rna4814, rna4814 (mRNA) Nannochloropsis gaditana

Overview
Namerna4814
Unique Namerna4814
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1380
Alignment locationCM002464.1:432785..435186 -

Link to JBrowse

Properties
Property NameValue
Productn-acetyl-gamma-glutamyl-phosphate reductase
Orig transcript idgnl|cribi|Naga_100054g25.5549.mrna
Orig protein idgnl|cribi|Naga_100054g25.5549
GeneNAG-PR
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:432785..435186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NAG-PRgene4650Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4814rna4814-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25857.1cds4802Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4814 ID=rna4814|Name=rna4814|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp
TCAACCGTTACGCCGCCCCAGCACGAGAAACATCATGCGAGCGGCTCTAC
ATAGCCTTTGTATGTGCCGGCACTCTGGAAAAATCTTGTGTGGACTGATT
ACACTTTGATTCAATCATACGTGACAGGGTGATGTCGCTTGCGCCTTGGC
CCAAGCGGCGGCCTGATGGATCCTTTGAAGCCTCCAAACTACCGATCTTT
GAAAGGAGCGCGACTTTCAGCGGGAGGAAGCGTGCGAGGTCAGCAAGCGA
GACGGAGCAGCAACAATATGATAGCAGTTGCCCTCTTCAAAATGATGTGT
CATCGGAGCATCTTTCGGATGTAGTTGCTGCTATTTTGCTTTTAATCCAA
CGCTTCTACCAGGGAACTAGCACGAACGATTCTCGGAGGCTGAAAATGGA
AAACTGTCCTGTAGTCCTGCAACATCAGCTCTACACGGTCCTAGACGATC
ATACGTCCGTTGACGTCGAACTCGAGGACTTAAAGACGAGCAATCATGTG
CGCCTATTTCGTCTCCTTACTTTGCGGCGCGACATTGGTGTGCTCCTCAC
CTCCACTTACAAAGCTCGCGTTCAGGCCGCCTTTGCAGCGTTCGCTCAAC
AAGAGGGAACACGAGGACGGGATGAGAATATCACAGAATCAATATGCAAC
AGTGTGACTGAGAGAGAAGAAGATGGAAACGACAAGAGATCCAGAAACAG
CAGCGTGCAGGCCTCCAAGCTCTCGGCGCGACACATGGCCCTCGTCTCCG
ATTTCTTCCTGAAGACCGTGGACCGAGTCACGAATATAATTATGACACAA
CACCAGCTAGAGAGTCTGTGGGGAGAGTACACGCAGAGTATTTCCCACTC
CCAAGCGCCCGCTTGCCCTAGATCAAGCATGTCCGCCGGCCCTGGTAAAA
GGCGAGCTGCTCCTTCCCTGCTTCCGAGCATCGATGAAGTCACACGCGTT
CTCATTCATTATGGTTTTCTCGCGCGGCGTGTCGATGCTGTGTACGAAGG
ACCTGCATATTGGTTCTCAGCCCCCGAACTCGGAAGTGTGACCGCCTCCC
TGCCTCGCGGCCGCAAGGCCATCCTGGCGGCCCTGGCACGGTCGCGGTAT
AAGGAACTTTCGGAGCAGAACTTGGGGGCTTTGCGGCTTAAGGGGACAGC
GCTCTCGCTCTCTTTTCATATGGCGGATCTGGTTGGGAGTGGGGAGGTTT
TGGCCGTACCCACAGCCTCTGGAATGTTTTTAAGATTGCCCGCGCGAACG
GCGTCCGGCGCCACTGGAAGATGACGTGAAGGCCATTGATCCAAGAAACA
