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Properties
| Property Name | Value |
|---|
| Product | dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit |
| Orig transcript id | gnl|cribi|Naga_100021g27.8795.mrna |
| Orig protein id | gnl|cribi|Naga_100021g27.8795 |
| Gene | RPN1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:506768..508363 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=mRNA|length=2577bp
ATGTTGCCCATCCCGCTGAAGAGCAGCACGGGCGTGAATTTCAACCCTCT
GAGGGTGTACGTGTCGAACGAATACTCAAAGGAAGAGGCTGAGGCCGCCG
ATGGGGACTTTAAGGCTCTGGAGCGCATGAGAAGCATGGCCCTGCAAGCT
CGCGCTGCCACAGAGGCCTCGGTCAGAACTCTCCAAGCCTATTACACTCA
AGTAGACCGCCTCCAGGGCATCTTCCCAGTCCACGCGGACCATGTCCGGG
TGGCCTTCACCTGGCACGACGCCTTCCGCCCGACCAAGAAGTCCGCCGAG
ATGGACTTCAACTTCGAGCTCGCCGGCGTGCTCTTCAACATGGGCGCCGT
CAGGAGCAACATTGCTGCTTCAGTAGATCGTGCATCCGCTGAAGGGGTGA
GACTCGCGTGCCGGGAGTTTCAACTGGCGGCTGGTCTCTTCAAGTGCCTT
CGTGAGAAGGTGGTGGTCAACTTGAATTGCCATCTTCCCTCAGAGCTGAC
GCAAGAGGGTTTGCTGATGGTGGAGAACATTATGCTAGCACAGGCGCAAG
CCTGCTTCTACGAGAAGGCAATTGCCGACCAGAACAGCGCAAGCTCACGA
ATGAAATCGTCCGTGGTGGCACGACTGGCAGCGCAGGCTGCAGAAACGTA
CAGCGCGGCCCTCAAGTACGGCGAGTCGACTGCCATGGAGTCCGCGGGCC
TGGACCGCTCGTGGCCCGTCACGCTCCGTTTCCAGCGAGACTTCTACTCT
GCCGCGACTCAATACTATCAGGCGGAAGCGGTCAAGGAAAATGCCTTGGA
AAACGGAAAGGGGTACGGGGAGGAAGTCGTCCGCCTCCGCCAGGCCCGCA
GGTCTGTGGAGAGTGTGCTGGAGACCGCCATGCGGCAGCAAATGGGCCCC
GCCATCATCGGGAAGGCCGAGCTCCTGAAGAGTAAGATCATCAGAAATCT
AGCAGTAGCGGAAAAAGACAACGCGACAATTTATTTGGAGCCAATACCAG
CAGAGGCGTCCTTGAAACCTGTCAGCAAAGTTTGCATGGTTAAAATATTG
GAGCCGGAATTTCCTTTCGCTGCGACAGGCGACTCCCAGCCCCTTCTTTT
TGTGAACATTTTGCCCAAGGCCGTCAAGGAAACCTTGACAAGGGTCGAGA
GGCGATGCAGCAGCTTGGCTGCGGAGATGGAGCATGCGGGCCGTGAGGCC
TCCAAGAGCGCCCGGCAGCAGCTGGCGAAGGTGGGATTGCCGGGTTCCCT
CCAGGCGCATGAGAGCCCCGCGGGGCTCCCGGAGGCAACGTGGAAGAAGC
TGCAAGGCTTAAGAGAAAAGCACTCAACTATACCAGACTTGCAGGGCCAG
GTGGACGAGCTCCAAAGGGCGGCCGGCCAGGTTGCGGAGACGTTTTTGCA
GATCGAGAAGACGCTCAAAGAGGAGGAATCGAAAAGTGAGGGCTTTCGTG
CCAAATACGGTGCCGCCTGGGACGAGGTGGGGACATCCTCAGCTCAGCTG
ATGGCAGACACATGGAAGGAGGTGCGACATTTCCAGACACTGTTCTCTGC
GGCGCAGAAAAGCGACGAGTACCTGGCCTCCCGGCTGCAGTCCAACGAGC
TCGAGGAAGTCTCTGCCCTGTTGAGAGCCTCGCGCGGGGATCTGGATTCA
CGCCTGGTCCAGCCGGCCAGCTCTTCTTCCGCGGTGGTTGTAGATACGTC
GCGCCTGTCCGCACTCATGTTGCGCTTGGCAAAGCTCTTGGATGAGAGAG
ATTCCATCTTACAAAAGGCCAAGGCAGCACCGGAGGCAGTTTGCCTGAGG
