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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g69.8791.mrna |
| Orig protein id | gnl|cribi|Naga_100021g69.8791 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:609041..610402 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4891 ID=rna4891|Name=rna4891|organism=Nannochloropsis gaditana|type=mRNA|length=1349bp
GCCATAGATACCCTCACCAAAGTAGGACGCTGTGACCTGCCTGTCTTGCC
GAGTTAAGTTTACAGAATGGAGGCCTTTATTCTTTGCGATGGCATCCAAT
GTCATCTTTATGACTTTTTGGCACCGTATATAACCAAGCCACGATAGATT
GTAGCTCTCACGCCTCGTCTGGATTTCTCTAACCCTGCGACCTGGTACAA
TCATTCACCTAGTATTTTCATCTTCTCCTCGTGCCATCCTACCCAGGCAA
ATCATGAAGACTACAGTTGTGGCACTTCTTGCCACAGGTTTGTCGGCTGC
GACGGCATTCGTCCTGCCAACTGGGCCCCAACCTGCTGTGAAGCTGAACC
GGCAGCAAGGCCTCGTGTCGATGGGCCTGAATGCTGAGCTTACCAAAACC
TACCCACGTGATTTTAAAAATATTCCGGTCGGTACTAGCTATGGGAAAGG
CGAGGATTCCACGCTCAACAAGGAAATTGAGCAGCAAACGCTTGAGTTTC
TGGAGGGGCAGCTCTCATCGGTGCTCAAGAAAGCAGTAGAAATCAAGAAA
AAGCCGCTTTTTACGACCGCACTGATCGCAGGCGACTGCGTGCTCCTGGA
CGGTATTGCTAAGGCCGGCCTCCTGGACAAAATTGAGATTGTTTTCATTG
ATACATTTTTTCTGTTCCCTGAGACTTTAGACTTTCTGCGTGAGGTGGAG
GAACACTATGGCTTCAAGGCAAAAGTGTACCATTGTGCGGACTGCCCCAC
TCAGGAGTCATTCTACGACAAGTATGGAGCCGACTATTGGATGGAAGACA
TTGACCAGTACGATTTTAAGTGCAAAGTGGAGCCCCTCCAGCGTGCGCTG
AAGGAGTCTGGCACGGACGCTTGGATCAACGGCCGTCGACGGGACCATGG
TGCGGAGCGTGCGTCCCTGCCCGTGTGGGAGGGCGACAAAGTGAATCCCA
TCGCATTCTGGACTTTCGAGGACTGCTGGAATTACCTTCGTAAACATAAT
GTACCGTACCACCCCCTTCACGACGTTGGATTTTCATCCCTTGGTGACAT
GCAGAGCACGGCGAAGGTGCCCCTGGAGAAATGGATGACTTACGCCGGTG
AGCGCAGTGGCCGCTTCCAGGGCCTGACGAACAAGGACGGCTCGGCTAAG
ACCGAGTGCGGCATCCACACGAAATAACACTTTGGCTGGGCCGTATTGTC
GCGACTGAATCTTGCGCCGCCACTCTGTAAGCGTGATGACCCCCGCGACC
GACAGGAAAGATAGAAAAACTTGGTGCGACGATACAATCATGCTGAAAGG
TTTAAGAACCACTAAGATTCTTCACCAACATTCTCTTTCGGTGCACTGG back to topprotein sequence of rna4891 >rna4891-protein ID=rna4891-protein|Name=rna4891|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MQAMPTLRRTCFLIVMISSLGSKSMGFLRRPLPFHSQKVYVERFHSLIPG
QDLRNTRLMRTILNDEVRDIGTGRQLFSAKEENKAFPSHLSSSSGRSPTS
DRRLRLPKEYERPKAQKPVSFAHVAARPREMGELEVVAATFMLFLARILD
PFVNPAPVQNYSLLICDIALLISFRTVEDMVLTPFPSINAAASSDVLKNG
LIAYADPISAVSHIFFVISDGLTLGCFWLAAILLGRAQAVEHDVGSSYAL
STWATVRTWLSLVNIRLGVLFLHVSLEVSFTALDHQDALSWTLIPSTHAG
MHAVSCSTNPYLKSSFIGFFFPIFYHRHYGSKRESTSSISSQR back to topmRNA from alignment at CM002464.1:609041..610402- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4891 ID=rna4891|Name=rna4891|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at CM002464.1:609041..610402- (Nannochloropsis gaditana)
TTTTTTGCCTATAACTTTCGGACGACTCACCGCTTAAAATGCAAGCGATG
CCAACGTTACGTCGGACTTGTTTCCTGATTGTAATGATCTCAAGCCTCGG
CTCTAAATCCATGGGTTTTTTGCGCCGCCCGCTACCATTTCACAGCCAAA
