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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g50.8739.mrna |
| Orig protein id | gnl|cribi|Naga_100021g50.8739 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:559167..560726 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4874 ID=rna4874|Name=rna4874|organism=Nannochloropsis gaditana|type=mRNA|length=5312bp
ATGTTGCCTTTCGCGCTGTTCCCGCATGCGAGTTCCGATCGCGGAGACCG
AACCTCCCTTCTTAGCTATTCCCGTGCCTTACGCCCCAATCTCGACAACA
CACTCACCCCTTACCTCCCTACAAACCTTCACTTGTGTAGCAGAGTCTAC
AATATGGTAGCGGAGTTGCGCCGTAGCGGTCGGGTGTCGGTCAGACCCGA
CAGTGTCTACGAGGACGCGTTGAGAGAGGCGGCGGGAAAAAAGGCCAGGA
GGCCCTTGGCTTTGAGACTCCAAGAGCCTGTCGAAAGCTCACCCGGGGGA
CAAATTAGCCATGAATGGCAGGAAAGAAGTAAAGAACGTATGACCATCGG
GAAGAACGAAAAAGCGAACGGCTCTAGCAAGCGCAAGCGTTCTTCTCTCA
AGAGAGCAACAGAGACAGACGTCGAATCCTCTCGTGAAACTCTTGCCAAG
AAGGAACCCATAACCTACAGCACAGATGATGAGACATCTGATGAGGATGA
TCTCGATAAAATCATGGGTGAAAAAAATCGACGAAAGCACCGCCGTGATG
CAGGTATGCGTAAAGGAGCCGGTGGACGAGGACTTGCTAACTTGAGAGAG
GGCAAGTGCAGTCTTCTCTTTGAATGCCTGGCGCGGGAATTACCGATTGA
AAAACGCATGAAGGATTGGGTGGTAGCTTATGAAAAGGAGGAGGATGAAA
GAGGAGATGATGCCGATGGGATGATGAGCAGTTCTCTTGTGGACATGTTT
AACTTCTTGCTTTGGAGCTCGGGAGCCACCAAGACCTACGTGAAGAGGGA
TAGAGAGACACTTCCCATGCTCGATTCGGAAGAATGGGAAACAATGATAA
ATGGTATTGTGCAGGATATGCGAGCAGGCGGCGTTTTATCGTACCCTTTG
CTGGAGGGTGCCCGCTTCAAAGGGTTCAGAGGCCGCTTTGCTGAGGCGTG
GGAGCTGCTTGTCAAGGCTGTTCGGGAGGGAAATGCGCATAAGTTAGAGC
CAGTGCATGCAGTTATCGATTTGGTGCGGGCGTTGTGCGAAGTTCCTCTG
GTATCTATTCGACATACGGCTGCCTACGCTGGTCTGCGCTTGGGCAACGC
GCTCGTCCAACAGACCCTAGCCTTATCTAAGAAGGTGGAGGTGGCAAGCC
GACAGCTTGAAGCGGAGCAGCACAAGGGTGGGGCGCGCAGCCGCAAGGCT
TTGGATTTGAATAGCGCCATTATGGATCTCACTAGTCACCAAACCGCACT
GGAAGCGGTGCTGGAGGAGATCTTTAACGGGGTGTTCGCGTCGCGGTATC
GAGACGTGAGCGAGCGCGTGCGGGCGGATTGCATGGATGGTCTGGGCTTC
TTTTTGGACACCTACCCGTCCATGTTCCTACGGGACCAATTTGTCAAATA
TCTCGGTTGGATGCTCTACGACAAGGCGAGCACCGTGCGCGCAGCAGCCG
CAGGCGTTCTGCTCCGGCTGTACTCGAAGCCCGTTTATCTCAGCCAGCTG
