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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100048g26.10283.mrna |
| Orig protein id | gnl|cribi|Naga_100048g26.10283 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:347809..349822 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4787 ID=rna4787|Name=rna4787|organism=Nannochloropsis gaditana|type=mRNA|length=2253bp
TACATCGCTTTGAACATGTCATGAGAGTAATTTTTCATGCCGGTCGCCCG
GTCGCCCAGCAAAGAATGTGTCTCTTACAAGGTTTGTTGAGGTGCCACAC
AATCCACATTTTACATTCAAATAAGGCTCGACAGGGAAAACGAAGGACGC
TTAAATTTGCCGGCCAACAAAAATTGAAACAACTGCAGGCCTCTGCCATG
AGCGACTGTGATGGCAAGATGACCGCCAGCCTCGACGACGTCCAATAGCC
CACTAGAATAGACTGCGAAATCCAAGACAAAATTTCGGTGATTAACGGAT
AGCAACGAATGGACATGTACCCCAGAAATCATTGGGATCTGAACTGTAAT
TATGGAGAAATAGGAGACGCTCAGGAGTTGACATTCACGCTCCAGGACAT
CCTTGCCCGTAATAAAGCCATTCTTCGTGAAGTCAACCGTGCTAAGGACC
TTGTTGATCAACACCGCTTTCACCAAAACAACGATATACAAACCAAGCCA
ATTAGCGCGAGAACCAGCCAAGAGCGACTCTTCCTGGCCAGACAGGATTT
TATGCAGGTCATCGAGAGTGTGACGCAACGGCAGAGAGAAGCAGATCTTT
TCCCCCAAAGAATGGTGATTATCCGGAGTGATGGCAGAAACAACCCACAG
CAGGCAAGAGCCAAGGGTACGGGTTCCGCAGACGCAAAAAAGCCCTTTCG
CGACCTTTTTAACAACGATGAAATTGTGCAGCACGAACAACTTTGGACAC
ATTTATCGCCCTTTACACCTCTCAAGAACATGCAAGGAACCCAGGAGATC
TGCCTCTCAGCTTTTGATTTGCCTGCGTCGATGCCCTCACCGGCCGAGAC
AAAAAAGTTTCCTGCCACACCGTCACCTCGTCGTCCTGATGCAAGGATGG
ATGCTATCAGCGTACCGCATGCTCTAGAAAAACAACACAAGGACTCGATG
ACCGCGGACTCCCCTGATCACTCGAAGAACTACAATGGAGTGGGGGTGCG
GGAGGTAGATGGTACGAATTACCCCGATATCCGCAACATGACTGCCGAGG
AACGCTTTACTGTAGCGGTTAATTTAATTCGACTGATCGAAAACCTATCT
TATGCGGTAGCTTCCTCGACGCGTGCGGCTCTGCCACGTTCCGGGTACCC
TGCTGTGTGGGACGGACGCATTCCCTCAAGAGTTCTGAAGTTCGAGCAGC
GTATGTACCAAGACCTGAAATCAAATGTCTTACAAGAAAATTGTTCCTCT
ATCTTGCAATCGAGGTCGCCCGGAGGAGCCTCCGAAAGCTTCGTTACTAC
GTGCTGTTTGGCATTTCTCCATCTTCTCCGCTTTTCTTCCCGGGAACTGC
TTCCGTTGCATCTGCTCGAAGAAGCGGTGGAGGAAGCGAAGCTATCCAAG
CACCACCGACACGTGCGACATGCAGCGGGCTTGTGGATGGCGTTCCAAGA
CCATCTGCGATTTTTGCTTTACCAGGAATCAATGACCCCGGAAGAAATTC
