|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100021g13.8751.mrna |
| Orig protein id | gnl|cribi|Naga_100021g13.8751 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:483955..484657 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4843 ID=rna4843|Name=rna4843|organism=Nannochloropsis gaditana|type=mRNA|length=1314bp
ATGTGCGGATCGATCCCACAAACAAAGAGGAGCAGGAGCCCCAATTTAAT
CGTAATCAAGACGGCTTCCATCTTTACCTTCATCGCTGTGATGACGGGCG
CACCTGGTGCGGCCAGGAGTACTGCAGCATTTGTGCAACATCATGGCCGC
ATGTCCAAAAATTGGAGGATGTCAAGGAGTGTAGCTAGGACAATGACGTC
AAGCTCTACGCGTGGAAGAGGAGCCTCCCAGGAGGATGGAGGAAGTGAGG
GCCCGGACGAGCGGGTCAGTCTGGCCCCCATGATGGAGTACACCGACAGA
CATCTTCGGTTCTTGCTGCGCCTCCTCTCCAAGCGCATGGTTTTGTACAC
GGAGATGATTACCGCACCTACCCTGTACCACAACGAGGAAAGCCGCGACC
GCTTTCTGCGCTTCAACAGCCCGGCCGAGCACCCCGTGGTGCTCCAACTT
GGTGGTTCTGATCCTGAACAGCTGGCAGAAGCCAGCCGCCTCGCCTCTCC
CTACAAGTATAACGCGATGAACCTGAACTGCGGATGCCCGAGTGAGAGGG
TCTCTGGCAAGGGCTGCTTCGGGGCCGCTTTGATGCGCGAGCCCGAGCGC
GTCGCAGAGCTTTGTACGGCCATGAGCGAGGGAAGCCAGGGCAAGATTCC
TGTCACGGTGAAGTGCAGGATAGGGGTTGATGACGACGACAGCTACGAGC
AGCTCGCACGTTTCGTGGAGACCGTCTCGGGCGCGTCGCCAGTTCGCCAC
TTTTTGGTGCACGCCCGGAAGGCGATCCTGGGCGGGCTCTCCCCTGATCA
GAATCGGAAGGTCCCTCCCCTGAAGTACCCCTTCGTCTACCGGCTGAGTC
GGGAATTCCCGCACCTCCGCTTCACCCTCAATGGCGGGGTGCTCTCCTAC
GAGGACGTGGCCGAGCACCTGCGGGAGGGAGTGCACGGCGTCATGATCGG
GCGCGCCGTCGTTGCCCGTCCCTTCTACTGGAGCGATGTGGACGCACGCG
TGTTCGGGTCAGCGGATGGGAACCCGGGTCTGACGAGGAGGGAGGTTCTG
GACAGGTATGGGGCCTACGCGCAGGAGGAGGAAGCGAGGGGGGGGCCCAG
GATGCGTCGCTTGCTCATTAAGCCTGTGCACAATTTATTCGCGGGGGAGC
CGATGGGGAAGCGCTTCCGCGCAACGTTAGACCAAGCCTTGCTGGAGCCG
TCTCTGGATGTTCGGCAGGTGCTAGAGCGAGCCACTGCCGTGATGCCAGC
GGCCCTTCTGGAGGTGCCACCGGGATCGGCGGCCATCCCTGCTCCCGAGG
CTGTCAGACATTAG back to topprotein sequence of rna4843 >rna4843-protein ID=rna4843-protein|Name=rna4843|organism=Nannochloropsis gaditana|type=polypeptide|length=167bp
MGVGLCTRGRGDSMHKSLSRPWSKDLGWKMLAKMQIIREHVIWSLVGGYL
GSNRRRAFSILMCVCVLTHRFKEGAAEGGCLSVNLRSTSQDGKVRSIHAR
VADARTIKVRRGLAGCVCPSNFHVRFRRRRLSPSQTLDCGPTYQALRPAR
EGAETIHGQVEARVSKK back to topmRNA from alignment at CM002464.1:483955..484657- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4843 ID=rna4843|Name=rna4843|organism=Nannochloropsis gaditana|type=mRNA|length=703bp|location=Sequence derived from alignment at CM002464.1:483955..484657- (Nannochloropsis gaditana)
ATGGGTGTAGGCCTTTGTACTCGAGGCCGTGGTGACTCGATGCATAAATC
GCTCTCCCGCCCGTGGGTCTTTTTGTTTGCATATGATTATTAGGACAATG
TAAGAATTTAAAGAGCAAAGATCTAGGCTGGAAAATGCTCGCGAAAATGC
AAATAATAAGGGAGCATGTGATTTGGTCCCTTGTGGGAGGGTACCTCGGA
TCGAATAGGAGAAGAGCCTTCTCAATTTTGATGTGTGTGTGCGTCCTGAC
GCATAGATTCAAAGAAGGCGCGGCCGAGGGGGGTTGCTGTTGACAGAGTG
GATGTTGTCATATCCACGACTCTAATGCCCGCCGCCCGAGGCAGGCGTAC
