rna4832, rna4832 (mRNA) Nannochloropsis gaditana

Overview
Namerna4832
Unique Namerna4832
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1287
Alignment locationCM002464.1:463663..465892 -

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Properties
Property NameValue
Productarsenite methyltransferase
Orig transcript idgnl|cribi|Naga_100021g3.8789.mrna
Orig protein idgnl|cribi|Naga_100021g3.8789
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:463663..465892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100021g3gene4667Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4832rna4832-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25846.1cds4820Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4832 ID=rna4832|Name=rna4832|organism=Nannochloropsis gaditana|type=mRNA|length=1287bp
TCATTTTGTGCTCCTGTTGAGAGCTGGCACACTGAAAAAGGGTTTCTCAA
ATCATGTTTGGGTGCTCAGTTGCCGGGGACAAAGGTCATAAATTACCATA
AGGCCTTCCCCAAGGACGCGAATCGTTGCGCTTGATGATGTCACTACGAT
ATGGCCTCACATTTTCACGCTTCATGCGCGCACATTCCAGACAAATTTAC
GTGCGTGAAATGGTCAGGTCCTACTGGCTACGCGGCTAGTACTTTGCTCG
GGAAAAGGACCCCGCATTCAGCATGGCAACAGGCACCCCGAGCAACAAGA
CTGCCCTACGCAAGGGTTTTGGTCTCATGGATTGGGTAAAGCTGACAACA
TCCACCCGGGACTTGTCCGGGGTGCTGCGCATGGGCGGCCTGAGGGGATA
CCGGATGGAAGAAGTCGCCCGGCACCGCACGTCAAACGATGCCTGGGCCG
TGTTTGCGGGTAAAGTCTACAATCTGACTCCCTATCTGCCGTACCATCCC
GGAGGGGCCAATATAATCGTAAAGGCGGCAGGCACGGACTGCACTGCACT
CTTCAATAAGCATCATCCGTGGGTGAACCTGGAGGGATTGGCAGGGAAAC
TGGTCGTCGGGTACCTAATAGAGGAAGAAGGCGCGACTCCGAAGGACACA
GGGTTAGCTCAGGAAGAGTCGCCACAGGCAGGGCTTGACGGTAGTGCTTC
GTCCGGGCCGGCGGCGGAGAGGGCGGGAGAAGACGGTGACTCTTTGGTAA
CCGATGCTGCGGGGCAGTCGCCTGTGGACGCGTGTGTGGGACTACTAGCA
CCTCCGCCGAAACGCTTCAGCATTACGGCAGCATTCGGTACAGAGGAAGA
CTTCGCAGCAAGTATAGAGGAGAACGGGGCAGTAAGAGAGGGGTGACTCT
GGCGATACGGCGGAGAAGAGGAGAATCCTGTGTAGACCTGAAAGTATTCA
CAACTGTACATCGAAATGGCCCTAGGATGCAAGAAAGGAGAGCAATGCCG
GAAACTTGATGCTTTGTGAGGTGAAAGGCAAGGAAAATTCGCGGGCACAT
GCTTGTGAGAACTACGCATGCGCATGACAAGCGACCTGAAAGAGCGAAAG
CTTTCGCGGCTGCCTGGTTATGGCGTTCGGGTCTCCGCCCGATCCTTTCG
GTGTGCGTTTTGCACCAGACGCACGCATGCAAATAAAGAAAAGAGTAACC
CAATGCGGTCTTGGGAAAAACTTCCGACACTCGGATAAGTGCCGGGCCCG
TCCTAATTATTTGACGTAATTTTCCTCGCTTATCCCC
