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Properties
| Property Name | Value |
|---|
| Product | glycosyl family 43 |
| Orig transcript id | gnl|cribi|Naga_100134g13.9883.mrna |
| Orig protein id | gnl|cribi|Naga_100134g13.9883 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:271984..273928 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4760 ID=rna4760|Name=rna4760|organism=Nannochloropsis gaditana|type=mRNA|length=2704bp
GTGGCGTCGCAGGTCCAGGTCGACGCAGCTGTGGTTGTGGAGTCGGGAGA
AGACCACCTTGAGGGACTTTGGCTCTGTCTCCGCCAGTCTAGTGATCGTA
GTGTTGTCCTTGGCGGCGGCGGTGGTGGTCCGTACTATCGTCATGTCTAT
GGCGGAGGGGCACGACGTTGGCCGGTAGTGTCGGCTCTTCTTCTTTCCCC
GCCTGCCGTGGATGGTGTGACCCTCCGGTGCAACGACCCGAGGGCTTCAC
TTTTGGCCCACGCTGGAGAGCTCACACGCGATTACCCGGCGGCCATTGGT
GTGGTTAGTGAAGATGGCCACCATGACGTCGTCCAACGCCCTCTGCAACG
CCAGACTCAGGGAGGCATCTGCTGCCGCCACGCCCTTCTGAGGGAAGACG
TGGCCCTTATGGAGGCCCGGGTATATGAGATGCACCTTCGCCGTCGCCTG
CGTTCCCGTCTTGGTCTGGATGCGCAGCGTCGCAATCGCGGCAGTCGTGC
TGCTGCTAAATGCAGTTACGATGTCATTTTCGGTATATTACATTGCACTT
GTTACGTGGAAGGGAAGATAATGACCTACAAATTAATGCCAGCGTCCGCC
GTCGTGATGGCCATCAATAAGTTTCAAACGCGCACAGTCGTAGCTCAAGA
TCGCATCAAGATGGCATGCGCGGAAAAGGCTTCGCGCCTTTATGCGCCTC
AAGATACAAGATTGGTGCGAGAATCAGAGGATATCAGTATCAAGCAAGGA
AAACACAATATAAAAGCAACTTCTGCGACTGCGAGGCAAAGCACAATGTA
AACACATTCACGAAGGTGGCAACTTCGGCTGTCAAACGTCCAAGACGGAG
GATGTCAACATGAGGCGACCCGGATGTGTGGGGCGATAAAAAAGAAGGTA
GCCTAAGAAGGTGTGACCGGTTAACGGCTAGCATATCTTTGTGGGAGGTC
AAAAAATTAAGGCAAGGGGAAGCGGAGGATTTCCGAGCATAACTTCTCTT
TCGTTGCCAGAATCAGGTGAGGGACATAAAGTGCCCTCAGCTCTGCATGT
GGTGTTCTCAGCGCGCTGCAGCTTTTTGATTGTGAGTCCAGGCACGTTAC
CAACAGCAGGGCAACATAGCCATGTCAAGCAGCAGGGAAAGTGTGTTGTG
CGACAGTCAACAAGCTCCTGTAGAAGTGCGCTCGACCTGGAGCAAAGGGC
TATTATGGTCAATCACCTGCTGTGCTGTGCTTGTCATAGCTTTCATTTTG
GCTGCGTTCAGTGAAACCGGCAGAACACGAGCGTCCCGCTGGTACGGCAC
AATTATTTTCAAGATCAAACCACCTATGGTTCCAGTGGCTCCTTTCCTCT
TGACTGATCGGAAGTCATTCGAGTCGGAGGAGCTCCACTATTTGTGGAAA
GTCGAGAACCAACGTGAAATTGCAGCTACTACAGAAGCGAATGGGGCGAG
AAACGTAACGGGCCCTGGAGCAGGTGTAGCCGCTTGCACACTGGTCGTTG
ACGGGTATGACATGCAATCATTTGAAGACCGGACAGCAGCGCTTTCCTGC
TTGCGTAACAAGAGCATTGTTATGGTGGGGGACAGTCTGACCAGATATCA
ATACCTAAACCTTGTCAACTTCTTGGAAAATGGCGTATGGGGTGGACCGG
ACCCGCAGCTGGAGAACGAGTTTCAGTGGAAGGGGTGGCTGCCATTCTAC