AAGTTTACGTGGAGCGCTTTCACTCCCTTATTCCTGGGCAGGATCTTCGC
AACACCCGCTTGATGCGCACCATTTTAAACGACGAAGTACGGGATATAGG
TACAGGCCGACAGCTCTTCAGTGCGAAAGAAGAAAACAAAGCGTTTCCTT
CTCACTTGTCCAGCAGCAGCGGAAGAAGCCCTACTAGTGACCGACGCCTT
CGCCTGCCGAAAGAGTACGAACGCCCGAAGGCACAAAAGCCCGTTTCTTT
TGCACATGTAGCCGCGCGTCCACGAGAGATGGGAGAGCTTGAGGTTGTAG
CAGCGACCTTCATGCTTTTCCTAGCACGGATCCTTGATCCTTTCGTCAAT
CCCGCACCTGTACAGAACTACTCATTGTTGATCTGCGACATTGCCTTGCT
CATCTCCTTCAGGACGGTAGAAGATATGGTGCTGACTCCATTTCCCAGCA
TCAATGCGGCGGCATCGTCCGACGTGTTGAAAAACGGCCTGATAGCTTAT
GCAGATCCAATATCAGCTGTCAGTCATATTTTCTTCGTCATTTCGGATGG
TTTGACCCTCGGGTGTTTTTGGCTTGCTGCCATTTTGCTAGGTCGCGCCC
AGGCCGTCGAACATGACGTAGGTAGCAGCTACGCCCTCTCCACGTGGGCC
ACTGTTCGCACTTGGTTGAGCCTGGTGAATATTCGTCTAGGGGTCTTGTT
TTTGCATGTAAGTCTTGAAGTGTCGTTCACTGCGTTGGACCACCAAGATG
CATTAAGCTGGACGCTGATCCCCTCGACTCACGCAGGCATGCACGCCGTC
TCTTGTTCGACAAATCCGTACCTCAAATCGTCATTCATTGGTTTTTTTTT
TCCAATTTTCTACCACAGGCATTATGGATCCAAGAGGGAGTCGACCTCCA
GCATTTCCAGTCAGAGATGAATGCTTTGCTCTTGACCATGCTGGGCTGGC
GCTGGTTTAGTGTTAGTATGAGTAAAGCGTTATTTTAGAGCAATCCTGCT
GTACATTTATGCCCTTGCTAAGAAAAAACATCAAATGTACGGAAAATTAG
ACTTTTCAGTTTTTTGACTCTTTCTGCTGTCACACCATCGAATTCGTCCT
CAGCAATCTTTCTGCTGGCAGTACAATGCTAAAATAACTCACACTCGAAA
GCATCGGGTTTGGGAGGGTTGACATTTTGAAAAAATAAGGAAGACGACAA
AGCGTATAAGCA back to topCoding sequence (CDS) from alignment at CM002464.1:609041..610402- >rna4891 ID=rna4891|Name=rna4891|organism=Nannochloropsis gaditana|type=CDS|length=1032bp|location=Sequence derived from alignment at CM002464.1:609041..610402- (Nannochloropsis gaditana)
ATGCAAGCGATGCCAACGTTACGTCGGACTTGTTTCCTGATTGTAATGAT
CTCAAGCCTCGGCTCTAAATCCATGGGTTTTTTGCGCCGCCCGCTACCAT
TTCACAGCCAAAAAGTTTACGTGGAGCGCTTTCACTCCCTTATTCCTGGG
CAGGATCTTCGCAACACCCGCTTGATGCGCACCATTTTAAACGACGAAGT
ACGGGATATAGGTACAGGCCGACAGCTCTTCAGTGCGAAAGAAGAAAACA
AAGCGTTTCCTTCTCACTTGTCCAGCAGCAGCGGAAGAAGCCCTACTAGT
GACCGACGCCTTCGCCTGCCGAAAGAGTACGAACGCCCGAAGGCACAAAA
GCCCGTTTCTTTTGCACATGTAGCCGCGCGTCCACGAGAGATGGGAGAGC
TTGAGGTTGTAGCAGCGACCTTCATGCTTTTCCTAGCACGGATCCTTGAT
CCTTTCGTCAATCCCGCACCTGTACAGAACTACTCATTGTTGATCTGCGA
CATTGCCTTGCTCATCTCCTTCAGGACGGTAGAAGATATGGTGCTGACTC
CATTTCCCAGCATCAATGCGGCGGCATCGTCCGACGTGTTGAAAAACGGC
CTGATAGCTTATGCAGATCCAATATCAGCTGTCAGTCATATTTTCTTCGT
CATTTCGGATGGTTTGACCCTCGGGTGTTTTTGGCTTGCTGCCATTTTGC
TAGGTCGCGCCCAGGCCGTCGAACATGACGTAGGTAGCAGCTACGCCCTC
TCCACGTGGGCCACTGTTCGCACTTGGTTGAGCCTGGTGAATATTCGTCT
AGGGGTCTTGTTTTTGCATGTAAGTCTTGAAGTGTCGTTCACTGCGTTGG
ACCACCAAGATGCATTAAGCTGGACGCTGATCCCCTCGACTCACGCAGGC
ATGCACGCCGTCTCTTGTTCGACAAATCCGTACCTCAAATCGTCATTCAT
TGGTTTTTTTTTTCCAATTTTCTACCACAGGCATTATGGATCCAAGAGGG
AGTCGACCTCCAGCATTTCCAGTCAGAGATGA back to top
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