CTGAAGGGCCGCCTGGTGGCAGGCGATGCCGCAGATGAGGCCCTTCCTGA
GGAGATGGCGTCGTTGGAGGCCCTAAAAAGCGAGTTGGCCGTCTCGACGG
CGGGGCAAGAGCCCTTGCTGCGAGAGATTTTGCAAGAGAACGAGCGGTTT
CAAGCAGGGCGAAAGGACGACCCGTCTCTGTTGGAGAGGGACCGACTGGT
GCAGCAACTGGAAACAGGGGTATTGCAGTGTCACGAGCTTCATGCCCAGC
TGGCAGAAGGCCGGGAGTTCTACGCTTCGGTGAGCAAACGTATACAGCAA
CTGCTCCTGGTGGCGGAGGACCAAGTCTACACGCAAGACATCCAGCGTCG
GGATTTTGAGATAGAGCTCGGACGGGCAGCGCATCGAAAGCAACAGGAGA
GCGCGGACCAAGATGTTGCAAAAAAGCTTTTTGACCAATTGAACATACAG
CATCAGGTAGAAGGCAATGCGAGCGCTCCTCCGCCCGGCCCCCCCCCACC
TTACCAGCAGCAGTATGGAAACACTCAAAGCGGAGCTCCACCTCCGCCAC
CTCCTAATCTCCCACCCCCTCCTGCATGTCTCTCAGCTCCGACACCTGCG
GGTCCACCACCTTCTTATGAGCAAGCTCAGGCGTTGCCCGTCGCCCCACC
TTACACTGATCAGGTCAAGATAGTACAGCTTACACAAATGGGGTTCCAAG
AAACTGCCGCAAAGCAAGCATTGGCTCAGCATCAAGGAGACTTGCAAGCC
GCTTTAAATGCGTTGCTGTCGGGATAA back to topprotein sequence of rna4855 >rna4855-protein ID=rna4855-protein|Name=rna4855|organism=Nannochloropsis gaditana|type=polypeptide|length=508bp
MFSEMARLPVVHIGRSALGLLLLLCSCTFFAQAQKNIEVVRKIDLSSAVV
RIDMTILANDLNGKYVVSFAKHLAPKLSFLQIAMGNQPLPWIRLPDAGDG
LAHFQAEVPQGMTEAKLTVFGTLAGALVPVPAEIELTENQLVQYLDSHTF
PSLYPTARQTTTFALGVSHIESFTKRDPYSRTGKDLVFGPITDIEGGAAA
SLSPITIHYQNNAPFVKALQAIREIEVSHWGNVAFEDFVEVKHAGAALKG
GFSRLDFQARGAPSAVRGLVAVLPLGARSIYYRDQIGNISTSVIQHGPDG
VELNLQSRFPLVGGWKNQFYQGYSVPVQELLTVGPSSGGVRRFTLTVPFS
VPFPEVWVEDLTVKVVLPEWAADVRVEIPFSVDEEHQTHRLTFLDSSLSG
GRPVLILKKRNVVAEHMQPMVLSYSFPTRAMLLEPLYLVLAFFSFFLVCM
IFARVDLRINADGGKKKSKTHNLKSSYSPSWEIAACGKVSKVEISRFAMI
ECRWRLVQ back to topmRNA from alignment at CM002464.1:506768..508363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=mRNA|length=1596bp|location=Sequence derived from alignment at CM002464.1:506768..508363- (Nannochloropsis gaditana)
ATGTTTTCGGAGATGGCGCGGCTGCCCGTCGTTCATATCGGCAGGTCGGC
GCTTGGACTTCTTCTCCTTCTTTGTTCCTGCACGTTCTTCGCCCAGGCTC
AGAAAAACATAGAAGTTGTGCGCAAAATAGATTTGAGCTCAGCGGTTGTT
CGTATCGATATGACGATTTTGGCCAACGACTTGAATGGTAAATATGTCGT
TTCCTTTGCGAAACATTTGGCTCCCAAACTCTCTTTCCTTCAAATCGCAA
TGGGCAACCAGCCCCTTCCCTGGATTCGTTTGCCCGATGCCGGGGACGGG
CTGGCCCACTTCCAGGCGGAAGTGCCTCAGGGCATGACTGAAGCCAAGCT
CACTGTATTTGGTACGCTTGCTGGTGCCTTGGTGCCAGTGCCAGCCGAAA
TAGAATTGACTGAGAATCAGTTAGTACAGTATCTCGATAGCCATACGTTC
CCCTCCCTTTACCCTACGGCGCGGCAGACCACGACTTTCGCGCTGGGAGT
CTCACACATCGAAAGTTTTACTAAGCGCGACCCTTACTCGAGAACGGGCA