CAGGGCACCAACGCACGCTTTAATGGAAGGGAGATCTGTGATTGTTACCG
TGAGGAACCTGCGGAACGCCGAGGGAACATCGAAAATCGATACTATCACA
ACGAAGTACTGGACGTCTGGGTCACTTTCTTTCAATGGTTCAACCCCGCA
TGTGGGCATCAGGGTCACAACCTTACCTGGCTGAACGTCTCCGTGCCTCC
GCCTCGGCTAGATCGGGCTCCGAAACGTTATGGCCAGACACCCGACGTGG
ACGAGTGGAGGAACTTGTATCGGGAAGGGCGGCATTTCCAAGAGAAGACG
TCGATGCGGTCTGATGCTTCGGCCATGCCCCTGACTTCCACGCTGCATCT
TCTTGAAGAAAAAGAGGCTTCTTCGATTCCATCTCGGCAAAGAGGCTGCG
AGCCAGGGGCCTGTGACCAAGAGCCGCATTGGGTGTACGACGTGTACGGG
CTTTTCACCAATGTCGTGCCGCTCCTCAACCCCGACGTCCTCGTCTTTAA
CAGCGGGCACTGGGGCCGCCTGCCCGGGGCATACGACCTGGAGCAACTGG
CTCAGTCCGCGATAGAAGCAGTCCGAGTATCGAATGGTCGGGTCGTGTAC
AAGACAACGACATGGCCGAGGATTAATGACCCCTTCGCTCCTGAAGACGA
TTTGAAGGATTTCTTTCAACGCCAAGGTATCAGCATTCTGGATGCAGGGG
CTATCACATATCCTGTCGCGGCCCTCGACAACCAACTGGTGAGCACACAA
AGCACACATTTGTTCTGGGACGGGCTTCACTTCTATGCACCCGTATATGA
AGGCCTGAACAAAGTACTTCTGAACTACCTTTGTCCGTCCTGAAGACACG
CGAATAGTACAGCGTTTGCGGCAACTAGCATAAATAAACAAAATGATCTA
AAAGTAAAGAGCAAGTGGCATTGATTTGCCGCAAGGCATATCACATGTTT
TCTTCCGTGCTGTACTTCATATTTGTTCAGCTTTACGATCCGCCTTCACG
CTGG back to topprotein sequence of rna4760 >rna4760-protein ID=rna4760-protein|Name=rna4760|organism=Nannochloropsis gaditana|type=polypeptide|length=398bp
MGYFFSVGGCILSLLLPLPTATAKFVLFDNTKPAFDTEGRILDAHDGTIQ
RFHKDGPYYMHAVEYGLCQAPNITGCDSPDRCGFRLDHNLSVYTSWDLSS
GSWAFQGYAFPWTERPAGTLFRPSAVFNPTTHEYILWWNYVYPNGTYAGF
AVATSSKPQGPFEQRRAQVNIAHLPAGDFHLFVDDDGTGYVLYSADFWIT
IEELTPDFLGVSGRAFDGFRGNGSEWGFEAPVMFKRKGIYYILFGPMCCF
CYQGSGIRVYTATSPLGPYTFQGDDIACASKGTFAATAHTRADNDGPIPT
PEQGCLFYGTDQISTTRAQQNFVIEVQTSGGETEYVWTGDRWMQSPDGLK
GHEPQYWFPLSFDEQGRIERVSWIDLFVLDVADMTEEDEALPLRVSQS back to topmRNA from alignment at CM002464.1:271984..273928+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4760 ID=rna4760|Name=rna4760|organism=Nannochloropsis gaditana|type=mRNA|length=1945bp|location=Sequence derived from alignment at CM002464.1:271984..273928+ (Nannochloropsis gaditana)
CATGATTCATAGTCGGGTTGACCAAAATTGCGGCCATCATTCGTTATCTC
ATATGTCCGTCGTGCTTGGACGCACTGCCATTTTTGGGAAAAGGTATGAG
CGCTTGAAGCGAAAGCAGCGACAGACGGCGCTAACGTGATACTGCCCTAC
GCATGTGAGCATTTTCTTCACGGCATGAGTTGCGTTCGACAAAGGAAATT
GACGTAGGACTGGAACAATTTTTATTGCCTCAAGATGGCGTTTGGTGACA