ATTTGTACGTTGCACACAGGAAATAAAAATACACTAAAGTATCCGTAAAT
CTACGCAGTACCAGCCAGGACGGAAAAGTGCGGAGCATACACGCACGAGT
CGCTGATGCGAGAACGATTAAAGTCAGAAGAGGTCTCGCGGGAGTTGAAA
AGGCGCGGAAGCATGGATAAAGAGGGTGACAGCAATGACGACAGTGCGTG
TGCCCGAGTAATTTCCATGTGCGTTTTCGACGAAGAAGGCTATCGCCATC
TCAAACACTCGACTGCGGCCCAACTTACCAGGCTCTAAGGCCTGCTAGGG
AAGGGGCGGAGACTATCCATGGTCAAGTAGAAGCAAGAGTGTCTAAAAAG
TGA back to topCoding sequence (CDS) from alignment at CM002464.1:483955..484657- >rna4843 ID=rna4843|Name=rna4843|organism=Nannochloropsis gaditana|type=CDS|length=2016bp|location=Sequence derived from alignment at CM002464.1:483955..484657- (Nannochloropsis gaditana)
TGCGTGTGCCCGAGTAATTTCCATGTGCGTTTTCGACGAAGAAGGCTATC
GCCATCTCAAACACTCGACTGCGGCCCAACTTACCAGGCTCTAAGGCCTG
CTAGGGAAGGGGCGGAGACTATCCATGGTCAAGTAGAAGCAAGAGTGTCT
AAAAAGTGATATCCGTAAATCTACGCAGTACCAGCCAGGACGGAAAAGTG
CGGAGCATACACGCACGAGTCGCTGATGCGAGAACGATTAAAGTCAGAAG
AGGTCTCGCGGGAAGCAAAGATCTAGGCTGGAAAATGCTCGCGAAAATGC
AAATAATAAGGGAGCATGTGATTTGGTCCCTTGTGGGAGGGTACCTCGGA
TCGAATAGGAGAAGAGCCTTCTCAATTTTGATGTGTGTGTGCGTCCTGAC
GCATAGATTCAAAGAAGGCGCGGCCGAGGGGGGTTGCTATGGGTGTAGGC
CTTTGTACTCGAGGCCGTGGTGACTCGATGCATAAATCGCTCTCCCGCCC
GTGGTGCGTGTGCCCGAGTAATTTCCATGTGCGTTTTCGACGAAGAAGGC
TATCGCCATCTCAAACACTCGACTGCGGCCCAACTTACCAGGCTCTAAGG
CCTGCTAGGGAAGGGGCGGAGACTATCCATGGTCAAGTAGAAGCAAGAGT
GTCTAAAAAGTGATATCCGTAAATCTACGCAGTACCAGCCAGGACGGAAA
AGTGCGGAGCATACACGCACGAGTCGCTGATGCGAGAACGATTAAAGTCA
GAAGAGGTCTCGCGGGAAGCAAAGATCTAGGCTGGAAAATGCTCGCGAAA
ATGCAAATAATAAGGGAGCATGTGATTTGGTCCCTTGTGGGAGGGTACCT
CGGATCGAATAGGAGAAGAGCCTTCTCAATTTTGATGTGTGTGTGCGTCC
TGACGCATAGATTCAAAGAAGGCGCGGCCGAGGGGGGTTGCTATGGGTGT
AGGCCTTTGTACTCGAGGCCGTGGTGACTCGATGCATAAATCGCTCTCCC
GCCCGTGGTGCGTGTGCCCGAGTAATTTCCATGTGCGTTTTCGACGAAGA
AGGCTATCGCCATCTCAAACACTCGACTGCGGCCCAACTTACCAGGCTCT
AAGGCCTGCTAGGGAAGGGGCGGAGACTATCCATGGTCAAGTAGAAGCAA
GAGTGTCTAAAAAGTGATATCCGTAAATCTACGCAGTACCAGCCAGGACG
GAAAAGTGCGGAGCATACACGCACGAGTCGCTGATGCGAGAACGATTAAA
GTCAGAAGAGGTCTCGCGGGAAGCAAAGATCTAGGCTGGAAAATGCTCGC
GAAAATGCAAATAATAAGGGAGCATGTGATTTGGTCCCTTGTGGGAGGGT
ACCTCGGATCGAATAGGAGAAGAGCCTTCTCAATTTTGATGTGTGTGTGC
GTCCTGACGCATAGATTCAAAGAAGGCGCGGCCGAGGGGGGTTGCTATGG
GTGTAGGCCTTTGTACTCGAGGCCGTGGTGACTCGATGCATAAATCGCTC
TCCCGCCCGTGGTGCGTGTGCCCGAGTAATTTCCATGTGCGTTTTCGACG
AAGAAGGCTATCGCCATCTCAAACACTCGACTGCGGCCCAACTTACCAGG
CTCTAAGGCCTGCTAGGGAAGGGGCGGAGACTATCCATGGTCAAGTAGAA
GCAAGAGTGTCTAAAAAGTGATATCCGTAAATCTACGCAGTACCAGCCAG
GACGGAAAAGTGCGGAGCATACACGCACGAGTCGCTGATGCGAGAACGAT
TAAAGTCAGAAGAGGTCTCGCGGGAAGCAAAGATCTAGGCTGGAAAATGC
TCGCGAAAATGCAAATAATAAGGGAGCATGTGATTTGGTCCCTTGTGGGA
GGGTACCTCGGATCGAATAGGAGAAGAGCCTTCTCAATTTTGATGTGTGT
GTGCGTCCTGACGCATAGATTCAAAGAAGGCGCGGCCGAGGGGGGTTGCT
ATGGGTGTAGGCCTTTGTACTCGAGGCCGTGGTGACTCGATGCATAAATC
GCTCTCCCGCCCGTGG back to top
|