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Properties
| Property Name | Value |
|---|
| Product | alpha-ketoglutarate-dependent taurine dioxygenase |
| Orig transcript id | gnl|cribi|Naga_100021g64.8768.mrna |
| Orig protein id | gnl|cribi|Naga_100021g64.8768 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:591506..594151 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4886 ID=rna4886|Name=rna4886|organism=Nannochloropsis gaditana|type=mRNA|length=4160bp
GACGCAGAATTTGATGTCAAGCACGTTGTGAAGTTCTTTGGCGACAGCTA
TTTGAAGACACACGAATGCCGCCACATGGAGAAACTGATGTTTACCACGC
GCATTACACAGGACTACAAGGACGCTTTGGTACTCTGCAATTGGCCATGA
TGCATCATCTACCGCGACTCTCTATGCGATGTAACTCTCTCGCTTGTAAA
GGGTTGTTTGCCCCATTCGCGCTTACGTTTCGCTCCCAAGGATCGTCGGC
CTTTCCACAGGCTGCGTCTACCCAAAGATGCTGGCCTCCCCCCCATTTAT
CGCATGAGGATGGCAAACGCAGCATTTTGGATGCCATGTCCGAACCCTCC
TATCCTCATTTGGCGGACCGACCTTACCTGCGACAACCCATTCCATTGAC
TTCTCCAAACGACCCCGCAAATCGCATTAAATATGAAGTGACACTGGAAA
TTGACGAAGACATCGTGGAAGGCTACTTGGCTTGGATCCAAGAAGGACAC
ATCCAAGAGGTCATGGCGCTGCCCGGCTTTGTGGGATGGAACATTTCGGC
TTCGGAGGATAGCATAGCTGCAAGTCGGGGGATACATGGTCAACGCCGTG
TGGTTTTTGTGGAGCAGTATGAGGTCGAGTCTCGAGAGTTTCTGGAGAAG
TATTTCGTCAAATATGCTCAGAGGATTCGCGACGATCATTCCCGGATGTG
GGAAGGCAAGTTTGCCGCCTCGCGGCGCATTCTCCACACGTTCGGCCGCC
AGACTGACAAGGAAGCTGAGCTTTGGAAGCAGCGCGATGCAAAAAACAGC
TTCCGTCTTAATAATTTGCGGTACCAGGTTGATCGAGTGCCTCGATTCAC
ATCCGAGGGTCTGAAGGTCCAAGCTCTACCGTCTTCGTTGTGGGAAACAC
TGAAGCAGTTTTACCGGGCGCGCCGGCACGAGTCCGTGGAGGACCGCCTC
GACCCGTCGGAGATTTCGATCAATACCTGGGTATCGCCCACTCTGCGCCT
CGATCTCCCTCCCGCTTTGGCATCCGAGGTCGTCGGCACGCTCAAACCCA
TTCTTGAGTCCTGGTGCGGTGTGGCGGAGCTAGAGTCGACGGGTATCAGT
GGCATTCGTACCTACCTTCCCGGCGCCACCATCCAAGAGCACGTGGACAT
GGCGACCACCAATGTCGTGTCCGCGCTTATCAACCTGGACCAGGATGTGA
AGGAGCCCTGGCCTTTTGAAATGAGGGATCATTCTGGCAAGCTCCACGCC
TTGCATATGCGGCCCGGGGAGGTGGTCATGTATGAATCTGCGACGTGCGC
ACACCGGCGTTCTCGCCCGCTGCCACCTGGAGGCTACTACACGAATCTGT
TTCTCCGTTTCAAGCCTAAGGGATGGACATTTACATACTAGTTAACATAG