GGGATATTTTCGCCGAGGCATTACTTGGAGACATGAGTAAGAGAGGCAAA
GGAGAGGTCCTCCGAATACGGCGAAAGATAATGTTGCTTTTGGAGTCCAT
TATTCAAGGACTCGCGGCCAAAAAAGACAATCATCCTAGACATCAAGTGC
AGACTGAAACTCAAAAGGAGACGACTGTCGAGAAGTGCGGAACTTCAGTG
TGTGCCGGTCGTTTTCGAGGGGTAAGACCGATGTCGAAACCACTTTTGGA
TGAGAAATCCTATGAATTCCCCGGGGACACCGTGTCAGCAGGCATTTTTC
CGAACGTCACCTCAAGCGCTACTCGTCACTTGCCCACATGCTCCACTTCT
CACGGCAAGAGGAATTTCATTAGTCGTTTATTGCGGTGGAAGTAAAAATT
AGAGAACGCCACAAGTGATGCTGTTAAGAACAAAAGGCGCATCCGAAGAT
GTTCGCGAAAGTTCTGTTTGAGACATTTATCAAAATTCCTTCCTCTTTCG
GATACATTTGTAAGCGCGTGCGTGCTATTCGTTCCCACGACAGTGTACGT
TGGTTACAGAAGCACGTGCCTTTTCCCACTGAGATCGTCAAGTACAGTAT
CCTCCCCGACTTCCTGGTAACCATCTTGATCATCGATTTCCAAAGCTGTA
ATTCTCGAAAAGACTTGTTCGACTTTCCCCTGCGATCTTATCTTTCCGGC
CTGTATATCTTCTTAATCCTCCTCCAGCCCATCCGAACACACGTCGCCAC
TTT back to topprotein sequence of rna4787 >rna4787-protein ID=rna4787-protein|Name=rna4787|organism=Nannochloropsis gaditana|type=polypeptide|length=393bp
MLTAIGAVAVSPAEAGKLIATGLAFGCIHVLSGADHLSALATLAVGSRFK
AFGLGIRWGLGHSSGLILVALIILGLGDKIDPKVLEHTCSWIVGVFMIAL
GVWGIYKARRNEAIRNAAATMEGKETRGRSSLRGVEGMEEGRDPASEYGN
AQDTSDGTHALAQSESPPTTHCVPASSTSSSSTAREEDEEGGLELVPTSQ
AKREGSRSEGGDGKEDCGGSRRVNDETDAIDCAHEEQPCGMQEQDASEKS
PERDMSASEPFLEEDQGRRRQSLPKRCLACLRVDLESPTVQRVVAFGVGI
VHGIAGPGGVLGVLPAARLHSWPKATIYLATFCLSSTLIMGIFAALYGEC
TSRLGAARNIEFRLEIFSASLSLIVGVLWMSLILAGKLDSVFP back to topmRNA from alignment at CM002464.1:347809..349822- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4787 ID=rna4787|Name=rna4787|organism=Nannochloropsis gaditana|type=mRNA|length=2014bp|location=Sequence derived from alignment at CM002464.1:347809..349822- (Nannochloropsis gaditana)
TAAGCACAGTTTCGGAGGCGCTTGGTTGGAAGGCCTCACTGCTAGAGCTG
CCTTGAAGACTGGAAGTGCCTGTTGACGCCTTTATTGCAATAATTCGCGA
ACCAGTGGTGGGGAGGAGAGGTCACAAACCAAGCGAAGCTAAGCATTGCA
TCCAATGTTGACGGCCATAGGAGCGGTAGCTGTTTCTCCCGCGGAAGCAG
GCAAGCTAATCGCAACAGGTACGTTGTGCCTTGGTATTTGTCCTGATGGC
