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Properties
| Property Name | Value |
|---|
| Product | uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100054g24.5583.mrna |
| Orig protein id | gnl|cribi|Naga_100054g24.5583 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:431417..432796 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4813 ID=rna4813|Name=rna4813|organism=Nannochloropsis gaditana|type=mRNA|length=1305bp
ATGACTGCATGCGAAACGGCGTCCTCCTGGCCCTCGGAGGCTCAAGACAC
CAATATGGCTCAGTCTCAGTCGAGCAACACGTCTGGAGCCTTATCTCCGG
AGGCGGCAATGAGCCCTGTTCATGGTGTGGCAGGGAACAGGATATCGCAC
AGCGCCAGCACTGACAGTTTCTTCGGAGCTGACAAGGCGAGCACTCTCTC
GTCAGAACCTGAGCACTGCCGAGAGCTTCTGAACAACGCTAGTAACGACG
ACGCGGTCACCGTCTCTCCCAGCCATACCGCGTCGGCGGATAGGGGTTCC
GGCACGGGTGACGTGGAGGAGAAAGGCAGGTTGCTCGCAATGGAAGAATG
GGAGCAGGCCAGCAAAAATACGACCACTTGGGGCGTAGACATGGTGCTTC
AACGACACCAGCAGCAAATATTTGACAGCGATAGTATGGACACCCTGGGC
GTCATTCCTTTGTCATGCTCCCCCCCAAGCGGCGCCGGCTGCAAGCGTCC
GCGCAAAAAAATGACAAGGCCCGCCTCGGAGCCGGCGTTGTTGAACAACG
AGGCCTCCCCGCAGGACTTTTTGTGGGGCATTCTCCAAGAAAGGGGTTAC
GAAACATCCCCACTGCTCGCCAAGACACAGGCCTTCTTCCGCCCGCCCAC
CGCCAAGCAAGTGACGGACTACGACATCCCCCTTGTCACGGCGGTCAGGA
CGGGGGATCTGGGGAGCCTGCGGGATATGGCCGCGGCGGGGCGACAGATG
GACGCTTGCAATCGTTTTGGGGAGAGTATCGTGCACATATCCTGCCGGCG
CGGCCAGGCCGAGACTCTGCGGTTCCTCCTCGAGAACGGGGGCCGAGTCC
ACATGTGCGACGACCTGGGCCGCACTCCCTTGCACGACGCCTGCTGGGCC
AAGGTCCCAGTCTTCGACTGCGTGTCCGCCATAATGGACCAGGACCCTTC
ACTTATCCGCGTCGTGGACTGCCGGGGGGCTACGCCCTTGTCCTACATCC
GTCGGGAGCACTGGCCGGAATGGCGGGAGTTCTTTGACTCCAAGAAGGAG
AAATACTGGGCTCCACTGCCGGGCTGCGCCTCACATGCGCGGTCGGGGCG
ATCCGATTCCGAAAGTACCATCTCTGGAGGGGTGGAAAGGGAGCCACGCG
GACAGAAGGAGAATGTGGAGACTTTGCACTCCTCCTCCGCCGCCAGGCCC
GTGACGGCGACGGGTGGGTCGACTGATCGTGAAGGTGAGGAGGTGCAACA
GACGCGAACAAGCGAGCGACAACGGCAACGAAAACGATCTAAGAACGTGA
AATGA back to topprotein sequence of rna4813 >rna4813-protein ID=rna4813-protein|Name=rna4813|organism=Nannochloropsis gaditana|type=polypeptide|length=380bp
MSLAPWPKRRPDGSFEASKLPIFERSATFSGRKRARSASETEQQQYDSSC
PLQNDVSSEHLSDVVAAILLLIQRFYQGTSTNDSRRLKMENCPVVLQHQL
YTVLDDHTSVDVELEDLKTSNHVRLFRLLTLRRDIGVLLTSTYKARVQAA
FAAFAQQEGTRGRDENITESICNSVTEREEDGNDKRSRNSSVQASKLSAR
HMALVSDFFLKTVDRVTNIIMTQHQLESLWGEYTQSISHSQAPACPRSSM
SAGPGKRRAAPSLLPSIDEVTRVLIHYGFLARRVDAVYEGPAYWFSAPEL
GSVTASLPRGRKAILAALARSRYKELSEQNLGALRLKGTALSLSFHMADL
VGSGEVLAVPTASGMFLRLPARTASGATGR back to topmRNA from alignment at CM002464.1:431417..432796+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4813 ID=rna4813|Name=rna4813|organism=Nannochloropsis gaditana|type=mRNA|length=1380bp|location=Sequence derived from alignment at CM002464.1:431417..432796+ (Nannochloropsis gaditana)
TCAACCGTTACGCCGCCCCagcacgagaaacatcatGCGAGCGGCTCTAC
ATAGCCTTTGTATGTGCCGGCACTCTGGAAAAATCTTGTGTGGACTGATT
ACACTTTGATTCAATCATACGTGACAGGGTGATGTCGCTTGCGCCTTGGC