TAGTTGGATACGCCATGGACTTGAGCCTGAAAGAAAACGATGAGACCAGG
GTAGGCTGGCGTGTGAGCAAGCGGGAGGCGGTATCGCTTGTGAGCAGCGG
AAGGCTACAGTGCTTCTATGGAGCAACTTGACAAGCTTGTAAATGTGTGT
GTGTGTCGATATTATTTCTAGCGTCGTAGTATAGCGCCATCACGTGACTG
ACGGCGAGACGAGGAGGCGTGCGTTCATTCCCGAGCTCACTTTGACATGA
ATGTGAAGCGACGGGGTGCTTTTGTGGTTTCTCTTTATCACAGCAGTGTA
AAATAAAGTGGACAGTCAGGACTTGTTCGGCCACAATACTTCGCCCAGGA
GAGCAGCATTGGCAAAAATAAGCGCCTCTTGATACCATTTCACTTCAGCT
TTCAGGGTCTCTGTCGGGCAGAATATAGGTTCTTTTTCTCATCTTAAATT
CACAAGGCACTGACGATTAGAAAACCAAACGCCTACTTGGTCGTCTCTGG
TCTCTTCCTCTCCTTGACATCCGTGTCCCCCACTACATTCCTCTCCTGGC
TCTCTCTCTTTCACCGCCCGACCCCGACCTCGCTTCTCCTCATTTCTGAC
ATGGACCGATACTTGGCCTTTTCCGGAAAGCGCAGCCATGACGTTGATTT
AGAAATTCCCCCGGAATCGTACGGACAATAGCCCCGGCTATATGTCGTAG
GCTCGAAGAGGCCAGAGAATTATCACTTCTGCTTCTTCTTGGGAGGCGCA
TCTTCCTCCTCCTCGTCTTCGTCGTCCTCTTCATCATCTTCGCCGTCGCC
ACCCTCCTCCTCGTCTTCCTCGTCATCCTCATCCCCGTCATTGTCTCCAC
CACCCCCCTCCTCGGCGCCCTCTTCATCGTCCTCGCCGTCCTCATCCTCG
TAGTCGTTCTCCGAGTCGTCCTGTCAGGAATGCACGTGTCAGAACGCGAT
ATTGAGTCGGCGTGGGTCTTTCGTCAGTGAAGCTTCTTCTTAACATTCCG
CATAATTATCGAATGGAAGAATGCTCACAAAATTAACAAAAAGCGGGGAG
CCCGTCTCGGGGGTACGGGTTGAATGTACCTTCCTCTCGCTTTTCGAGAC
CCGAAAACTGTACACTTTCTCTCTGCCCAAAGCGCCCCCCTTTACCGACC
CGAATCACCTTACCTCGTCGTCGTCATCATCTTCGTCGTCGTCGTTCTCG
TTGTCCTCATCCTCCTCCTCGCCCTCCACATAGTCCTCATCCTGTCGTTG
AAGATTGAAGTTATTTATTGCGGAGGGACTTCACATGCATGCTTTGCAGC
CTAAGCCGCGGAGTAGGGAGTAACACACTTCACGACCCCTATCCCATTGG
CTTTGACGGTGGAAATTTTGCGTGTTGTGCGGATCGCAACCTCACGGGAG
AGAACGCTCACTTACATCCTCGCTGTCCTCGTCATCGTCCTCCACGTCTA
CCACGTTTTTAGGGACCTCCTCTGAATTACTCTGCCAATGAAGTATGAAT
GGTGATAAAGTGACGTGAGCCACGAGTAGCGTCGCAATCCTTTGCGAGTT
TTGACTGGAGTTAACGTATATCACTAGGCCTCCGAATTCATTATGCAGGC
GGCGTCTCCCACACTCACCATGCTTAGCTTTAAATGCTGTAGATAAATTC
TAGTTGGGGCCGTGAAGCGTGCAAATAACCTGTACGCTGTAAAATGGGCG
GGTCTTTATCCATTACTGGGCAAGAGTGTCAAAGCCTGGGTGTGGGCGGG
GTGAATATAATCCATCGCCCCGCCCGATCGCCTCGCTTAAGGGGGCCGTG
CGGGCTCGACCTCGCCGCCCTTCGCTCGTGCACACAGTATTGACAAAAAC
TTCTCGTCGCTTTCCGTATGCAATTTCTCCACCACATCGCTGCAGGGAAC