TGCCGGCGCAATTTTGAAAATTATCTTGTGAAAGAAAATCTAGTCAAATG
AATATCAAATTAGATAGTACCCAGAAGGTA
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protein sequence of rna4814

>rna4814-protein ID=rna4814-protein|Name=rna4814|organism=Nannochloropsis gaditana|type=polypeptide|length=377bp
MQTTCDLNPRRGRTTTLSAARGGSSVPSARVGILGASGYTGAELMRILLQ
HPYAKIKYLTADRSAGLAFSEVFPQFSYVKDLPRLSKFEDMSPEKWGQEV
DVIFCCLPHATTQLVIASLPPSVKVVDLSADFRLADIEVYKEWYGGEHKA
PELQKEAVYAITEFSRDQVKACRLVANPGCYPTAAQLPLVPLLRSGLVSQ
EDIIIDAKSGTTGAGRSLKQNILYCEVTDGISAYGIASHRHAPEIEQGLR
EAAGGKEVVINFTPHLMPMSRGILESIYVKTAPGKTAADLKAHLQGLYAQ
EPFVHVLEGSKVPETRHVRGSNHCFINVFADRVPGRAIIVSAIDNLVKGA
SGQAVQNFNVMFGYPETTGLLSPPMFP
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mRNA from alignment at CM002464.1:432785..435186-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4814 ID=rna4814|Name=rna4814|organism=Nannochloropsis gaditana|type=mRNA|length=2402bp|location=Sequence derived from alignment at CM002464.1:432785..435186- (Nannochloropsis gaditana)
GATACTTGGCTTCTCGTTCAATTCAAGCCCCTTCCTGCTCGGAGTCAGAC GGAGAAATGAACACGCATGCCGCGATCTCACAGTGCGAGATGCAACCGTA TCATACCCACCTGTATCATAAATCAAGCCAGCCCCTCTTGACATTTCTAC AAATGTGGGTTCCATGAAGTCGCCAAATGCCTGGAAGCAGCGAAGAGCAT CTCCTACGCCCCACCCCATCGTGTCCCGCGACAAATTCCTGAAAATCCAC GTATGGACGCAAGCTTGACACTGAGTACTTTGATTTCCATTCATATCGCA GGAGGAAGCAAAAAATATGTTGCACAACGTTGCGTCGTTGTCGAGAACAG TGAGCTGCTTCTGCCTTCTGGTGGCCTCCGCACAGGCTTTCCTCCTTCAA TTTAGCGCTAGCCCCTTTGGACGCACCAAGGCATTGGTGAGTGATGAATC GGGCTTCTTACCGCGTGCACATTTGACGCTATGATGTATTACACCATCCA TGCAGACGACCTGTGATCTCAACCCTCGACGAGGTCGTACAACGACCTTG TCCGCCGCCAGAGGGGGGTCATCGGTGCCCAGCGCGAGGGTCGGCATTTT GGGTGCTTCTGGGTACACGGGTGCGGAATTGATGCGCATCCTTCTGCAGC ATCCATATGCCAAAATCAAATACCTTACGGCGGATCGCTCGGCAGGCCTG GCTTTCAGCGAGGTCTTTCCGCAGTTCAGCTACGTGAAGGTGCGTCTCAC TGAAAGCTGCGCTTCATCTCGATGAAGAGTCGTGACGAAAACAAGGTGGA GCAAGAGGCGTGGTTTAATCCTATAGCGCCTAAAGTCAGACAGTGTTTAG ACGAAAGACTGAAATCGAATACGTCCGTCCCTGTGTTCGACCCAGGATCT CCCCAGGCTCAGCAAATTCGAGGACATGTCTCCCGAGAAGTGGGGCCAGG AGGTCGATGTCATCTTCTGCTGCCTCCCACACGCCACAACCCAGCTGGTG ATCGCCTCGTTGCCGCCCAGCGTTAAGGTGGTGGACCTATCCGCCGACTT CAGGCTCGCGGACATCGAGGTGTACAAGGAGTGGTACGGGGGCGAGCACA