CCAAGCGGCGGCCTGATGGATCCTTTGAAGCCTCCAAACTACCGATCTTT
GAAAGGAGCGCGACTTTcagcgggaggaagcgtgCGAGGTCAGCAAGCGA
GACGGAGCAGCAACAATATGATAGCAGTTGCCCTCTTCAAAATGATGTGT
CATCGGAGCATCTTTCGGATGTAGTTGCTGCTATTTTGCTTTTAATCCAA
CGCTTCTACCAGGGAACTAGCACGAACGATTCTCGGAGGCTGAAAATGGA
AAACTGTCCTGTAGTCCTGCAACATCAGCTCTACACGGTCCTAGACGATC
ATACGTCCGTTGACGTCGAACTCGAGGACTTAAAGACGAGCAATCATGTG
CGCCTATTTCGTCTCCTTACTTTGCGGCGCGACATTGGTGTGCTCCTCAC
CTCCACTTACAAAGCTCGCGTTCAGGCCGCCTTTGCAGCGTTCGCTCAAC
AAGAGGGAACACGAGGACGGGATGAGAATATCACAGAATCAATATGCAAC
AGTGTGActgagagagaagaagatggaaaCGACAAGAGATCCAGAAACAG
CAGCGTGCAGGCCTCCAAGCTCTCGGCGCGACACATGGCCCTCGTCTCCG
ATTTCTTCCTGAAGACCGTGGACCGAGTCACGAATATAATTATGACACAA
CACCAGCTAGAGAGTCTGTGGGGAGAGTACACGCAGAGTATTTCCCACTC
CCAAGCGCCCGCTTGCCCTAGATCAAGCATGTCCGCCGGCCCTGGTAAAA
GGCgagctgctccttccctgcttccgAGCATCGATGAAGTCACACGCGTT
CTCATTCATTATGGTTTTCTCGCGCGGCGTGTCGATGCTGTGTACGAAGG
ACCTGCATATTGGTTCTCAGCCCCCGAACTCGGAAGTGTGaccgcctccc
tgcctcgcggCCGCAAGGCCATCCTGGCGGCCCTGGCACGGTCGCGGTAT
AAGGAACTTTCGGAGCAGAACTTGGGGGCTTTGCGGCTTAAGGGGACAGC
GCTCTCGCTCTCTTTTCATATGGCGGATCTGGttgggagtggggaggttt
tgGCCGTACCCACAGCCTCTGGAATGTTTTTAAGATTGCCCGCGCGAACG
GCGTCCGGCGCCACTGGAAGATGACGTGAAGGCCATTGATCCAAGAAACA
TGCCGGCGCAATTTTGAAAATTATCTTGTGAAAGAAAATCTAGTCAAATG
AATATCAAATTAGATAGTACCCAGAAGGTA back to topCoding sequence (CDS) from alignment at CM002464.1:431417..432796+ >rna4813 ID=rna4813|Name=rna4813|organism=Nannochloropsis gaditana|type=CDS|length=1143bp|location=Sequence derived from alignment at CM002464.1:431417..432796+ (Nannochloropsis gaditana)
ATGTCGCTTGCGCCTTGGCCCAAGCGGCGGCCTGATGGATCCTTTGAAGC
CTCCAAACTACCGATCTTTGAAAGGAGCGCGACTTTcagcgggaggaagc
gtgCGAGGTCAGCAAGCGAGACGGAGCAGCAACAATATGATAGCAGTTGC
CCTCTTCAAAATGATGTGTCATCGGAGCATCTTTCGGATGTAGTTGCTGC
TATTTTGCTTTTAATCCAACGCTTCTACCAGGGAACTAGCACGAACGATT
CTCGGAGGCTGAAAATGGAAAACTGTCCTGTAGTCCTGCAACATCAGCTC
TACACGGTCCTAGACGATCATACGTCCGTTGACGTCGAACTCGAGGACTT
AAAGACGAGCAATCATGTGCGCCTATTTCGTCTCCTTACTTTGCGGCGCG
ACATTGGTGTGCTCCTCACCTCCACTTACAAAGCTCGCGTTCAGGCCGCC
TTTGCAGCGTTCGCTCAACAAGAGGGAACACGAGGACGGGATGAGAATAT
CACAGAATCAATATGCAACAGTGTGActgagagagaagaagatggaaaCG
ACAAGAGATCCAGAAACAGCAGCGTGCAGGCCTCCAAGCTCTCGGCGCGA
CACATGGCCCTCGTCTCCGATTTCTTCCTGAAGACCGTGGACCGAGTCAC
GAATATAATTATGACACAACACCAGCTAGAGAGTCTGTGGGGAGAGTACA
CGCAGAGTATTTCCCACTCCCAAGCGCCCGCTTGCCCTAGATCAAGCATG
TCCGCCGGCCCTGGTAAAAGGCgagctgctccttccctgcttccgAGCAT
CGATGAAGTCACACGCGTTCTCATTCATTATGGTTTTCTCGCGCGGCGTG
TCGATGCTGTGTACGAAGGACCTGCATATTGGTTCTCAGCCCCCGAACTC
GGAAGTGTGaccgcctccctgcctcgcggCCGCAAGGCCATCCTGGCGGC
CCTGGCACGGTCGCGGTATAAGGAACTTTCGGAGCAGAACTTGGGGGCTT
TGCGGCTTAAGGGGACAGCGCTCTCGCTCTCTTTTCATATGGCGGATCTG
GttgggagtggggaggttttgGCCGTACCCACAGCCTCTGGAATGTTTTT
AAGATTGCCCGCGCGAACGGCGTCCGGCGCCACTGGAAGATGA back to top
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