CTCGTGTGAGCAGGCGGAAGGGGCTTTAAGCATGATTCGATTTCTATTGC
TTCAGAATCGTCAGGGTAAGACAAGGCTGTCAAAGTGGTATATCTTACCA
CCAAACGAGGCTGAAAAGTTTCGTTTGGAGGCGGACGTGCACAAGCTGAT
TGTGAGCCGGGATCGTAAATACACAAATTTTGTCGAATACCAGAATTACA
AACTCATTTATCGGCGCTACGCTGGACTTTATTTCTCTTTGGGTGTGGAT
GTGACGGACAATGAACTCGCATATCTGGAGTCTATCCACCTGTTTGTTGA
GCTCCTCGATGAGTACTTTCGCAATGTCTGCGAGCTCGACATTGTGTTCA
ATTTTAACAAGGTGTACTCCATCTTGGACGAATTCATTTTAGCGGGAGAG
ATTCAAGAGACGAGCAAGCGCGAGATTTTGGAGCGTATTCGGGATATGCA
AGGATATGAGAAAGCCTCCGAAAAGTAGGGAAAGTCTTTCGACCTCGGCG
AAACAAAACAAGTAAATCGTCATGGTGGAGAGATGAACAATTTTTGTACA
AAGAAATCAGGTCAAAGGACGTAATTTTTGATGCAGAAGTACAGCAGGGT
AATCAAAAAGAGAGTTTTGCTTCAGCTTAATTGGCTACATGTGCTCTGTA
CGCTAGGAATCATCGGAATTTTCATCGCCGTATCCGGCTCCGTCCGCCTC
GAGACCATCGGCGTCCGCCTCATCTCCAACCATGTCCTCCTCGTCTCCCT
CTTCCTCGCTGCTTCCATCCATGTACACCTCAACATCCCCATTATCGTCA
CCTGGTGCGAAGGTGTGATCGCCACTTCCGTGCTTGGAAATCTGAGCAAG
CATGAGTTCC back to topprotein sequence of rna4886 >rna4886-protein ID=rna4886-protein|Name=rna4886|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MCPLLGDHSRQKIMQLLVSHNRQISSWSLRTRHRSVTQAQGIRLELNSVP
LSSSPRPSTASLSAMPCSASWTEAKAFHLRPLTGALGAELTGIDLKALVA
NSRAIYEIKEAFHEYSVLVFRNQACLSAKDLLRIAEFFGEVEARPVVKAQ
YGLPMVHDLIREKGTLGHYGEVWHQDCSYMHHPPLGALLYGMEVPAYGND
TVFCDMSLALKTLSPAFVDLLKPLRAVHSAYKMVKKDPSVASLAYDEVEH
PVVRRHPDTGELSLFVNPFFTKHLAGMTEEESRPILEHLFEIMTRAELQC
RVRWERDTLVVWDNRCVAHQAIRDNTRERRVMRRVEIRGDMPV back to topmRNA from alignment at CM002464.1:591506..594151+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4886 ID=rna4886|Name=rna4886|organism=Nannochloropsis gaditana|type=mRNA|length=2646bp|location=Sequence derived from alignment at CM002464.1:591506..594151+ (Nannochloropsis gaditana)
TGCGTCTCGTCTCCCGACAATCGCGGCTGTACACCTTTTTTCACCATTCC
CACataccttttccttttttatcgTGGAACTCTTTTAGTCTTTCTCGCTT
CGTTGAAGGCTTAAAGCGGCCCGCTCTAATGTGTCCGCTTCTAGGAGATC
ATTCCCGGCAAAAAATAATGCAGCTCCTGGTGTCTCATAACCGGCAAATT
TCTTCCTGGTCACTGCGTACAAGGCACCGTTCCGTAACGCAAGCCCAAGG