GAGAACTTCACTGCTCGGTTTCTGAAGCGGTTGGAGGACCTGGTGCATGA
CGTGGACGAAGGTGTAAAGCGCACGGCCATCCAGGTGCTGCGTCTCCTGC
AGGGTGCGGGCTATCTCGATGAGGCCTCGCAGGAGCTCCTGGATGAGGTT
GACGAGTTGCTGCTCGACCCCGCGTGGGACGTGCGCACGCGAGAGCAGGC
CATGCTCTTTTTCACGGACCACGTGGATGGATTCAACGAGTTGACGGACG
GTGAGGATGAGGAAAGCAGGCAGGGCGAGAAAGAAATCGATGAGGGAGCC
AGCTCTGGTGGAAGTCCGGAGAAGGAGAAAAGTAAAGAAACTGTGCCGGT
AGTCAAAACGAAGCAGCAATTGAGGCGTGACAGCACAGGTAGACAAGGTG
GAGCCCGCCGCCGCGGTGTGATAAAGCGTCTCGTAACAGTGGTGCAATTT
TTAGACTACCACCTCGGTGAGAGGGAGCGTTGGGCCCCCGAGCATGAGGA
GCTCGTCGCAGCTTGCGTTGAAGCCTTTGAAAGGCACCCTGATGGCGATT
TTCTGTACGATTGGCCCACGTATTTCCATCTTCTTGGCGATGAAAGTGCT
GCTTCTTCCTCTCTTCGAGCTGGGAGCACCTCCACTGACATGAGACTTTC
AGATCACGAACAGTCTCTTCTCATTCGAGTGCTAGGCGCCAGTGTGAAAC
GTGCGACCTCTTTCGCAAGCCCCAAGCAAGGCAACAACTCCGCCGCTAGT
GAACGAGGTAGAAATTTTTCTGGCAGTGCGAAACCGGCGGATATGCGGGA
GGCACGGCACCGGGGACAAGTGCTGGAGGCGGCCGTCGAGGCTTTTACTT
CAGGCGCCGTGGAGGATTTACCCAAAGTTCTCAGCCGATTTCAAACGGAT
CCGGGAAAAATGGCGGGCTTGGTTGGATTACCTCAATACCTCCAAGCAAG
CGCCATAGCAAATAAGCGCAATAGAGGCCATTTTGAGGCGCTTCTCAAAC
TTTTGAGAGGCACGTATTTGAAGGCTACAGACGGAGCAGTGCTTCAAGAT
ATCGCTCGATCTCTCTCCCACTTACTTCAACGCGATGAAGAAGAGTGTGG
CCGCCTTCACAATGTTGGCGCCGTTCTTTACTCAATTGTCGCCGAGCTTT
TGCGACGTCTCGGCGCTGTTGAAACAGCCAGGGACGGCGCCGGAACCAAG
GAAAACAAAAGGCGCCGGAGAGCTGGTTGCGAGGACACGGACTTTTCAAC
TGGTCTGGTCCTCCTGCAGCTAGGAACGCTGGCAAAGCAAATAGACATCA
CTGATTACCTGGGTGAAAACGAAGACGGGAGACTCTTAGAGGTCACGTCA
TGTGTTCAAAAGGTGTTACTGGCCCGTCTTCGGGAAGTGCAGAACTGGAC
CGGGAGCACGGAGCACCTCCAGCTCGTTGTCCGCGTCGTCCGCGAAGGAT
TGTATCTATTGTATGTGGTCCTACTTCACTCTACGCGTGGGCTGATCTTT
TTGGCTCAAGCCAAGAGGCCCGCGAACAAAAAACTTGAAGCTATGGATAA
TTCTCATAAGCATGGTCCGAGTCATTTCGGAGAAATTGAGAAGAAGGGGG
AAAGTGACAAAGACGATGTAATGCTTGACCTAATTGAGAGTAGCGATTGT
GATAATATTGACAACGTCGGGGAGAAAGAGGCGAACGCTATACTTGCTCA
GCGCAATACATTGCTGGGGGCCTTGAGCGCCGTTTTGTCTCTGAATAGGC
CCAGCTGCAGCAATGAAAATGGAGAAGGAAGCGAGGACAAGGCTGAATTG
GAAGGGACAGACAACAACAAATCCCACAATGGCTGTCGCTCAGGAAATGC