AGGCCCCCGAGCTCCAGAAAGAGGCCGTCTATGCCATCACAGAGTTTAGC CGAGATCAGGTAAAAGCTTGCCGGCTGGTGGCCAATCCTGGCTGCTATCC TACCGCGGCCCAGCTCCCGCTCGTGCCGCTCCTGCGGAGCGGCCTGGTCT CCCAGGAAGACATCATCATCGACGCCAAGTCAGGCACGACAGGCGCGGGG CGCTCCCTGAAGCAGGTAGGAAGGGAGTTATAGGGTACACATGGCGCGAA GAAGCTAAAGGGAGGATTCACTAAGCGCGAGTGGGGTGGTGAGGATAACG CGCCGTATCGACCAGCCGCGTCACCCCCAACCGCATGGTGGATGCTCCCG TTTTTCCACACCCCAGAACATTCTCTACTGCGAAGTAACGGATGGGATCT CTGCCTACGGAATCGCTTCCCACCGACACGCTCCCGAGATCGAGCAGGGC CTCCGGGAGGCGGCAGGCGGCAAGGAGGTGGTCATCAACTTCACGCCGCA CTTGATGCCCATGTCACGCGGGATCCTCGAGTCCATCTACGTGAAAACCG CCCCAGGTAAGACAGCCGCAGATTTGAAGGCGCACTTGCAGGGTCTGTAC GCACAGGAGCCTTTTGTGCATGTACTGGAGGGCAGCAAGGTGCCCGAAAC CCGGCACGTGCGGGGAAGCAACCACTGCTTCATCAACGTCTTCGCGGACC GCGTCCCGGGGCGGGCCATCATCGTCAGCGCGATAGACAACTTGGTTAAG GTAAGAGGCGACTCGCGTGGGTGAAAGCTGCGATGGAGCTTACAGGCCTT TCGCGTCAATACTCTCCCTATTTTCAACGCTCAAAGTGGCGGACGTTTAG CCCCCTGTACGGCCCAGCGCGCTTCCTCCTCAGCAATTGAGCCCTCGAAT GTCAACACATTCACTCATACTTTGTGTCACTTCCCCAGGGGGCCTCAGGT CAGGCCGTCCAGAACTTCAATGTCATGTTTGGGTACCCGGAGACGACCGG TCTCCTCTCTCCGCCCATGTTCCCCTAGTGTCGACCCGACTTTCTCATGG TCACTGTCTCTCCCAAGCCCGGTGGCTCTAGCCCATCTTCGCCAACTCCA ACTATTATGTGGAGGCAGCGTACATGATAGCTGCTACTCGAAACGAGGGC TATCAGAGTCTTTCAAGTCAGAAAGGAAATGGAGCGCACAGAGGATTAAT CTACGCCAGATCGGCATTTTTGGTGCCTGTATCTCGGAAGAGCAAAGGAA GCAATTTGCCTCTATAGTTTAAGATGGACAAAATTTCAGTTACCTTCTGG GT
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Coding sequence (CDS) from alignment at CM002464.1:432785..435186-

>rna4814 ID=rna4814|Name=rna4814|organism=Nannochloropsis gaditana|type=CDS|length=4536bp|location=Sequence derived from alignment at CM002464.1:432785..435186- (Nannochloropsis gaditana)
GGGGCCTCAGGTCAGGCCGTCCAGAACTTCAATGTCATGTTTGGGTACCC
GGAGACGACCGGTCTCCTCTCTCCGCCCATGTTCCCCTAGAACATTCTCT
ACTGCGAAGTAACGGATGGGATCTCTGCCTACGGAATCGCTTCCCACCGA
CACGCTCCCGAGATCGAGCAGGGCCTCCGGGAGGCGGCAGGCGGCAAGGA
GGTGGTCATCAACTTCACGCCGCACTTGATGCCCATGTCACGCGGGATCC
TCGAGTCCATCTACGTGAAAACCGCCCCAGGTAAGACAGCCGCAGATTTG
AAGGCGCACTTGCAGGGTCTGTACGCACAGGAGCCTTTTGTGCATGTACT
GGAGGGCAGCAAGGTGCCCGAAACCCGGCACGTGCGGGGAAGCAACCACT
GCTTCATCAACGTCTTCGCGGACCGCGTCCCGGGGCGGGCCATCATCGTC
