rna4850, rna4850 (mRNA) Nannochloropsis gaditana

Overview
Namerna4850
Unique Namerna4850
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1062
Alignment locationCM002464.1:495405..497228 -

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Properties
Property NameValue
Productmisato-like protein
Orig transcript idgnl|cribi|Naga_100021g21.8781.mrna
Orig protein idgnl|cribi|Naga_100021g21.8781
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:495405..497228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100021g21gene4684Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25838.1cds4838Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4850rna4850-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4850 ID=rna4850|Name=rna4850|organism=Nannochloropsis gaditana|type=mRNA|length=1062bp
ATGGCTTCTGGTGCGATTGAACAGCGGAATCAGGATGCCACGGTGTATTG
CGGCGGTCTGGACGAGAAAGTGACGGAGGATTTGCTCTGGGAACTGATGC
AGAATGTAGGGCCCGTGGTACACGTACATATGCCCCGAGACAAGGTAACG
GGCATGCACCAGTGCTTCGGCTTCGTTGAGTTCCGCTCAGAAGAGGACGC
CGACTACGCCGTGAAGATCATGAACATGGTGCGCATGTACGGGAAGCCTC
TGCGGGTGAATAAGGCCTCTCAGGACAGGAAGACGGTGGACGTGGGGGCC
AACCTCTTCATTGGAAATTTGGCGGCCGAGGTGGACGAGAAGGATCTCTA
CGACACATTTTCAGCTTTTGGAGGTATCACGCAGCCACCTAAAGTGATGT
TTGATCCCGACACAGGGCACACGAAGGGTTTCGGCTTCGTCTCCTTTGAC
AGCTTCGAGGCGGCGGACTACGCGATCGAGTGCATGAACGGAGCATATTT
GGGCGGACGCCCAATCTGCGTTCAGTACGCCTACAAGAAGGACAGTAAGG
GCGAGCGGCACGGCTCCCAAGCAGAGCGCCTGCTCGCAGCCTCCAACCAG
CAGGCAGTCCGCTTCAAGGCCCACACCCTCTTCGCCACTGGGCCCGGGCA
GATCGGAACGGGCATGGGCGCCCCCCCTCCGCCTCCCTCCAACACAGGGG
CGGGCCAACCTCAGCACCAGCAACAGCAGTATTTTCCCCCGCCGCCTCCA
TTCGGGATGCAGGGCAGCATTCCCCCGCCTCCCCCTCCGCCTCCCCCCGG
CTACGGTCACCATCAGCAATACTACGCGCCGCCCCCACCTCCGCCGCCTC
CGCCCGCCATGGGCATGTACCAACCCCAGCAATATGGAAACGCTGGCCCC
CCTCCTCCCCCTCCACCGCCGCCCCACTTCTCAAGCCATCAACAGTTTCC
TCCTCCTCCCCCTCCTCCACCTCCTCATGGCCGACACGCGCATTTCCAAG
CCCCTCCGCCGCCCCCTCCGCCCCCCCCTCCCCCCCCTCCTCCAGGAAGC
CGAAGCCAGTAA
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protein sequence of rna4850

>rna4850-protein ID=rna4850-protein|Name=rna4850|organism=Nannochloropsis gaditana|type=polypeptide|length=607bp
MLDDHRHRRSGRGLASSKLLLLLPCVPARAEQSIRRGSDTSYAHAQAELS
VKCWSQVSFPQPYAVFVRLWGRSHFRPLYGRLSLDGDPIYEMKEVLTIQV
GSYANWVGAHFWNLQLTDSGLKEAPDTPVVSFDNHTCPFAHRRSKVYTEA
GRPRLLLFDVREEINYFCSRQYESHDQQESYSAQLGKEKAALLWDGATQV
HEMGRASVARDRPPRAVHGIGSLGQSPPIPASWSQAWRGETLDPERHCVE
AGKAHDMALGAGAWGPDRGADQLHRLLEECDAVQGLHLLLDLAGPASSLG