CTTTTCGGCCCATACAGTGAGAACTCGGGAAAACGAGTCTTTTAGAGCGA
TAATTGATGCCATAGAAGCTCTGAAGAAGGCTGCTTATGTCCTTGTAAGT
GATCTACGCTTCTTGTTCCGACCACTTTGCTCTCGGTACCAGATCCTCTG
TCGCGTAGCATGGACACCAGAACCAGATTTTCTGCGCCTGCTGCAAACCT
TTTTCCAGACGGAGGAGGCACGCTACGAAGAGGCAGTGGCAACAGCAAAA
GCACAAGGATCTGAAGAAGATCTTCAGGCAGCGGACGAGATACTGCGTAG
AGACCTTCTAGATCCTCTCATTCGGTCAGTCCTTTACACCACTGAGAGCA
TCAATCGACGGCAGGCTGCTGCAATAGCGGCCCACTTCGTGGACTCTGGG
CGAGAATCTACCGAGAGTGTGCGCTTCTTGATGAAGCAACTCAAGGACTT
AGACGTGAAATTATATTTGGAGGTACAGATGACTACCCTCCGGTCTTGCT
TTCATAAATGGTTTCAAAAGCCTATTGAAGAGCGAGCACTGGGAGGAGGC
GAGGCCGACGAGGATTATGAGGTAGCAGATGCTGCTGCAGCGGCTGCGAT
GGAAAAAATACTGCGATTGGGCACGCGAATGGCCCAAACTCTAGGGGTTG
GGCGGGTGAAGGATGAGACTCCTGCCGCAGACTCATTTGTGCGCTTTATA
AAAAGTGGTATCGCATTCGCTCTGGACGAGGCACCCAAAAACTTTACCTT
TTTAGACGTCCTGCGATGTTACATGCCCAAGCTTCCCGAAAGCCGCACGC
GCGAGGTAGTTCAGCTCTTCCGTGAAAGAACGGCGAAATTGCCTGAGCCT
GTCAAACGGCAGGTGGAGCACGAACGACAGCTGATAGCTGCAGAGGAGGA
AGAGGTAGACCTCACTCAGGACGGAATCGCCTACCTGAACTTCTACCACG
AACTTTATGGTCATTTTGGTGGAGCGGGGGCCTTGGCCTCAGGGGCACCT
ATTCGGACCTCTCGCACACCCTCGAAAGACAAAGATGGGAATGATCACCC
GCACGCCCTGAGTACAAGTTCGAAGAAGCGATTAGGCCTTCCCACGAGCT
GTGTCGGCCAAACGAAGAATGGAACGAACCGAATGAACCATCCAATCTCA
TTTCCAGGTGACTTGAAGCGCAGAGCACGTGTGGAAGAAGGATGTTTAGC
AAGTGGTGCTGTCAGCATTGACGAGGAAGAATCTATTCGCTCATTTGAGG
ATGGTAAAGAGGTCGGTTTGTCATCATGCCATGAGGAAAGCGACGGGGAT
GGAAACAGGATGCTGCAATCAATAGAAGCCTGTTCACGCATGGGTGGGAG
AAGAACAACGTCGTTGGCCTCGCGGCGGCGCTCGAGCTCGTTGCTGCCTT
CAGTGCATGAGATGCAGGATGCGATCGACGAGGCAGACAGCAGTGAAGAG
GAGGAAGAAAAGGAAGGAATGGTATCATGGAGAGAATCTAAGGCGACACG
CGGTGGCGAACAGAGCCATCGACGACGCGGCACGAGAAAGCGGGGTCGCA
TTTCCTCCCAAGCAGAAGAGGAGGCTGCGATTGAGGGTCGTGGTGACAGT
AGAGGAATCGACAGCGACAGCGAGACATCGATCTTCGGGGAACTTACGCT
TTCAAAAGCTTGTGGGAAGGGAGCTGGAAAGACGGAAAAGAGAAAAATGG
ATGGAGGAGCTACAGGCCGAAAAATGTCGGAAAACTAGAGATTCGATTAT
GAAAATAGCTCAAAAGTACGCGAACGAATCACGAAAAATGTCTGGAGGTG
AGGTCTCATCTTTTTCAGACATGGACGAGTGAGAGTCTATGAATTCTAGT