AAGAAACGAGCGTCTCTTTGTTAATTAAACCGTAAAAGCAGTACTGTAAT
GGAGCACTTGGCTGTGCTTCAGGTGCTCGCgtcttgttgctgttgcctGC
CTGCGACCTGGATATAGATGGTAACAGTTTGGCACAATATGAATACAACA
CACAAACATACAAGGTTCAAATCTGTTTAGTGGACACGTCATGGGATACT
TTTTTTCAGTCGGAGGATGTATTCTCAGCTTGTTGCTGCCTCTGCCTACG
GCCACAGCAAAGTTCGTCCTTTTTGACAACACAAAGCCTGCCTTCGACAC
CGAGGGTCGAATCTTGGACGCTCATGATGGAACCATTCAACGCTTTCATA
AAGATGGGCCGTATTATATGCATGCCGTAGAGTACGGCCTTTGTCAGGTG
AGAGTTGTGGAGGAGTTCTTCTTGAGGAGTGGCAATACGGGAGGTTTGGG
TAGGAACCCCCCTCTCAATTATTGACACCGCCCGCGTGCACGGACGTCGT
TTTCAGGCACCAAACATCACAGGTTGCGACTCCCCTGACCGGTGTGGCTT
TCGCTTGGACCACAATCTCAGTGTGTACACGAGTTGGGACTTGAGTAGTG
GCTCCTGGGCGTTCCAAGGATACGCCTTCCCTTGGACAGAACGGCCCGCG
GGCACCTTGTTCCGGCCTTCCGCTGTCTTCAACCCCACCACTCACGAGTA
CATTTTGTGGTGGAATTATGTCTATCCTAATGGCACGTACGCAGGTTTTG
CAGTGGCTACCTCCTCAAAGCCACAGGGACCCTTTGAACAGCGTCGGGCC
CAGGTCAATATTGCGCACCTTCCTGCCGGTGATTTTCATCTCTTTGTCGA
TGACGACGGGACAGGCTACGTACTATATTCCGCGGACTTTTGGATTACCA
TAGAAGAATTGACGCCCGATTTCTTGGGGGTCTCGGGGCGCGCGTTTGAT
GGATTCCGAGGGAACGGATCCGAGTGGGGCTTCGAGGCGCCCGTCATGTT
CAAACGCAAGGGCATCTACTACATCCTGTTCGGGCCCATGTGCTGCTTCT
GTTATCAGGGATCTGGCATTCGTGTCTACACTGccacttcccccctcggT
CCCTACACTTTTCAAGGGGACGACATTGCCTGTGCTTCCAAAGGCACCTT
TGCCGCGACTGCTCACACCCGCGCCGACAATGACGGGCCCATTCCCACTC
CAGAGCAAGGTTGCTTATTCTACGGCACGGACCAAATATCCACGACGCGC
GCTCAACAGAATTTCGTAATAGAGGTGCAGACGTCTGGGGGAGAAACGGA
GTATGTGTGGACAGGGGACAGGTGGATGCAGTCCCCGGACGGGCTGAAAG
GGCACGAGCCGCAGTATTGGTTCCCCTTGAGCTTCGACGAACAGGGACGC
ATCGAGAGGGTGTCGTGGATCGATCTCTTTGTTCTGGATGTGGCAGACAt
gaccgaggaggatgaggctCTGCCGTTGCGTGTGAGCCAAAGTTGAAGTT
GAGGGGGGACAGAGACGGAAGCGATTTTGTATAAAAAGAGTGGCACAGGC
ACGCTACAAATTGTTGATATGAAGGCCTGCGGGATTATCCACAGGTGAGC
TTATGGCGATGTTCAGGCACGATATTCCGATATTCCAAAAAGCATAAATA
AAAGTACCTTTTCCGACGTGAGCAAAATACAATCCACTGTGTACA back to topCoding sequence (CDS) from alignment at CM002464.1:271984..273928+ >rna4760 ID=rna4760|Name=rna4760|organism=Nannochloropsis gaditana|type=CDS|length=2394bp|location=Sequence derived from alignment at CM002464.1:271984..273928+ (Nannochloropsis gaditana)
ATGGGATACTTTTTTTCAGTCGGAGGATGTATTCTCAGCTTGTTGCTGCC
TCTGCCTACGGCCACAGCAAAGTTCGTCCTTTTTGACAACACAAAGCCTG
CCTTCGACACCGAGGGTCGAATCTTGGACGCTCATGATGGAACCATTCAA