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protein sequence of rna4832

>rna4832-protein ID=rna4832-protein|Name=rna4832|organism=Nannochloropsis gaditana|type=polypeptide|length=395bp
MPPFSDISLSPAKSGQQGSNTSARELSAPPFWQYCIVYASHMSTYDLPFT
CLLYRVFVGLETMSNGESNVKENVREYYGSKLQTNADLKTTACCAASIPK
KLRALLKDIHENVLEKFYGCGSPLPEGLEGCTVLDLGSGSGRDSFVASRL
VGAHGTVIGVDMTEEQLAVARAHVDWHMERYGYDKANVTFRHGVIEDLAS
MGIADASVDVCVSNCVLNLSPDKAQVLREIFRVLKPGGELYFSDVFCDRR
LPGTLREDQEVLGECLGGALYIEDVRRLLAELGCKDYRIMEQTEIQITDE
AIAAKVGLARFFSLTLRCFKLPELEDRCEDFGQFATYLGTLDPVSFELDQ
GHQFEAGRARAVCGNTAAMVSAGIDGMRVLKSILSAWGRWQGERE
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mRNA from alignment at CM002464.1:463663..465892-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4832 ID=rna4832|Name=rna4832|organism=Nannochloropsis gaditana|type=mRNA|length=2230bp|location=Sequence derived from alignment at CM002464.1:463663..465892- (Nannochloropsis gaditana)
TGAAATCATGATGTGAGAGAATGGAAAATGCCACCTTTTTCGGATATCTC CTTAAGTCCAGCCAAATCAGGTCAACAAGGCAGCAACACGTCCGCTCGTG AACTTTCGGCTCCTCCTTTTTGGCAGTACTGCATCGTTTATGCCTCACAC ATGTCAACTTACGATCTACCATTTACGTGTCTATTGTACAGAGTTTTTGT GGGGTTGGAAACGATGTCTAACGGAGAGTCTAACGTCAAAGAGAACGTGC GAGAGTAAGTAGTTGTAGAACCTCCCACTCTCTTTTTCACACTGTGTGCT ACTGCGTCTTGACGAAGAGACATGTCCTGCTGTCCTTACTTAGTACCGGA TTTGCAAAGAATTTATTCCGATTGAGATGTCATACACCGCTCGCAAAATT TATCAAAAATTACGCCACATACTGTTCAGATACTACGGGTCCAAGCTACA AACAAATGCTGATTTAAAGACGACGGCATGCTGTGCGGCCAGTATTCCGA AGAAGCTCCGCGCGCTGTTGAAAGACATCCATGAGAATGTACTCGAGAAG TTCTACGGTTGTGGAAGCCCCTTGCCGGAGGGCCTGGAGGGATGCACAGT GCTGGACCTCGGTTCGGGCTCAGGGAGGGACTCCTTCGTCGGTATGGCTG GCGGAGGGGCACACTCACGCGTTTCATGCTCTCGCTCACTGACATAGAAA AAAACTGCATTTGATTGCGCCGGATCGATCCCTCCTCCTTCTCCCATCAA TCTCGCACCCTCACACCTACCTCCTCTGCCTCCACTCTCGACAGCTTCGA GACTTGTTGGCGCGCATGGCACAGTTATTGGTGTCGACATGACTGAGGAG CAGCTGGCAGTAGCGCGGGCTCATGTGGATTGGCACATGGAGCGCTACGG GTACGACAAAGCCAACGTGACGTTCCGCCATGGCGTCATTGAGGACTTGG CGAGCATGGGCATAGCGGACGCCTCCGTGGACGTGTGTGTGAGCAACTGC GTGCTCAATCTGTCCCCCGACAAGGCGCAGGTTTTGAGGGAAATTTTTCG CGTTTTAAAACCAGGGGGTGAACTCTATTTTTCGGACGTGTTCTGCGACC GGCGGCTGCCGGGCACCCTGAGGGAGGATCAAGAGGTGCTAGGGGAGTGC