CAGCTAATGAATGCAAATATACCTAGCAAATTGACCTTTCAAGATCCAAC
AGAAAAGAGTGAGATTGGTGCGGTGACAAAAAAATATAGCTGAAGAAGTT
TCTGCGTTCCAA back to topprotein sequence of rna4874 >rna4874-protein ID=rna4874-protein|Name=rna4874|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MFYFEQQKTMAERGKFSSASKLRALITTFALILHPSSLWEAGEAASVFGM
TSSNVGPGADTTSGNAFPRRMASTGRGMPTLGGVGFDKERTLGFVEYLST
EALESIDTFDRLSVGLNMTIENFFTFINRLLEEEVPENDNEAEDRDSEDS
VWGDEETLTVKQLGQLFGGVNDTAVEYILENLGADIYDLQAGFNTVDVIM
VLMFVSSHLEANQIPLSILEIISAFCDPEWEDLDADVWVRNVAKAKGVNE
KKVQHVMDQLEGSLEDIRSYVEEIVRMDTCELLLNARFPSIVSAASKSSN
PHSTLQRAPSAAYSSSFVMDKR back to topmRNA from alignment at CM002464.1:559167..560726+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4874 ID=rna4874|Name=rna4874|organism=Nannochloropsis gaditana|type=mRNA|length=1560bp|location=Sequence derived from alignment at CM002464.1:559167..560726+ (Nannochloropsis gaditana)
CCCGGACTGTAAGCAGTTTGCGGTGCAGCAAGGTCTGCGCGGCATGACAT
GCGCTTTCCACGCGATGAAAAGACTCGCGGACAAGCGTGCAGAGGAGGGC
CCGAGGCTTCATCCCGgtactctccctccttccgccctcgccccatGCAT
GACCCATATCCCTTGCCCCGCTCGCAGTCGTGTAGATGGCGATGGCCACC
CCGCAAGAAGACATCAGTGGAGGGTAATTGTACCCACGCCTTGGGATTGG
AAGATTGATCTCCCTTTGGGAGCTTGTGTGACGTCGGAGTTTGCCATATC
GACGATTTCATACGTGACATGGGCTCTGGAAATGAGAGGATCACATACAC
TGGTCGCAGTTTGCACGCGTAGCACATGCTCTGCCTCCGAACCTTCTTTG
GCTTGAGTATAACTGTCATTACTCATGTAAAGTGCCCGAAACTCCTTGCA
CAGCGTGCTTAATCTAGAATCGATTTGTTTCTAATGTTGTCTTGCCTATA
AATGTTTTACTTCGAACAACAGAAAACTATGGCTGAGCGGGGGAAATTTT
CCAGCGCCTCAAAATTGCGCGCGCTAATCACTACATTCGCACTTATACTG
CATCCTTCGTCACTGTgggaagcaggagaagcgGCCTCGGTATTTGGAAT
GACGAGTAGCAATGTAGGGCCCGGAGCAGATACAACAAGCGGCAATGCCT
TCCCCCGGCGCATGGCTAGCACTGGTCGTGGCATGCCTACGCTTGGAGGC
GTTGGCTTCGATAAAGAGCGCACACTTGGTTTTGTAGAATATTTGAGCac
agaggccttggagagTATTGATACCTTCGACCGGCTCTCGGTCGGTTTAA
ATATGACTATCGAGAACTTCTTCACCTTCATCAACAGATTGCTTGAAGAA
GAAGTTCCTGAAAATGACAATGAAGCTGAGGACAGAGATTCAGAAGACAG
CGTATGGGGTGATGAAGAGACGTTAACAGTAAAGCAGCTGGGGCAACTGT