AATTAGACTTGAATTGAATAGCGTGCCTTTGTCATCTTCCCCGAGGCCTT
CAACAGCTTCGCTATCTGCGATGCCATGCTCGGCCTCATGGACAGAAGCC
AAAGCCTTCCATTTACGGCCTCTGACTGGCGCTTTGGGGGCGGAATTGAC
CGGGATAGACTTGAAAGCGCTCGTTGCAAACAGTCGAGCAATCTATGAGA
TTAAAGAAGCTTTCCATGAGTATTcagtcctcgtcttccgGAATCAAGCA
TGTTTAAGCGCAAAGGACCTTCTCAGGATAGCGGAATTTTTTGGGGAAGT
TGAAGCTCGACCTGTGGTGAAAGCCCAGTACGGACTTCCCATGGTCCATG
ACCTGATTCGGGAGAAGGGAACGCTGGGACATTATGGGGAGGTATGGCAT
CAAGATTGCTCGTACATGCACCATCCCCCCTTAGGGGCGCTTTTGTACGG
CATGGAAGTTCCTGCCTACGGAAACGACACAGTCTTTTGTGACATGAGTC
TTGCATTGAAAACCCTGTCGCCCGCTTTCGTAGACTTACTGAAGCCGCTA
CGAGCAGTACACTCGGCTTACAAGATGGTTAAAAAAGACCCTTCGGTCGC
GTCGCTGGCTTACGACGAAGTGGAGCACCCCGTCGTCCGCCGGCACCCCG
ACACCGGGGAACTATCCTTGTTTGTGAACCCCTTCTTCACCAAGCACTTG
GCAGgaatgacggaggaggagagcaggccTATATTAGAACACCTCTTCGA
GATCATGACGCGAGCTGAGCTGCAGTGCCGGgtgaggtgggagagggaca
cATTGGTGGTGTGGGACAACAGATGCGTCGCCCATCAGGCGATTAGAGAC
AACACGCGGGAGCGACGAGTCATGCGGCGAGTAGAGATCCGAGGAGACAT
GCCTGTATAACAAAGGAGAAAAACCAGGAGAAGGTGACCCGCGCCATGCT
CTTATGATTAaagcgaggagaaagagcgacTCGTGGACATGATGTAGCGT
GGAAGACTTCCCCGTTGAGACTTTCTGCAATGTTCCTGCCTTACCATTCG
CAGAGCGGCCCGCACAGCAGTGTacagaaagggggagaggatggaccCAT
AGAAACATGTGTATTCTTTTGTAAACTTTTTTAGAGGCTGTTTCATTTTT
TGAGCCGTAGATTTTTACCCGACACATATAGGCAGACAGGCACAACCAAA
TGGCCTACTTCTCCGACTCTCTCTATTCCCACCTTCTATTAACACTTAAG
ATTTAACTCACACACGCGCATTACCGCATATTGGAATCCAAAGTACTCAC
TTGATTTCTCTCGAAACTGCCTCATTCCCAATCTTCAACCCAATGCGCGC
CGCTTCCGTCTCTTCGCGGCGGTCGAAGCTCCCGggttttcttctttctc
ttcttgtGAGTACGTTGTACGGGCGCTGCGCTTGCCCTTCCCTGTTTGCG
CGCTGATCGGATGTGCCACTTGTTCCATTTCATCCCCTTGAAAGGTCGGG
TCATTTTCTTGAGAAGCCCCTTTATTCTCGATGACGTCTTCTAAAAGCGC
ACGTCGCTTCAAGGCACGATCAGCCCGAGAAATTTTTTGAGCCTCTAttg
cctccctggcctcgcgCAAtttctgctcctcctcgagcgcAGCCTCATCC
CCCTCGTCCATCGCGGAGTCATGTTCGTCGTCCGATGTGTCATAATCGAA
GGCGCAAGGGCTTGGGTCTGCGACGCCatgtcctttccttttcgtTTGCT
TCCTCTTGGCTTCTTTGCCACTTTTTGTCACACTCACCCCTAGGCTTACT
GTTCTTTGGCGCACGAGAGGACGGCTCTCCATATCTTCATCATGATCCTG