AGCGGATAGCTCCCTCTAAGCCTGTGCATCTTCTTTCTATCGTCTTTCCT
AGGTCTTGCCTTCGGTTGCATCCATGTTTTATCTGGTGCAGATCATCTTT
CAGCCTTGGCCACGCTTGCTGTTGGCTCCCGTTTTAAAGCCTTCGGCCTT
GGAATCAGGTACGTCACCCATCCCCGCGGAATTAGGACCTTCCGCCCGTG
TGGCGTGGGGGATGCTTCTTATTAAGGACGAAATGCAGAAGATGTGTCGC
CTAATCGTGTAATTCCTTGTCTCTCCGTCTTGGACAGGTGGGGCCTGGGC
CACTCCTCCGGACTGATCCTTGTCGCGCTAATCATTCTGGGACTCGGCGA
CAAGATCGACCCCAAAGTGCTGGAGCATACATGCAGCTGGATAGTGGGCG
TCTTCATGATTGCCCTGGGAGTATGGGGTATCTACAAAGCACGCAGAAAT
GAGGCGATCCGTAATGCAGCAGCCACGATGGAAGGAAAAGAAACCAGGGG
GAGAAGTAGCCTGCGGGGCGTGGAGGGAATGGAAGAAGGGAGGGATCCGG
CCTCCGAGTACGGGAACGCCCAAGACACAAGCGACGGCACACATGCCCTT
GCTCAGTCTGAGTCCCCGCCCACTACCCACTGCGTTCCGGCGTCTTCCAC
AAGCTCCTCGTCCACCGCGAGGGAGGAGGACGAGGAAGGGGGGCTGGAAC
TGGTGCCGACCAGCCAAGCGAAGAGAGAAGGCTCGAGGAGCGAGGGGGGA
GACGGGAAGGAGGATTGCGGGGGATCTAGACGTGTCAATGATGAAACGGA
CGCCATCGACTGTGCACACGAGGAGCAGCCATGCGGAATGCAGGAGCAAG
ACGCAAGTGAGAAGTCCCCTGAGCGAGACATGTCGGCAAGCGAGCCTTTC
TTGGAGGAGGACCAGGGTCGGCGGCGCCAGTCGCTGCCAAAACGATGCCT
TGCCTGCCTGCGTGTTGACCTGGAGTCTCCGACTGTCCAGCGCGTTGTTG
CTTTCGGAGTAGGCATCGTCCACGGGATCGCGGGACCCGGCGGGGTCTTA
GGCGTCCTTCCCGCTGCGCGGCTCCATTCCTGGCCCAAAGCCACCATTTA
TCTAGCTACTTTCTGCTTGTCTTCGACGCTCATCATGGGCATTTTTGCCG
CATTGTACGGCGAGTGCACGTCCCGGCTGGGCGCGGCCAGGAATATCGAG
TTCCGGCTAGAGATATTCAGTGCCTCCCTTTCGCTCATCGTAGGCGTGCT
CTGGATGTCTTTAATCCTGGCGGGAAAATTAGACTCTGTCTTTCCCTAAA
TTGAGGAGAGTGAGGCTGCTGGGAATGTACAAAGCGCATTGCGAGTCCGC
ACGAAGGCGTTACCATGGACATAAAAATACAAAAAGTGGCGACGTGTGTT
CGGATGGGCTGGAGGAGGATTAAGAAGATATACAGGCCGGAAAGATAAGA
TCGCAGGGGAAAGTCGAACAAGTCTTTTCGAGAATTACAGCTTTGGAAAT
CGATGATCAAGATGGTTACCAGGAAGTCGGGGAGGATACTGTACTTGACG
ATCTCAGTGGGAAAAGGCACGTGCTTCTGTAACCAACGTACACTGTCGTG
GGAACGAATAGCACGCACGCGCTTACAAATGTATCCGAAAGAGGAAGGAA
TTTTGATAAATGTCTCAAACAGAACTTTCGCGAACATCTTCGGATGCGCC
TTTTGTTCTTAACAGCATCACTTGTGGCGTTCTCTAATTTTTACTTCCAC
CGCAATAAACGACT back to topCoding sequence (CDS) from alignment at CM002464.1:347809..349822- >rna4787 ID=rna4787|Name=rna4787|organism=Nannochloropsis gaditana|type=CDS|length=3546bp|location=Sequence derived from alignment at CM002464.1:347809..349822- (Nannochloropsis gaditana)