TTGGGCGGAGCCTTATACATCGGTAGGAGCTTTTCAGCTTCCTTGCATGC ACTCCCCCTCCCCTGCCTTCTCATGAAACCCAACCCCTCCCTTATAACAT CCCCCCCCCCTCCATCCCTTTGACCCCCTCAAGAGGATGTCCGGCGCCTG CTTGCCGAGCTTGGCTGTAAGGATTACCGAATCATGGAGCAGACCGAAAT CCAGATCACGGACGAGGCGATCGCCGCCAAGGTGGGCCTGGCCCGCTTTT TCAGCCTGACACTGCGCTGCTTCAAGCTCCCGGAGCTGGAGGATCGATGC GAGGACTTCGGTCAGTTCGCCACCTACCTCGGGACCCTGGACCCTGTCTC TTTCGAGCTCGACCAGGGCCATCAGTTCGAGGCCGGGCGGGCGCGGGCCG TGTGCGGGAACACGGCGGCCATGGTGAGTGCTGGGATCGACGGGATGCGC GTGCTTAAGTCGATCCTGTCCGCGTGGGGTCGATGGCAGGGCGAAAGAGA ATGAAGCTCCTTCACACGAGGGGTACCCTCGCTCTTGGCTTTCCCCCTTT CCGTTCAACAGCTTACCCACACTCGCTTTGCGCCTCATTTCTCCGTCACG GGGGACACTTCCGTCCACTACGGCCTCTTTGGAAGCTCCGGCGTCCTCGT CTCAAGTCCGCATACCATAGGCAGTACCTTCGGCGCGTGCTGCTGAGCAA AGGTTTACGAAACGACAGGGGATAAGGGGGATAAGCGAGGAAAATTACGT CAAATAATTAGGACGGGCCCGGCACTTATCCGAGTGTCGGAAGTTTTTCC CAAGACCGCATTGGGTTACTCTTTTCTTTATTTGCATGCGTGCGTCTGGT GCAAAACGCACACCGAAAGGATCGGGCGGAGACCCGAACGCCATAACCAG GCAGCCGCGAAAGCTTTCGCTCTTTCAGGTCGCTTGTCATGCGCATGCGT AGTTCTCACAAGCATGTGCCCGCGAATTTTCCTTGCCTTTCACCTCACAA AGCATCAAGTTTCCGGCATTGCTCTCCTTTCTTGCATCCTAGGGCCATTT CGATGTACAGTTGTGAATACTTTCAGGTCT
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Coding sequence (CDS) from alignment at CM002464.1:463663..465892-

>rna4832 ID=rna4832|Name=rna4832|organism=Nannochloropsis gaditana|type=CDS|length=4752bp|location=Sequence derived from alignment at CM002464.1:463663..465892- (Nannochloropsis gaditana)
AGGATGTCCGGCGCCTGCTTGCCGAGCTTGGCTGTAAGGATTACCGAATC
ATGGAGCAGACCGAAATCCAGATCACGGACGAGGCGATCGCCGCCAAGGT
GGGCCTGGCCCGCTTTTTCAGCCTGACACTGCGCTGCTTCAAGCTCCCGG
AGCTGGAGGATCGATGCGAGGACTTCGGTCAGTTCGCCACCTACCTCGGG
ACCCTGGACCCTGTCTCTTTCGAGCTCGACCAGGGCCATCAGTTCGAGGC
CGGGCGGGCGCGGGCCGTGTGCGGGAACACGGCGGCCATGGTGAGTGCTG
GGATCGACGGGATGCGCGTGCTTAAGTCGATCCTGTCCGCGTGGGGTCGA
TGGCAGGGCGAAAGAGAATGACTTCGAGACTTGTTGGCGCGCATGGCACA
GTTATTGGTGTCGACATGACTGAGGAGCAGCTGGCAGTAGCGCGGGCTCA
TGTGGATTGGCACATGGAGCGCTACGGGTACGACAAAGCCAACGTGACGT
TCCGCCATGGCGTCATTGAGGACTTGGCGAGCATGGGCATAGCGGACGCC
TCCGTGGACGTGTGTGTGAGCAACTGCGTGCTCAATCTGTCCCCCGACAA
GGCGCAGGTTTTGAGGGAAATTTTTCGCGTTTTAAAACCAGGGGGTGAAC
TCTATTTTTCGGACGTGTTCTGCGACCGGCGGCTGCCGGGCACCCTGAGG
