGACACTCGCGGGGGGCTGGACGGGGTGCA
GCTGCCAGTCTGCGCAAACCCTCCTCGGTTGCCGTCGCCGCACCCCCGCG
GACGTCGGCTGGGACGGAAGAATCGCCATTCTCGCGCCAGGGTGCCTCGA
CAGCCTTGCCGGCGGCTTCGAACCTGTCCCGCTCAAGGAAGAGCTCTTCG
TCCACTGCGACCGCTTCCAGTACGCCACTTTCAAGTAGCGTCGGCAGCGG
TACCGTCGGGGGCGGCGGCGGTTTCTTGGAAGGGGTGGAGGCCGTGCAGC
AAGGAGAGGTGGTGCGTCTGCTGGCGTGCATGAAGACGCTAGGCGACGAG
AACGCCCTGCTCATCAAGAGGGCCGAGGACGGGGAGCGGGCCCGGCAGGA
GAACGAGCGGATCCGTCGGGAAACTCTGGAGTTTCAGGAGCTGTACGCGA
AGCGCTTCAAGGGCTTGCGGGCGGCGCTGGAGGAGTTTCGAGAGAAGTAC
CCGCACGAGAGCAACCCCGCCAACCACGTGGCCTCTCTGCGGGAGACCGC
CCGCGTCAAGAGCCTCGAGGCCGAGGTGGAGAGTCTGACCGTGCGCCTGA
ACCGGGAGAAAGAGGCGGGCAGGAAGAAGGATGCTATGCTCGCCAGGTAC
CAAGCCTGGTACACTAAGCTTAGGCAGAGTGTGGGGCAAAAGAAAAGTGC
AGCGGCTGGAAATGGGATGGCGCACCAACAACAGCTTCTCGGGCACCAGC
AAAAGCTCGGCGTGAGAGGAAGCAGTGCTTGCAGCGGAGGCAACAGCAAT
ATTCGTCCCCCTCAAGGACGTTGAATGCTGTCTCAATGGTTGACCGATCC
GAGAATGGCGGCGTCCACAACGGAAAGCATACTACCTTTCGTCAGGACCG
GAAGGAGTCAGCCTGTCACGGATGTCAGTCGAAGCGACGCCCGTGTTGGG
GGCGACAATGCTCCTGGCGGGGGCCTGGACCTGGATTCTAGCAGCATAGT
GGAGGCTCATCGCCATGCTACCCAAGCAGAGGAGCTGCGACGCGAAGGAC
GGTTGCTTGAGGCGGTGCAGGAGCATTGTGAGGCCTCTCACTGCTTCCTG
GAGGCGGCCGAGCGACTGCCCTGTACTCGGAGCTTG back to top
|