GTGGGGCCTGGGCCACTCCTCCGGACTGATCCTTGTCGCGCTAATCATTC
TGGGACTCGGCGACAAGATCGACCCCAAAGTGCTGGAGCATACATGCAGC
TGGATAGTGGGCGTCTTCATGATTGCCCTGGGAGTATGGGGTATCTACAA
AGCACGCAGAAATGAGGCGATCCGTAATGCAGCAGCCACGATGGAAGGAA
AAGAAACCAGGGGGAGAAGTAGCCTGCGGGGCGTGGAGGGAATGGAAGAA
GGGAGGGATCCGGCCTCCGAGTACGGGAACGCCCAAGACACAAGCGACGG
CACACATGCCCTTGCTCAGTCTGAGTCCCCGCCCACTACCCACTGCGTTC
CGGCGTCTTCCACAAGCTCCTCGTCCACCGCGAGGGAGGAGGACGAGGAA
GGGGGGCTGGAACTGGTGCCGACCAGCCAAGCGAAGAGAGAAGGCTCGAG
GAGCGAGGGGGGAGACGGGAAGGAGGATTGCGGGGGATCTAGACGTGTCA
ATGATGAAACGGACGCCATCGACTGTGCACACGAGGAGCAGCCATGCGGA
ATGCAGGAGCAAGACGCAAGTGAGAAGTCCCCTGAGCGAGACATGTCGGC
AAGCGAGCCTTTCTTGGAGGAGGACCAGGGTCGGCGGCGCCAGTCGCTGC
CAAAACGATGCCTTGCCTGCCTGCGTGTTGACCTGGAGTCTCCGACTGTC
CAGCGCGTTGTTGCTTTCGGAGTAGGCATCGTCCACGGGATCGCGGGACC
CGGCGGGGTCTTAGGCGTCCTTCCCGCTGCGCGGCTCCATTCCTGGCCCA
AAGCCACCATTTATCTAGCTACTTTCTGCTTGTCTTCGACGCTCATCATG
GGCATTTTTGCCGCATTGTACGGCGAGTGCACGTCCCGGCTGGGCGCGGC
CAGGAATATCGAGTTCCGGCTAGAGATATTCAGTGCCTCCCTTTCGCTCA
TCGTAGGCGTGCTCTGGATGTCTTTAATCCTGGCGGGAAAATTAGACTCT
GTCTTTCCCTAAGTCTTGCCTTCGGTTGCATCCATGTTTTATCTGGTGCA
GATCATCTTTCAGCCTTGGCCACGCTTGCTGTTGGCTCCCGTTTTAAAGC
CTTCGGCCTTGGAATCAGATGTTGACGGCCATAGGAGCGGTAGCTGTTTC
TCCCGCGGAAGCAGGCAAGCTAATCGCAACAGGTGGGGCCTGGGCCACTC
CTCCGGACTGATCCTTGTCGCGCTAATCATTCTGGGACTCGGCGACAAGA
TCGACCCCAAAGTGCTGGAGCATACATGCAGCTGGATAGTGGGCGTCTTC
ATGATTGCCCTGGGAGTATGGGGTATCTACAAAGCACGCAGAAATGAGGC
GATCCGTAATGCAGCAGCCACGATGGAAGGAAAAGAAACCAGGGGGAGAA
GTAGCCTGCGGGGCGTGGAGGGAATGGAAGAAGGGAGGGATCCGGCCTCC
GAGTACGGGAACGCCCAAGACACAAGCGACGGCACACATGCCCTTGCTCA
GTCTGAGTCCCCGCCCACTACCCACTGCGTTCCGGCGTCTTCCACAAGCT
CCTCGTCCACCGCGAGGGAGGAGGACGAGGAAGGGGGGCTGGAACTGGTG
CCGACCAGCCAAGCGAAGAGAGAAGGCTCGAGGAGCGAGGGGGGAGACGG
GAAGGAGGATTGCGGGGGATCTAGACGTGTCAATGATGAAACGGACGCCA
TCGACTGTGCACACGAGGAGCAGCCATGCGGAATGCAGGAGCAAGACGCA