GAGGATCAAGAGGTGCTAGGGGAGTGCTTGGGCGGAGCCTTATACATCGA
TACTACGGGTCCAAGCTACAAACAAATGCTGATTTAAAGACGACGGCATG
CTGTGCGGCCAGTATTCCGAAGAAGCTCCGCGCGCTGTTGAAAGACATCC
ATGAGAATGTACTCGAGAAGTTCTACGGTTGTGGAAGCCCCTTGCCGGAG
GGCCTGGAGGGATGCACAGTGCTGGACCTCGGTTCGGGCTCAGGGAGGGA
CTCCTTCGTCGATGCCACCTTTTTCGGATATCTCCTTAAGTCCAGCCAAA
TCAGGTCAACAAGGCAGCAACACGTCCGCTCGTGAACTTTCGGCTCCTCC
TTTTTGGCAGTACTGCATCGTTTATGCCTCACACATGTCAACTTACGATC
TACCATTTACGTGTCTATTGTACAGAGTTTTTGTGGGGTTGGAAACGATG
TCTAACGGAGAGTCTAACGTCAAAGAGAACGTGCGAGAAGGATGTCCGGC
GCCTGCTTGCCGAGCTTGGCTGTAAGGATTACCGAATCATGGAGCAGACC
GAAATCCAGATCACGGACGAGGCGATCGCCGCCAAGGTGGGCCTGGCCCG
CTTTTTCAGCCTGACACTGCGCTGCTTCAAGCTCCCGGAGCTGGAGGATC
GATGCGAGGACTTCGGTCAGTTCGCCACCTACCTCGGGACCCTGGACCCT
GTCTCTTTCGAGCTCGACCAGGGCCATCAGTTCGAGGCCGGGCGGGCGCG
GGCCGTGTGCGGGAACACGGCGGCCATGGTGAGTGCTGGGATCGACGGGA
TGCGCGTGCTTAAGTCGATCCTGTCCGCGTGGGGTCGATGGCAGGGCGAA
AGAGAATGACTTCGAGACTTGTTGGCGCGCATGGCACAGTTATTGGTGTC
GACATGACTGAGGAGCAGCTGGCAGTAGCGCGGGCTCATGTGGATTGGCA
CATGGAGCGCTACGGGTACGACAAAGCCAACGTGACGTTCCGCCATGGCG
TCATTGAGGACTTGGCGAGCATGGGCATAGCGGACGCCTCCGTGGACGTG
TGTGTGAGCAACTGCGTGCTCAATCTGTCCCCCGACAAGGCGCAGGTTTT
GAGGGAAATTTTTCGCGTTTTAAAACCAGGGGGTGAACTCTATTTTTCGG
ACGTGTTCTGCGACCGGCGGCTGCCGGGCACCCTGAGGGAGGATCAAGAG
GTGCTAGGGGAGTGCTTGGGCGGAGCCTTATACATCGATACTACGGGTCC
AAGCTACAAACAAATGCTGATTTAAAGACGACGGCATGCTGTGCGGCCAG
TATTCCGAAGAAGCTCCGCGCGCTGTTGAAAGACATCCATGAGAATGTAC
TCGAGAAGTTCTACGGTTGTGGAAGCCCCTTGCCGGAGGGCCTGGAGGGA
TGCACAGTGCTGGACCTCGGTTCGGGCTCAGGGAGGGACTCCTTCGTCGA
TGCCACCTTTTTCGGATATCTCCTTAAGTCCAGCCAAATCAGGTCAACAA
GGCAGCAACACGTCCGCTCGTGAACTTTCGGCTCCTCCTTTTTGGCAGTA
CTGCATCGTTTATGCCTCACACATGTCAACTTACGATCTACCATTTACGT
GTCTATTGTACAGAGTTTTTGTGGGGTTGGAAACGATGTCTAACGGAGAG
TCTAACGTCAAAGAGAACGTGCGAGAAGGATGTCCGGCGCCTGCTTGCCG
AGCTTGGCTGTAAGGATTACCGAATCATGGAGCAGACCGAAATCCAGATC
ACGGACGAGGCGATCGCCGCCAAGGTGGGCCTGGCCCGCTTTTTCAGCCT
GACACTGCGCTGCTTCAAGCTCCCGGAGCTGGAGGATCGATGCGAGGACT
TCGGTCAGTTCGCCACCTACCTCGGGACCCTGGACCCTGTCTCTTTCGAG
CTCGACCAGGGCCATCAGTTCGAGGCCGGGCGGGCGCGGGCCGTGTGCGG
GAACACGGCGGCCATGGTGAGTGCTGGGATCGACGGGATGCGCGTGCTTA
AGTCGATCCTGTCCGCGTGGGGTCGATGGCAGGGCGAAAGAGAATGACTT