AAGATCTGGTGTTCGGGCCTATCACGGACATCGAGGGTGGAGCCGCAGCG
TCGCTTTCGCCGATCACGATCCATTACCAGAACAACGCCCCGTTTGTCAA
GGCTCTGCAGGCTATCCGGGAGATCGAGGTGTCGCACTGGGGCAATGTGG
CCTTTGAAGATTTCGTGGAGGTAAAGCACGCGGGCGCGGCTCTGAAGGGA
GGTTTCTCTCGGCTCGACTTCCAAGCCCGCGGAGCGCCATCCGCCGTACG
AGGCCTGGTGGCCGTGCTCCCCCTGGGCGCCCGCAGCATCTACTACCGCG
ACCAGATCGGGAACATCTCCACCTCTGTGATCCAGCACGGGCCGGACGGT
GTGGAATTGAACTTGCAGTCGCGCTTTCCGCTGGTGGGGGGCTGGAAGAA
TCAATTCTATCAGGGCTACAGCGTGCCGGTGCAGGAGCTCCTCACGGTCG
GCCCTTCGAGCGGTGGTGTGAGGCGCTTCACCCTCACAGTGCCATTTTCT
GTTCCCTTCCCGGAGGTCTGGGTGGAGGATCTGACGGTCAAGGTGGTGCT
GCCAGAGTGGGCGGCAGACGTGCGCGTGGAGATCCCCTTCTCAGTGGACG
AAGAGCACCAGACCCACCGACTTACGTTCTTGGACTCGTCCTTGAGCGGA
GGTCGTCCTGTACTGATTCTGAAAAAGAGAAACGTGGTCGCAGAGCACAT
GCAGCCCATGGTACTCTCCTATTCTTTCCCCACGCGCGCCATGCTCCTGG
AACCTCTGTATTTGGTCCTTGCCTTCTTCTCCTTCTTTCTCGTCTGCATG
ATTTTCGCGCGCGTCGATCTTCGCATTAACGCCGACGGGGGCAAAAAGAA
GAGCAAGACGCAGTGAAGAGGGAGTGAGCAGCACCCACCAAAAGTTTTCC
AGAAATAGCGCGGCCTCCTGCAGGACGGAAGCAACTTAAAAAGCAGCTAC
AGTCCGTCTTGGGAGATCGCTGCGTGCGGCAAAGTAAGCAAAGTTGAAAT
CTCACGTTTTGCAATGATTGAATGCAGATGGAGATTAGTTCAGTAA back to topCoding sequence (CDS) from alignment at CM002464.1:506768..508363- >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=CDS|length=3054bp|location=Sequence derived from alignment at CM002464.1:506768..508363- (Nannochloropsis gaditana)
CAACTTAAAAAGCAGCTACAGTCCGTCTTGGGAGATCGCTGCGTGCGGCA
AAGTAAGCAAAGTTGAAATCTCACGTTTTGCAATGATTGAATGCAGATGG
AGATTAGTTCAGTAAATGTTTTCGGAGATGGCGCGGCTGCCCGTCGTTCA
TATCGGCAGGTCGGCGCTTGGACTTCTTCTCCTTCTTTGTTCCTGCACGT
TCTTCGCCCAGGCTCAGAAAAACATAGAAGTTGTGCGCAAAATAGATTTG
AGCTCAGCGGTTGTTCGTATCGATATGACGATTTTGGCCAACGACTTGAA
TGGTAAATATGTCGTTTCCTTTGCGAAACATTTGGCTCCCAAACTCTCTT
TCCTTCAAATCGCAATGGGCAACCAGCCCCTTCCCTGGATTCGTTTGCCC
GATGCCGGGGACGGGCTGGCCCACTTCCAGGCGGAAGTGCCTCAGGGCAT
GACTGAAGCCAAGCTCACTGTATTTGGTACGCTTGCTGGTGCCTTGGTGC
CAGTGCCAGCCGAAATAGAATTGACTGAGAATCAGTTAGTACAGTATCTC
GATAGCCATACGTTCCCCTCCCTTTACCCTACGGCGCGGCAGACCACGAC
TTTCGCGCTGGGAGTCTCACACATCGAAAGTTTTACTAAGCGCGACCCTT
ACTCGAGAACGGGCAAAGATCTGGTGTTCGGGCCTATCACGGACATCGAG
GGTGGAGCCGCAGCGTCGCTTTCGCCGATCACGATCCATTACCAGAACAA
CGCCCCGTTTGTCAAGGCTCTGCAGGCTATCCGGGAGATCGAGGTGTCGC
ACTGGGGCAATGTGGCCTTTGAAGATTTCGTGGAGGTAAAGCACGCGGGC
GCGGCTCTGAAGGGAGGTTTCTCTCGGCTCGACTTCCAAGCCCGCGGAGC