AGCGCGATAGACAACTTGGTTAAGGATCTCCCCAGGCTCAGCAAATTCGA
GGACATGTCTCCCGAGAAGTGGGGCCAGGAGGTCGATGTCATCTTCTGCT
GCCTCCCACACGCCACAACCCAGCTGGTGATCGCCTCGTTGCCGCCCAGC
GTTAAGGTGGTGGACCTATCCGCCGACTTCAGGCTCGCGGACATCGAGGT
GTACAAGGAGTGGTACGGGGGCGAGCACAAGGCCCCCGAGCTCCAGAAAG
AGGCCGTCTATGCCATCACAGAGTTTAGCCGAGATCAGGTAAAAGCTTGC
CGGCTGGTGGCCAATCCTGGCTGCTATCCTACCGCGGCCCAGCTCCCGCT
CGTGCCGCTCCTGCGGAGCGGCCTGGTCTCCCAGGAAGACATCATCATCG
ACGCCAAGTCAGGCACGACAGGCGCGGGGCGCTCCCTGAAGCAGATGCAG
ACGACCTGTGATCTCAACCCTCGACGAGGTCGTACAACGACCTTGTCCGC
CGCCAGAGGGGGGTCATCGGTGCCCAGCGCGAGGGTCGGCATTTTGGGTG
CTTCTGGGTACACGGGTGCGGAATTGATGCGCATCCTTCTGCAGCATCCA
TATGCCAAAATCAAATACCTTACGGCGGATCGCTCGGCAGGCCTGGCTTT
CAGCGAGGTCTTTCCGCAGTTCAGCTACGTGAAGGGGGCCTCAGGTCAGG
CCGTCCAGAACTTCAATGTCATGTTTGGGTACCCGGAGACGACCGGTCTC
CTCTCTCCGCCCATGTTCCCCTAGAACATTCTCTACTGCGAAGTAACGGA
TGGGATCTCTGCCTACGGAATCGCTTCCCACCGACACGCTCCCGAGATCG
AGCAGGGCCTCCGGGAGGCGGCAGGCGGCAAGGAGGTGGTCATCAACTTC
ACGCCGCACTTGATGCCCATGTCACGCGGGATCCTCGAGTCCATCTACGT
GAAAACCGCCCCAGGTAAGACAGCCGCAGATTTGAAGGCGCACTTGCAGG
GTCTGTACGCACAGGAGCCTTTTGTGCATGTACTGGAGGGCAGCAAGGTG
CCCGAAACCCGGCACGTGCGGGGAAGCAACCACTGCTTCATCAACGTCTT
CGCGGACCGCGTCCCGGGGCGGGCCATCATCGTCAGCGCGATAGACAACT
TGGTTAAGGATCTCCCCAGGCTCAGCAAATTCGAGGACATGTCTCCCGAG
AAGTGGGGCCAGGAGGTCGATGTCATCTTCTGCTGCCTCCCACACGCCAC
AACCCAGCTGGTGATCGCCTCGTTGCCGCCCAGCGTTAAGGTGGTGGACC
TATCCGCCGACTTCAGGCTCGCGGACATCGAGGTGTACAAGGAGTGGTAC
GGGGGCGAGCACAAGGCCCCCGAGCTCCAGAAAGAGGCCGTCTATGCCAT
CACAGAGTTTAGCCGAGATCAGGTAAAAGCTTGCCGGCTGGTGGCCAATC
CTGGCTGCTATCCTACCGCGGCCCAGCTCCCGCTCGTGCCGCTCCTGCGG
AGCGGCCTGGTCTCCCAGGAAGACATCATCATCGACGCCAAGTCAGGCAC
GACAGGCGCGGGGCGCTCCCTGAAGCAGATGCAGACGACCTGTGATCTCA
ACCCTCGACGAGGTCGTACAACGACCTTGTCCGCCGCCAGAGGGGGGTCA
TCGGTGCCCAGCGCGAGGGTCGGCATTTTGGGTGCTTCTGGGTACACGGG
TGCGGAATTGATGCGCATCCTTCTGCAGCATCCATATGCCAAAATCAAAT
ACCTTACGGCGGATCGCTCGGCAGGCCTGGCTTTCAGCGAGGTCTTTCCG
CAGTTCAGCTACGTGAAGGGGGCCTCAGGTCAGGCCGTCCAGAACTTCAA
TGTCATGTTTGGGTACCCGGAGACGACCGGTCTCCTCTCTCCGCCCATGT
TCCCCTAGAACATTCTCTACTGCGAAGTAACGGATGGGATCTCTGCCTAC
GGAATCGCTTCCCACCGACACGCTCCCGAGATCGAGCAGGGCCTCCGGGA
GGCGGCAGGCGGCAAGGAGGTGGTCATCAACTTCACGCCGCACTTGATGC
CCATGTCACGCGGGATCCTCGAGTCCATCTACGTGAAAACCGCCCCAGGT