CGAGACTTGTTGGCGCGCATGGCACAGTTATTGGTGTCGACATGACTGAG
GAGCAGCTGGCAGTAGCGCGGGCTCATGTGGATTGGCACATGGAGCGCTA
CGGGTACGACAAAGCCAACGTGACGTTCCGCCATGGCGTCATTGAGGACT
TGGCGAGCATGGGCATAGCGGACGCCTCCGTGGACGTGTGTGTGAGCAAC
TGCGTGCTCAATCTGTCCCCCGACAAGGCGCAGGTTTTGAGGGAAATTTT
TCGCGTTTTAAAACCAGGGGGTGAACTCTATTTTTCGGACGTGTTCTGCG
ACCGGCGGCTGCCGGGCACCCTGAGGGAGGATCAAGAGGTGCTAGGGGAG
TGCTTGGGCGGAGCCTTATACATCGATACTACGGGTCCAAGCTACAAACA
AATGCTGATTTAAAGACGACGGCATGCTGTGCGGCCAGTATTCCGAAGAA
GCTCCGCGCGCTGTTGAAAGACATCCATGAGAATGTACTCGAGAAGTTCT
ACGGTTGTGGAAGCCCCTTGCCGGAGGGCCTGGAGGGATGCACAGTGCTG
GACCTCGGTTCGGGCTCAGGGAGGGACTCCTTCGTCGATGCCACCTTTTT
CGGATATCTCCTTAAGTCCAGCCAAATCAGGTCAACAAGGCAGCAACACG
TCCGCTCGTGAACTTTCGGCTCCTCCTTTTTGGCAGTACTGCATCGTTTA
TGCCTCACACATGTCAACTTACGATCTACCATTTACGTGTCTATTGTACA
GAGTTTTTGTGGGGTTGGAAACGATGTCTAACGGAGAGTCTAACGTCAAA
GAGAACGTGCGAGAAGGATGTCCGGCGCCTGCTTGCCGAGCTTGGCTGTA
AGGATTACCGAATCATGGAGCAGACCGAAATCCAGATCACGGACGAGGCG
ATCGCCGCCAAGGTGGGCCTGGCCCGCTTTTTCAGCCTGACACTGCGCTG
CTTCAAGCTCCCGGAGCTGGAGGATCGATGCGAGGACTTCGGTCAGTTCG
CCACCTACCTCGGGACCCTGGACCCTGTCTCTTTCGAGCTCGACCAGGGC
CATCAGTTCGAGGCCGGGCGGGCGCGGGCCGTGTGCGGGAACACGGCGGC
CATGGTGAGTGCTGGGATCGACGGGATGCGCGTGCTTAAGTCGATCCTGT
CCGCGTGGGGTCGATGGCAGGGCGAAAGAGAATGACTTCGAGACTTGTTG
GCGCGCATGGCACAGTTATTGGTGTCGACATGACTGAGGAGCAGCTGGCA
GTAGCGCGGGCTCATGTGGATTGGCACATGGAGCGCTACGGGTACGACAA
AGCCAACGTGACGTTCCGCCATGGCGTCATTGAGGACTTGGCGAGCATGG
GCATAGCGGACGCCTCCGTGGACGTGTGTGTGAGCAACTGCGTGCTCAAT
CTGTCCCCCGACAAGGCGCAGGTTTTGAGGGAAATTTTTCGCGTTTTAAA
ACCAGGGGGTGAACTCTATTTTTCGGACGTGTTCTGCGACCGGCGGCTGC
CGGGCACCCTGAGGGAGGATCAAGAGGTGCTAGGGGAGTGCTTGGGCGGA
GCCTTATACATCGATACTACGGGTCCAAGCTACAAACAAATGCTGATTTA
AAGACGACGGCATGCTGTGCGGCCAGTATTCCGAAGAAGCTCCGCGCGCT
GTTGAAAGACATCCATGAGAATGTACTCGAGAAGTTCTACGGTTGTGGAA
GCCCCTTGCCGGAGGGCCTGGAGGGATGCACAGTGCTGGACCTCGGTTCG
GGCTCAGGGAGGGACTCCTTCGTCGATGCCACCTTTTTCGGATATCTCCT
TAAGTCCAGCCAAATCAGGTCAACAAGGCAGCAACACGTCCGCTCGTGAA
CTTTCGGCTCCTCCTTTTTGGCAGTACTGCATCGTTTATGCCTCACACAT
GTCAACTTACGATCTACCATTTACGTGTCTATTGTACAGAGTTTTTGTGG
GGTTGGAAACGATGTCTAACGGAGAGTCTAACGTCAAAGAGAACGTGCGA
GA
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Synonyms
Publications