AGTGAGAAGTCCCCTGAGCGAGACATGTCGGCAAGCGAGCCTTTCTTGGA
GGAGGACCAGGGTCGGCGGCGCCAGTCGCTGCCAAAACGATGCCTTGCCT
GCCTGCGTGTTGACCTGGAGTCTCCGACTGTCCAGCGCGTTGTTGCTTTC
GGAGTAGGCATCGTCCACGGGATCGCGGGACCCGGCGGGGTCTTAGGCGT
CCTTCCCGCTGCGCGGCTCCATTCCTGGCCCAAAGCCACCATTTATCTAG
CTACTTTCTGCTTGTCTTCGACGCTCATCATGGGCATTTTTGCCGCATTG
TACGGCGAGTGCACGTCCCGGCTGGGCGCGGCCAGGAATATCGAGTTCCG
GCTAGAGATATTCAGTGCCTCCCTTTCGCTCATCGTAGGCGTGCTCTGGA
TGTCTTTAATCCTGGCGGGAAAATTAGACTCTGTCTTTCCCTAAGTCTTG
CCTTCGGTTGCATCCATGTTTTATCTGGTGCAGATCATCTTTCAGCCTTG
GCCACGCTTGCTGTTGGCTCCCGTTTTAAAGCCTTCGGCCTTGGAATCAG
ATGTTGACGGCCATAGGAGCGGTAGCTGTTTCTCCCGCGGAAGCAGGCAA
GCTAATCGCAACAGGTGGGGCCTGGGCCACTCCTCCGGACTGATCCTTGT
CGCGCTAATCATTCTGGGACTCGGCGACAAGATCGACCCCAAAGTGCTGG
AGCATACATGCAGCTGGATAGTGGGCGTCTTCATGATTGCCCTGGGAGTA
TGGGGTATCTACAAAGCACGCAGAAATGAGGCGATCCGTAATGCAGCAGC
CACGATGGAAGGAAAAGAAACCAGGGGGAGAAGTAGCCTGCGGGGCGTGG
AGGGAATGGAAGAAGGGAGGGATCCGGCCTCCGAGTACGGGAACGCCCAA
GACACAAGCGACGGCACACATGCCCTTGCTCAGTCTGAGTCCCCGCCCAC
TACCCACTGCGTTCCGGCGTCTTCCACAAGCTCCTCGTCCACCGCGAGGG
AGGAGGACGAGGAAGGGGGGCTGGAACTGGTGCCGACCAGCCAAGCGAAG
AGAGAAGGCTCGAGGAGCGAGGGGGGAGACGGGAAGGAGGATTGCGGGGG
ATCTAGACGTGTCAATGATGAAACGGACGCCATCGACTGTGCACACGAGG
AGCAGCCATGCGGAATGCAGGAGCAAGACGCAAGTGAGAAGTCCCCTGAG
CGAGACATGTCGGCAAGCGAGCCTTTCTTGGAGGAGGACCAGGGTCGGCG
GCGCCAGTCGCTGCCAAAACGATGCCTTGCCTGCCTGCGTGTTGACCTGG
AGTCTCCGACTGTCCAGCGCGTTGTTGCTTTCGGAGTAGGCATCGTCCAC
GGGATCGCGGGACCCGGCGGGGTCTTAGGCGTCCTTCCCGCTGCGCGGCT
CCATTCCTGGCCCAAAGCCACCATTTATCTAGCTACTTTCTGCTTGTCTT
CGACGCTCATCATGGGCATTTTTGCCGCATTGTACGGCGAGTGCACGTCC
CGGCTGGGCGCGGCCAGGAATATCGAGTTCCGGCTAGAGATATTCAGTGC
CTCCCTTTCGCTCATCGTAGGCGTGCTCTGGATGTCTTTAATCCTGGCGG
GAAAATTAGACTCTGTCTTTCCCTAAGTCTTGCCTTCGGTTGCATCCATG
TTTTATCTGGTGCAGATCATCTTTCAGCCTTGGCCACGCTTGCTGTTGGC
TCCCGTTTTAAAGCCTTCGGCCTTGGAATCAGATGTTGACGGCCATAGGA
GCGGTAGCTGTTTCTCCCGCGGAAGCAGGCAAGCTAATCGCAACAG back to top
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