VSAAQEFAEEVRGGVVACYAFAAPDSPPSRGQDDWGKADAALGVKALLEA
GCLLIPSSRDPGLPEGLAGSSEAYRTSAVQATALEAVSGVYREDERVHMR
EWAQGIRVGAWDLAAVEIGRGDEAPDAWWKARPGPEGRDKSQDTATPSAK
FLSSLVSLAPRSHVRSSAFVADPVRRRRLSGLASAYGFRSPPWAVRTSLE
EALKDCHWLQPHLNFVSPDPLPLPPPLPGLGQAEDATGLEKGSAVSLIGC
TSAVGPFVEDITESFAGRGPGLRRRLREERGLLEEDLGEVDALLADVLET
GVPREAG
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mRNA from alignment at CM002464.1:495405..497228-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4850 ID=rna4850|Name=rna4850|organism=Nannochloropsis gaditana|type=mRNA|length=1824bp|location=Sequence derived from alignment at CM002464.1:495405..497228- (Nannochloropsis gaditana)
ATGCTCGACGATCACCGCCATCGCCGATCAGGCAGGGGGCTTGCGAGTAG
TAAATTACTGCTGCTCCTGCCCTGCGTGCCGGCACGTGCAGAGCAAAGCA
TCAGGAGAGGCTCAGACACATCTTACGCACATGCACAGGCAGAGCTTTCT
GTAAAGTGCTGGTCCCAGGTTTCCTTTCCACAACCTTATGCTGTCTTCGT
CAGGCTTTGGGGCCGGTCTCATTTCCGGCCATTATATGGCAGGTTATCAC
TCGACGGTGATCCAATTTACGAAATGAAAGAAGTCCTGACCATTCAAGTG
GGCTCTTATGCCAACTGGGTGGGGGCACATTTTTGGAACTTACAATTGAC
AGATTCTGGTTTGAAAGAAGCACCTGATACCCCTGTCGTCAGCTTCGATA
ACCACACTTGCCCCTTTGCCCATCGGCGCAGTAAAGTCTATACCGAGGCA
GGCCGCCCGCGACTACTTCTCTTTGATGTCCGCGAGGAGATTAATTATTT
TTGTTCGCGACAATACGAGAGTCATGACCAGCAGGAGTCATACTCCGCGC
AATTGGGAAAGGAAAAGGCGGCCTTGCTGTGGGACGGGGCAACCCAAGTC
CATGAAATGGGCCGCGCCTCAGTAGCGAGAGACCGACCACCCCGTGCAGT
CCATGGAATTGGCTCGCTCGGACAGTCTCCTCCGATCCCGGCGTCCTGGT
CTCAGGCCTGGCGGGGTGAGACCCTGGACCCAGAGCGACACTGCGTGGAG
GCGGGGAAGGCGCACGACATGGCCCTGGGCGCAGGGGCTTGGGGTCCTGA
CCGAGGAGCAGACCAGCTGCATCGGCTACTGGAGGAATGCGATGCAGTGC
AAGGCTTGCACCTGCTGCTGGACCTCGCGGGGCCGGCGTCGAGTTTGGGG
GTGAGCGCCGCACAGGAGTTCGCGGAGGAAGTGCGCGGCGGGGTGGTGGC
TTGCTACGCCTTCGCGGCCCCCGACTCCCCGCCTTCCCGCGGACAGGACG
ATTGGGGGAAGGCAGATGCCGCCCTGGGCGTCAAGGCTCTGTTGGAGGCA
GGGTGCCTCCTCATCCCCTCTTCCAGGGACCCGGGCCTTCCTGAGGGACT
GGCGGGGTCCTCGGAGGCTTACCGCACCAGCGCCGTTCAGGCGACAGCCC
TGGAGGCCGTCTCGGGCGTCTACCGGGAGGATGAGCGCGTGCACATGAGG
GAGTGGGCGCAGGGCATCAGGGTGGGGGCCTGGGACCTGGCGGCGGTGGA
GATCGGCCGCGGGGACGAGGCGCCCGACGCCTGGTGGAAGGCGCGACCCG
GGCCGGAAGGAAGGGACAAGAGCCAGGACACCGCCACGCCCTCTGCCAAA
TTCCTCTCCTCCCTAGTCTCCTTGGCGCCACGCTCCCACGTCCGCAGCTC
CGCTTTCGTCGCGGATCCGGTCCGTAGGCGCCGGCTGTCGGGGCTGGCCA
GCGCCTACGGCTTTCGATCGCCCCCGTGGGCAGTGCGCACCTCCCTGGAA
GAGGCGCTCAAGGACTGCCACTGGCTCCAGCCGCACCTGAACTTCGTCTC
ACCGGACCCCCTCCCCCTCCCCCCGCCTCTCCCGGGCCTGGGACAAGCTG
AGGACGCCACGGGCCTAGAGAAGGGCAGCGCCGTCTCTCTCATCGGCTGC
ACCTCCGCGGTGGGCCCCTTCGTCGAAGACATCACCGAGAGCTTCGCGGG