TTGGCGGCGTGAATGACACGGCAGTAGAATATATCTTAGAGAATCTCGGT
GCCGATATTTATGACTTGCAGGCGGGTTTTAATACTGTAGATGTCATCAT
GGTGCTTATGTTTGTGTCCTCGCACCTGGAGGCCAACCAAATACCGCTTT
CAATCCTTGAGATAATTTCTGCCTTCTGTGACCCCGAGTGGGAGGACCTA
GATGCGGACGTTTGGGTGCGCAATGTGGCGAAGGCCAAAGGTGTCAATGA
GAAGAAGGTGCAGCATGTCATGGATCAGTTAGAAGGCTCTTTAGAGGACA
TAAGGAGCTATGTGGAAGAGATCGTGCGCATGGACACCTGCGAGCTCTTG
CTCAATGCTAGatttccctccatcgtctcaGCTGCCTCGAAGTCCAGCAA
CCCACATTCAACCCTTCAGAGAGCTCCGAGCGCTGCCTACTCGTCATCGT
TCGTGATGGACAAGCGTTGATGATGATTGAGAACGCGTGGCAAGTCTGTG
GAGAAGAAACTTACTCGTTCAGAGGAAATAGAGAAAAGATTGTACACATA
CCAGGATTTG back to topCoding sequence (CDS) from alignment at CM002464.1:559167..560726+ >rna4874 ID=rna4874|Name=rna4874|organism=Nannochloropsis gaditana|type=CDS|length=969bp|location=Sequence derived from alignment at CM002464.1:559167..560726+ (Nannochloropsis gaditana)
ATGTTTTACTTCGAACAACAGAAAACTATGGCTGAGCGGGGGAAATTTTC
CAGCGCCTCAAAATTGCGCGCGCTAATCACTACATTCGCACTTATACTGC
ATCCTTCGTCACTGTgggaagcaggagaagcgGCCTCGGTATTTGGAATG
ACGAGTAGCAATGTAGGGCCCGGAGCAGATACAACAAGCGGCAATGCCTT
CCCCCGGCGCATGGCTAGCACTGGTCGTGGCATGCCTACGCTTGGAGGCG
TTGGCTTCGATAAAGAGCGCACACTTGGTTTTGTAGAATATTTGAGCaca
gaggccttggagagTATTGATACCTTCGACCGGCTCTCGGTCGGTTTAAA
TATGACTATCGAGAACTTCTTCACCTTCATCAACAGATTGCTTGAAGAAG
AAGTTCCTGAAAATGACAATGAAGCTGAGGACAGAGATTCAGAAGACAGC
GTATGGGGTGATGAAGAGACGTTAACAGTAAAGCAGCTGGGGCAACTGTT
TGGCGGCGTGAATGACACGGCAGTAGAATATATCTTAGAGAATCTCGGTG
CCGATATTTATGACTTGCAGGCGGGTTTTAATACTGTAGATGTCATCATG
GTGCTTATGTTTGTGTCCTCGCACCTGGAGGCCAACCAAATACCGCTTTC
AATCCTTGAGATAATTTCTGCCTTCTGTGACCCCGAGTGGGAGGACCTAG
ATGCGGACGTTTGGGTGCGCAATGTGGCGAAGGCCAAAGGTGTCAATGAG
AAGAAGGTGCAGCATGTCATGGATCAGTTAGAAGGCTCTTTAGAGGACAT
AAGGAGCTATGTGGAAGAGATCGTGCGCATGGACACCTGCGAGCTCTTGC
TCAATGCTAGatttccctccatcgtctcaGCTGCCTCGAAGTCCAGCAAC
CCACATTCAACCCTTCAGAGAGCTCCGAGCGCTGCCTACTCGTCATCGTT
CGTGATGGACAAGCGTTGA back to top
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