GCCATCCGCCGTACGAGGCCTGGTGGCCGTGCTCCCCCTGGGCGCCCGCA
GCATCTACTACCGCGACCAGATCGGGAACATCTCCACCTCTGTGATCCAG
CACGGGCCGGACGGTGTGGAATTGAACTTGCAGTCGCGCTTTCCGCTGGT
GGGGGGCTGGAAGAATCAATTCTATCAGGGCTACAGCGTGCCGGTGCAGG
AGCTCCTCACGGTCGGCCCTTCGAGCGGTGGTGTGAGGCGCTTCACCCTC
ACAGTGCCATTTTCTGTTCCCTTCCCGGAGGTCTGGGTGGAGGATCTGAC
GGTCAAGGTGGTGCTGCCAGAGTGGGCGGCAGACGTGCGCGTGGAGATCC
CCTTCTCAGTGGACGAAGAGCACCAGACCCACCGACTTACGTTCTTGGAC
TCGTCCTTGAGCGGAGGTCGTCCTGTACTGATTCTGAAAAAGAGAAACGT
GGTCGCAGAGCACATGCAGCCCATGGTACTCTCCTATTCTTTCCCCACGC
GCGCCATGCTCCTGGAACCTCTGTATTTGGTCCTTGCCTTCTTCTCCTTC
TTTCTCGTCTGCATGATTTTCGCGCGCGTCGATCTTCGCATTAACGCCGA
CGGGGGCAAAAAGAAGAGCAAGACGCACAACTTAAAAAGCAGCTACAGTC
CGTCTTGGGAGATCGCTGCGTGCGGCAAAGTAAGCAAAGTTGAAATCTCA
CGTTTTGCAATGATTGAATGCAGATGGAGATTAGTTCAGTAAATGTTTTC
GGAGATGGCGCGGCTGCCCGTCGTTCATATCGGCAGGTCGGCGCTTGGAC
TTCTTCTCCTTCTTTGTTCCTGCACGTTCTTCGCCCAGGCTCAGAAAAAC
ATAGAAGTTGTGCGCAAAATAGATTTGAGCTCAGCGGTTGTTCGTATCGA
TATGACGATTTTGGCCAACGACTTGAATGGTAAATATGTCGTTTCCTTTG
CGAAACATTTGGCTCCCAAACTCTCTTTCCTTCAAATCGCAATGGGCAAC
CAGCCCCTTCCCTGGATTCGTTTGCCCGATGCCGGGGACGGGCTGGCCCA
CTTCCAGGCGGAAGTGCCTCAGGGCATGACTGAAGCCAAGCTCACTGTAT
TTGGTACGCTTGCTGGTGCCTTGGTGCCAGTGCCAGCCGAAATAGAATTG
ACTGAGAATCAGTTAGTACAGTATCTCGATAGCCATACGTTCCCCTCCCT
TTACCCTACGGCGCGGCAGACCACGACTTTCGCGCTGGGAGTCTCACACA
TCGAAAGTTTTACTAAGCGCGACCCTTACTCGAGAACGGGCAAAGATCTG
GTGTTCGGGCCTATCACGGACATCGAGGGTGGAGCCGCAGCGTCGCTTTC
GCCGATCACGATCCATTACCAGAACAACGCCCCGTTTGTCAAGGCTCTGC
AGGCTATCCGGGAGATCGAGGTGTCGCACTGGGGCAATGTGGCCTTTGAA
GATTTCGTGGAGGTAAAGCACGCGGGCGCGGCTCTGAAGGGAGGTTTCTC
TCGGCTCGACTTCCAAGCCCGCGGAGCGCCATCCGCCGTACGAGGCCTGG
TGGCCGTGCTCCCCCTGGGCGCCCGCAGCATCTACTACCGCGACCAGATC
GGGAACATCTCCACCTCTGTGATCCAGCACGGGCCGGACGGTGTGGAATT
GAACTTGCAGTCGCGCTTTCCGCTGGTGGGGGGCTGGAAGAATCAATTCT
ATCAGGGCTACAGCGTGCCGGTGCAGGAGCTCCTCACGGTCGGCCCTTCG
AGCGGTGGTGTGAGGCGCTTCACCCTCACAGTGCCATTTTCTGTTCCCTT
CCCGGAGGTCTGGGTGGAGGATCTGACGGTCAAGGTGGTGCTGCCAGAGT
GGGCGGCAGACGTGCGCGTGGAGATCCCCTTCTCAGTGGACGAAGAGCAC
CAGACCCACCGACTTACGTTCTTGGACTCGTCCTTGAGCGGAGGTCGTCC
TGTACTGATTCTGAAAAAGAGAAACGTGGTCGCAGAGCACATGCAGCCCA
TGGTACTCTCCTATTCTTTCCCCACGCGCGCCATGCTCCTGGAACCTCTG
TATTTGGTCCTTGCCTTCTTCTCCTTCTTTCTCGTCTGCATGATTTTCGC
GCGCGTCGATCTTCGCATTAACGCCGACGGGGGCAAAAAGAAGAGCAAGA
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