CAGAGGCCCCGGGCTCCGGCGGCGGCTGCGGGAGGAGAGAGGCCTGCTGG
AGGAGGACCTGGGAGAGGTGGACGCGCTGTTGGCGGACGTGCTGGAGACC
GGGGTGCCTCGCGAGGCGGGATGA
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Coding sequence (CDS) from alignment at CM002464.1:495405..497228-

>rna4850 ID=rna4850|Name=rna4850|organism=Nannochloropsis gaditana|type=CDS|length=1824bp|location=Sequence derived from alignment at CM002464.1:495405..497228- (Nannochloropsis gaditana)
ATGCTCGACGATCACCGCCATCGCCGATCAGGCAGGGGGCTTGCGAGTAG
TAAATTACTGCTGCTCCTGCCCTGCGTGCCGGCACGTGCAGAGCAAAGCA
TCAGGAGAGGCTCAGACACATCTTACGCACATGCACAGGCAGAGCTTTCT
GTAAAGTGCTGGTCCCAGGTTTCCTTTCCACAACCTTATGCTGTCTTCGT
CAGGCTTTGGGGCCGGTCTCATTTCCGGCCATTATATGGCAGGTTATCAC
TCGACGGTGATCCAATTTACGAAATGAAAGAAGTCCTGACCATTCAAGTG
GGCTCTTATGCCAACTGGGTGGGGGCACATTTTTGGAACTTACAATTGAC
AGATTCTGGTTTGAAAGAAGCACCTGATACCCCTGTCGTCAGCTTCGATA
ACCACACTTGCCCCTTTGCCCATCGGCGCAGTAAAGTCTATACCGAGGCA
GGCCGCCCGCGACTACTTCTCTTTGATGTCCGCGAGGAGATTAATTATTT
TTGTTCGCGACAATACGAGAGTCATGACCAGCAGGAGTCATACTCCGCGC
AATTGGGAAAGGAAAAGGCGGCCTTGCTGTGGGACGGGGCAACCCAAGTC
CATGAAATGGGCCGCGCCTCAGTAGCGAGAGACCGACCACCCCGTGCAGT
CCATGGAATTGGCTCGCTCGGACAGTCTCCTCCGATCCCGGCGTCCTGGT
CTCAGGCCTGGCGGGGTGAGACCCTGGACCCAGAGCGACACTGCGTGGAG
GCGGGGAAGGCGCACGACATGGCCCTGGGCGCAGGGGCTTGGGGTCCTGA
CCGAGGAGCAGACCAGCTGCATCGGCTACTGGAGGAATGCGATGCAGTGC
AAGGCTTGCACCTGCTGCTGGACCTCGCGGGGCCGGCGTCGAGTTTGGGG
GTGAGCGCCGCACAGGAGTTCGCGGAGGAAGTGCGCGGCGGGGTGGTGGC
TTGCTACGCCTTCGCGGCCCCCGACTCCCCGCCTTCCCGCGGACAGGACG
ATTGGGGGAAGGCAGATGCCGCCCTGGGCGTCAAGGCTCTGTTGGAGGCA
GGGTGCCTCCTCATCCCCTCTTCCAGGGACCCGGGCCTTCCTGAGGGACT
GGCGGGGTCCTCGGAGGCTTACCGCACCAGCGCCGTTCAGGCGACAGCCC
TGGAGGCCGTCTCGGGCGTCTACCGGGAGGATGAGCGCGTGCACATGAGG
GAGTGGGCGCAGGGCATCAGGGTGGGGGCCTGGGACCTGGCGGCGGTGGA
GATCGGCCGCGGGGACGAGGCGCCCGACGCCTGGTGGAAGGCGCGACCCG
GGCCGGAAGGAAGGGACAAGAGCCAGGACACCGCCACGCCCTCTGCCAAA
TTCCTCTCCTCCCTAGTCTCCTTGGCGCCACGCTCCCACGTCCGCAGCTC
CGCTTTCGTCGCGGATCCGGTCCGTAGGCGCCGGCTGTCGGGGCTGGCCA
GCGCCTACGGCTTTCGATCGCCCCCGTGGGCAGTGCGCACCTCCCTGGAA
GAGGCGCTCAAGGACTGCCACTGGCTCCAGCCGCACCTGAACTTCGTCTC
ACCGGACCCCCTCCCCCTCCCCCCGCCTCTCCCGGGCCTGGGACAAGCTG
AGGACGCCACGGGCCTAGAGAAGGGCAGCGCCGTCTCTCTCATCGGCTGC
ACCTCCGCGGTGGGCCCCTTCGTCGAAGACATCACCGAGAGCTTCGCGGG
CAGAGGCCCCGGGCTCCGGCGGCGGCTGCGGGAGGAGAGAGGCCTGCTGG
AGGAGGACCTGGGAGAGGTGGACGCGCTGTTGGCGGACGTGCTGGAGACC
GGGGTGCCTCGCGAGGCGGGATGA
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Synonyms
Publications