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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100054g16.5559.mrna |
| Orig protein id | gnl|cribi|Naga_100054g16.5559 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:415989..416365 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4806 ID=rna4806|Name=rna4806|organism=Nannochloropsis gaditana|type=mRNA|length=2958bp
ATGGCCCGTCTCTGTAGCACGTCTGTTTCCGCAGTTCTACTGCTGCTGGT
TTCCAATTCCGGATGGACAGCAGGGAAAACTGAGCTTAGACAGACTTTCA
GCGGACTGGCGCAGGCCGCGGAATCCAACCCGGGAAACCAATTCGGGGGA
GCCTTTCTGAATGGCGCCAGCGCCATTGCCAAAGGTCTTGCGGGGAATGC
TGCAACAGACAACATCCCTTCCAGCACTTCTGCGGGTGCCACTGATATTA
TCAAAGATGACTTGGGGCCGGACGTACTTCCCACTCCACCCGAAAACAAC
AACGTGGCTAACAAGGCCTCTCTGGGCGGTCTTGTAGGAGGCCCGGGCAC
TTCCCTCGGGGACGGTCTCAGCTGGAACTTCGGGTCGAAGGGTATGATCC
AAATGCTAACGGGCTTTTTCATGACCTTCATGTCCGGTTCTGCTAACCCC
AACAGCGCCTTGAACGTGTATGGCAGCGCCCTTATGAGCCAGGACCCGGT
GGAGATCTCTGCTGCTTTTGGAAAGCTTCTGACGTCGTTGGATATGTCTT
GTGCCTTCCAGATGACAAGCGGTGGCGATGGCGTGGATATGAAGTTCCGT
GACGGGAAGGAGGCTTTGCACATCCAGTTTGTACCCACCACCAAAGCGAC
TGTCTTCAATTTCAAGGGCGAGTTCCCGAAATCTCGCGCCTTTTCTTACG
CAACTTACGCTGTGGCAAACCAGCAGGTGTCTTTTGTGGACATGATCTCC
GACGTTGACATGGTCGCCTCCACCGGCTCGAATCCTTTCACTGCGGGCCC
CGGCAATACAGGTGCCTCGGGCTCCTACGACTTGTACGTGACTCCCGATG
GCAAGCAGGGCTTTCCTAACGAGATCAAGACCTTCGCCGACGGCGATGTC
ACTAACGAGCTTTCCGGCATCATCATCGTCTACCGCGTCATCATGGCGGA
CGGAATCAAGTCAGATGGATGGGGCGGCGTTCCTCCCCCCGCCCTCCGCG
TTAAAGCCTTCAGTGTGCTGGCCACAGGGTTGTGGTTCAATCTGGCCCCC
TGCAACCCCAAGAACGATATCACAATCGAAAATTTCATTGAGAACAGATT
GGCCTTGAAGGAAGGCATGTCGGACGTCAAGGTCGAGTGTGACGTCTTCA
ACATGGACAACAATTTTGTCTACTACGACGACGCCCAGTACTTTAAGACC
CCCGACGAGAACCACATTATCTCCTGCGGCAACCGCGCTCTCCTACCCCC
CGGGGCCGACATGATCACCATCATCTCTGGAACCCTCCCCCCCGCTTCAG
ACTCCCGTTACGCCTCCATCAGCTTGGTCAACCTGTACCCTCCAGGGAGG
AACGTCTACTCCGTCTCGGACCAATCTTTGCGAAATTTTTACTGGGACCA
GGGCAAGTCGGCCGTGAACTACACCATCATCATGGCCAAGAACAAGCTTG
CTCTCAACAAGTGCGGCCTCAGCAAATTGCCCGCCAACTGGTATCAGGTG
TATTGGGCCGGCTTTGCGGATGCCCTCGAGGGTTCGTACCCGGGCATTGT
CTACCGCGAGATGATGACGGACGGCTACGAGCAGTCCTTGGAACAGGTTC
GGTATGCCTGTGAGGCAGAGAAGGACTGCTCCAACCCCAAATTCTTCGAG
CAGCAGATGGGCGATTACTACCCTCGCATTTCCTACCTGTCCTGCAGCAG
CTCAGGCCTGGCCCCGGCACCCATCAAGAACGAGAACTTGACGTTCCCCG
AGCCGCGACTGCCCCGACCGGCCTTTCAAGGCTTATGGACGAGTTTGGCG
GGCAATGACTTGTTGGGGGTGGAGTCGATTCCCCAGGCCTCGGTCACGAT
GGCGGCGCTCCAGGGCTCGGACGTCTACGTGAACGGGAAGCTCGCGGGGA
GGGCCACGGACAACGTGAAGGTGGTGAGCAAGCAGACGGCCTCCTTCGGC
TGGTCCCCGATCCAGTCCGTGTACTACGACCCCGAGAACCCCGTAACGGC
CAACCCGGTGATCAGGGAGTACATGGACGCGGACGGGAACCCCGTCCAGC
TCGAGCTGGTCCCCACCCCCGCCAAGTTCTTGCCGGACGAGGTGCTCTTC
GCCGTGAAGGTGCCCATCACGGGGGGGCTCAAGGCCTTCTTCGCCACCCA
CGACGTGTGCGGGACCAGCAGGTCGAGTGCGGCGGGGTGGAAGTGCATCG
CTACCACATTCCCGGACGCGAACTGGACCTTGCCGTCCTTCGACGACTCC