CGCATCACTGTATCTCATTCTCTCATATTTACTACCTGACCCTTTCTTAT
TTCCGACAAGACTAGCGCCTTCTTgtcgctcttcctcgttcatTCTCTTG
AACCGGCGCGTCCTTGATTGTCTACAGTCGCCAGCAGCGATcaccatcct
ttcctcctttgtgGGCTTTGGACACTTTCTTGAAGAGTGCTGACCGAGAA
CAGATGTACCCGTGGTGGATATTTCTGTGGCAATTGGACTCAAACCCCAA
TCCGGTCCGTCTCTGTAGCCGTtcacctcctcatcttccccaTCATCGTC
TAACTTTCCCGCTTTTGACTTCGTACTTTCCGTCCTGTCCTCGCCGCTCT
GTTTCTCAGGTTGCACGGAGGTACGGGGTCTACCCGTTTGCGGGGCGTAG
AGCGGAAGTGGTAGATAGATTTTACCTGGATAGGCTTGAAGGTTCTCTTG
AGTTTTGATCTTAGAACGAAGAAATTCCCGACATACGCGTGTCACCTGGT
GCAGACGTTCAGTGGCAACATCATCTTCATTAATAAGGctattttt back to topCoding sequence (CDS) from alignment at CM002464.1:591506..594151+ >rna4886 ID=rna4886|Name=rna4886|organism=Nannochloropsis gaditana|type=CDS|length=1032bp|location=Sequence derived from alignment at CM002464.1:591506..594151+ (Nannochloropsis gaditana)
ATGTGTCCGCTTCTAGGAGATCATTCCCGGCAAAAAATAATGCAGCTCCT
GGTGTCTCATAACCGGCAAATTTCTTCCTGGTCACTGCGTACAAGGCACC
GTTCCGTAACGCAAGCCCAAGGAATTAGACTTGAATTGAATAGCGTGCCT
TTGTCATCTTCCCCGAGGCCTTCAACAGCTTCGCTATCTGCGATGCCATG
CTCGGCCTCATGGACAGAAGCCAAAGCCTTCCATTTACGGCCTCTGACTG
GCGCTTTGGGGGCGGAATTGACCGGGATAGACTTGAAAGCGCTCGTTGCA
AACAGTCGAGCAATCTATGAGATTAAAGAAGCTTTCCATGAGTATTcagt
cctcgtcttccgGAATCAAGCATGTTTAAGCGCAAAGGACCTTCTCAGGA
TAGCGGAATTTTTTGGGGAAGTTGAAGCTCGACCTGTGGTGAAAGCCCAG
TACGGACTTCCCATGGTCCATGACCTGATTCGGGAGAAGGGAACGCTGGG
ACATTATGGGGAGGTATGGCATCAAGATTGCTCGTACATGCACCATCCCC
CCTTAGGGGCGCTTTTGTACGGCATGGAAGTTCCTGCCTACGGAAACGAC
ACAGTCTTTTGTGACATGAGTCTTGCATTGAAAACCCTGTCGCCCGCTTT
CGTAGACTTACTGAAGCCGCTACGAGCAGTACACTCGGCTTACAAGATGG
TTAAAAAAGACCCTTCGGTCGCGTCGCTGGCTTACGACGAAGTGGAGCAC
CCCGTCGTCCGCCGGCACCCCGACACCGGGGAACTATCCTTGTTTGTGAA
CCCCTTCTTCACCAAGCACTTGGCAGgaatgacggaggaggagagcaggc
cTATATTAGAACACCTCTTCGAGATCATGACGCGAGCTGAGCTGCAGTGC
CGGgtgaggtgggagagggacacATTGGTGGTGTGGGACAACAGATGCGT
CGCCCATCAGGCGATTAGAGACAACACGCGGGAGCGACGAGTCATGCGGC
GAGTAGAGATCCGAGGAGACATGCCTGTATAA back to top
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