AAGACAGCCGCAGATTTGAAGGCGCACTTGCAGGGTCTGTACGCACAGGA
GCCTTTTGTGCATGTACTGGAGGGCAGCAAGGTGCCCGAAACCCGGCACG
TGCGGGGAAGCAACCACTGCTTCATCAACGTCTTCGCGGACCGCGTCCCG
GGGCGGGCCATCATCGTCAGCGCGATAGACAACTTGGTTAAGGATCTCCC
CAGGCTCAGCAAATTCGAGGACATGTCTCCCGAGAAGTGGGGCCAGGAGG
TCGATGTCATCTTCTGCTGCCTCCCACACGCCACAACCCAGCTGGTGATC
GCCTCGTTGCCGCCCAGCGTTAAGGTGGTGGACCTATCCGCCGACTTCAG
GCTCGCGGACATCGAGGTGTACAAGGAGTGGTACGGGGGCGAGCACAAGG
CCCCCGAGCTCCAGAAAGAGGCCGTCTATGCCATCACAGAGTTTAGCCGA
GATCAGGTAAAAGCTTGCCGGCTGGTGGCCAATCCTGGCTGCTATCCTAC
CGCGGCCCAGCTCCCGCTCGTGCCGCTCCTGCGGAGCGGCCTGGTCTCCC
AGGAAGACATCATCATCGACGCCAAGTCAGGCACGACAGGCGCGGGGCGC
TCCCTGAAGCAGATGCAGACGACCTGTGATCTCAACCCTCGACGAGGTCG
TACAACGACCTTGTCCGCCGCCAGAGGGGGGTCATCGGTGCCCAGCGCGA
GGGTCGGCATTTTGGGTGCTTCTGGGTACACGGGTGCGGAATTGATGCGC
ATCCTTCTGCAGCATCCATATGCCAAAATCAAATACCTTACGGCGGATCG
CTCGGCAGGCCTGGCTTTCAGCGAGGTCTTTCCGCAGTTCAGCTACGTGA
AGGGGGCCTCAGGTCAGGCCGTCCAGAACTTCAATGTCATGTTTGGGTAC
CCGGAGACGACCGGTCTCCTCTCTCCGCCCATGTTCCCCTAGAACATTCT
CTACTGCGAAGTAACGGATGGGATCTCTGCCTACGGAATCGCTTCCCACC
GACACGCTCCCGAGATCGAGCAGGGCCTCCGGGAGGCGGCAGGCGGCAAG
GAGGTGGTCATCAACTTCACGCCGCACTTGATGCCCATGTCACGCGGGAT
CCTCGAGTCCATCTACGTGAAAACCGCCCCAGGTAAGACAGCCGCAGATT
TGAAGGCGCACTTGCAGGGTCTGTACGCACAGGAGCCTTTTGTGCATGTA
CTGGAGGGCAGCAAGGTGCCCGAAACCCGGCACGTGCGGGGAAGCAACCA
CTGCTTCATCAACGTCTTCGCGGACCGCGTCCCGGGGCGGGCCATCATCG
TCAGCGCGATAGACAACTTGGTTAAGGATCTCCCCAGGCTCAGCAAATTC
GAGGACATGTCTCCCGAGAAGTGGGGCCAGGAGGTCGATGTCATCTTCTG
CTGCCTCCCACACGCCACAACCCAGCTGGTGATCGCCTCGTTGCCGCCCA
GCGTTAAGGTGGTGGACCTATCCGCCGACTTCAGGCTCGCGGACATCGAG
GTGTACAAGGAGTGGTACGGGGGCGAGCACAAGGCCCCCGAGCTCCAGAA
AGAGGCCGTCTATGCCATCACAGAGTTTAGCCGAGATCAGGTAAAAGCTT
GCCGGCTGGTGGCCAATCCTGGCTGCTATCCTACCGCGGCCCAGCTCCCG
CTCGTGCCGCTCCTGCGGAGCGGCCTGGTCTCCCAGGAAGACATCATCAT
CGACGCCAAGTCAGGCACGACAGGCGCGGGGCGCTCCCTGAAGCAGATGC
AGACGACCTGTGATCTCAACCCTCGACGAGGTCGTACAACGACCTTGTCC
GCCGCCAGAGGGGGGTCATCGGTGCCCAGCGCGAGGGTCGGCATTTTGGG
TGCTTCTGGGTACACGGGTGCGGAATTGATGCGCATCCTTCTGCAGCATC
CATATGCCAAAATCAAATACCTTACGGCGGATCGCTCGGCAGGCCTGGCT
TTCAGCGAGGTCTTTCCGCAGTTCAGCTACGTGAAG
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Synonyms
Publications