AAGTGGCTTCCGGCCAAGGCGCTGAAGAAGGGGGAGGCCTGCTCGGGCAT
GCCCACGGATTGCACTGCTCTTCCCCCCGACGCGCAGGGGATATGGGCCG
ACACCTGCACAGGAAGTGGGGGACCCAACCAGGGCAACGTCTACTGTCGC
TTGCGGGTGCCGCAGACCTGCGACTTGACAGCGAGGGCGGGTTCCGACGA
CAGGGTCAAAACCTGGTGCCCCGACCTGGCCAATGCGGTGGCGACGGCGC
GCTTCGCCTCCCCGACCCTGCATTGGCTTTACGCGAACGGGCTGGAGGTC
GGGGGCGACCAGACGATGGTGATCCCGGCGGGCACCACGAGCTTTGCCTT
GGACCCCGCCGCGCCCACCGTGGTCCTGGCTTTTAAGGCTGTGGATGACA
CGCGCAAGGTGGTGAAGAGCTTCATCAAGGGCCAGTTCAATCTGTGCGGG
TTCGAGCACGTGACGGACGCGTCGTGGAGGTGTGCACCCTCGGAGCCCTT
CACGGACGACTGGCTGCAGCCTGGCTTCGACGACTCGGAGTGGGACCCTG
TCCGCGTCGTCGACGGCTTCCCTTGGCAGCCCAACCCCTCGGCGGGCATG
AGCCCCGAGTCCTCCTGGGTCTGGGCTCAGAGCGGGATCCAGACCTTCTG
CCGGCTGGAGGTCCCGAACCCCGTGTACGGGGCCAAGCAGTTCTTTGAGA
TTGCATAG back to topprotein sequence of rna4806 >rna4806-protein ID=rna4806-protein|Name=rna4806|organism=Nannochloropsis gaditana|type=polypeptide|length=111bp
MRSVHDCGQRAVQVRHKHVGSCSPSREDRVERKGKLMRVCMDAKCWLSTY
AFILRQKALKNLKGREICGFFSFLVLFFGSSSAVGYAFTSLLRGVSPTLC
DQDVWGAARLT back to topmRNA from alignment at CM002464.1:415989..416365+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4806 ID=rna4806|Name=rna4806|organism=Nannochloropsis gaditana|type=mRNA|length=377bp|location=Sequence derived from alignment at CM002464.1:415989..416365+ (Nannochloropsis gaditana)
ATGCGATCGGTGCATGACTGCGGGCAGAGAGCGGTGAGGACTGGCAGTAC
TCTTGGGTacgagaggagagaaaggtgCAAGTCCGTCACAAGCATGTCGG
GAGCTGCAGCCCATCGAGGGAGGATAGGGTGGAACGTAAAGGAAAACTCA
TGAGGGTGTGCATGGATGCGAAGTGCTGGCTATCTACGTATGCTTTCATC
CTACGCCAAAAAGCACTGAAGAATCtaaaaggaagagaaatttgtggctt
tttttctttcctggTTCTTTTTTTCGGTTCAAGTTCTGCTGTAGGCTATG
CATTTACATCTCTTCTTAGAGGTGTTTCCCCGACGTTATGTGATCAGGAT
GTGTGGGGAGCGGCAAGGCTTACTTGA back to topCoding sequence (CDS) from alignment at CM002464.1:415989..416365+ >rna4806 ID=rna4806|Name=rna4806|organism=Nannochloropsis gaditana|type=CDS|length=672bp|location=Sequence derived from alignment at CM002464.1:415989..416365+ (Nannochloropsis gaditana)
ATGCGATCGGTGCATGACTGCGGGCAGAGAGCGgtgCAAGTCCGTCACAA
GCATGTCGGGAGCTGCAGCCCATCGAGGGAGGATAGGGTGGAACGTAAAG
GAAAACTCATGAGGGTGTGCATGGATGCGAAGTGCTGGCTATCTACGTAT
GCTTTCATCCTACGCCAAAAAGCACTGAAGAATCtaaaaggaagagaaat
ttgtggctttttttctttcctggTTCTTTTTTTCGGTTCAAGTTCTGCTG
TAGGCTATGCATTTACATCTCTTCTTAGAGGTGTTTCCCCGACGTTATGT
GATCAGGATGTGTGGGGAGCGGCAAGGCTTACTTGAATGCGATCGGTGCA
TGACTGCGGGCAGAGAGCGgtgCAAGTCCGTCACAAGCATGTCGGGAGCT
GCAGCCCATCGAGGGAGGATAGGGTGGAACGTAAAGGAAAACTCATGAGG
GTGTGCATGGATGCGAAGTGCTGGCTATCTACGTATGCTTTCATCCTACG
CCAAAAAGCACTGAAGAATCtaaaaggaagagaaatttgtggcttttttt
ctttcctggTTCTTTTTTTCGGTTCAAGTTCTGCTGTAGGCTATGCATTT
ACATCTCTTCTTAGAGGTGTTTCCCCGACGTTATGTGATCAGGATGTGTG
GGGAGCGGCAAGGCTTACTTGA back to top
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