CGCTTTCATAAAGATGGGCCGTATTATATGCATGCCGTAGAGTACGGCCT
TTGTCAGGCACCAAACATCACAGGTTGCGACTCCCCTGACCGGTGTGGCT
TTCGCTTGGACCACAATCTCAGTGTGTACACGAGTTGGGACTTGAGTAGT
GGCTCCTGGGCGTTCCAAGGATACGCCTTCCCTTGGACAGAACGGCCCGC
GGGCACCTTGTTCCGGCCTTCCGCTGTCTTCAACCCCACCACTCACGAGT
ACATTTTGTGGTGGAATTATGTCTATCCTAATGGCACGTACGCAGGTTTT
GCAGTGGCTACCTCCTCAAAGCCACAGGGACCCTTTGAACAGCGTCGGGC
CCAGGTCAATATTGCGCACCTTCCTGCCGGTGATTTTCATCTCTTTGTCG
ATGACGACGGGACAGGCTACGTACTATATTCCGCGGACTTTTGGATTACC
ATAGAAGAATTGACGCCCGATTTCTTGGGGGTCTCGGGGCGCGCGTTTGA
TGGATTCCGAGGGAACGGATCCGAGTGGGGCTTCGAGGCGCCCGTCATGT
TCAAACGCAAGGGCATCTACTACATCCTGTTCGGGCCCATGTGCTGCTTC
TGTTATCAGGGATCTGGCATTCGTGTCTACACTGccacttcccccctcgg
TCCCTACACTTTTCAAGGGGACGACATTGCCTGTGCTTCCAAAGGCACCT
TTGCCGCGACTGCTCACACCCGCGCCGACAATGACGGGCCCATTCCCACT
CCAGAGCAAGGTTGCTTATTCTACGGCACGGACCAAATATCCACGACGCG
CGCTCAACAGAATTTCGTAATAGAGGTGCAGACGTCTGGGGGAGAAACGG
AGTATGTGTGGACAGGGGACAGGTGGATGCAGTCCCCGGACGGGCTGAAA
GGGCACGAGCCGCAGTATTGGTTCCCCTTGAGCTTCGACGAACAGGGACG
CATCGAGAGGGTGTCGTGGATCGATCTCTTTGTTCTGGATGTGGCAGACA
tgaccgaggaggatgaggctCTGCCGTTGCGTGTGAGCCAAAGTTGAATG
GGATACTTTTTTTCAGTCGGAGGATGTATTCTCAGCTTGTTGCTGCCTCT
GCCTACGGCCACAGCAAAGTTCGTCCTTTTTGACAACACAAAGCCTGCCT
TCGACACCGAGGGTCGAATCTTGGACGCTCATGATGGAACCATTCAACGC
TTTCATAAAGATGGGCCGTATTATATGCATGCCGTAGAGTACGGCCTTTG
TCAGGCACCAAACATCACAGGTTGCGACTCCCCTGACCGGTGTGGCTTTC
GCTTGGACCACAATCTCAGTGTGTACACGAGTTGGGACTTGAGTAGTGGC
TCCTGGGCGTTCCAAGGATACGCCTTCCCTTGGACAGAACGGCCCGCGGG
CACCTTGTTCCGGCCTTCCGCTGTCTTCAACCCCACCACTCACGAGTACA
TTTTGTGGTGGAATTATGTCTATCCTAATGGCACGTACGCAGGTTTTGCA
GTGGCTACCTCCTCAAAGCCACAGGGACCCTTTGAACAGCGTCGGGCCCA
GGTCAATATTGCGCACCTTCCTGCCGGTGATTTTCATCTCTTTGTCGATG
ACGACGGGACAGGCTACGTACTATATTCCGCGGACTTTTGGATTACCATA
GAAGAATTGACGCCCGATTTCTTGGGGGTCTCGGGGCGCGCGTTTGATGG
ATTCCGAGGGAACGGATCCGAGTGGGGCTTCGAGGCGCCCGTCATGTTCA
AACGCAAGGGCATCTACTACATCCTGTTCGGGCCCATGTGCTGCTTCTGT
TATCAGGGATCTGGCATTCGTGTCTACACTGccacttcccccctcggTCC
CTACACTTTTCAAGGGGACGACATTGCCTGTGCTTCCAAAGGCACCTTTG
CCGCGACTGCTCACACCCGCGCCGACAATGACGGGCCCATTCCCACTCCA
GAGCAAGGTTGCTTATTCTACGGCACGGACCAAATATCCACGACGCGCGC
TCAACAGAATTTCGTAATAGAGGTGCAGACGTCTGGGGGAGAAACGGAGT
ATGTGTGGACAGGGGACAGGTGGATGCAGTCCCCGGACGGGCTGAAAGGG
CACGAGCCGCAGTATTGGTTCCCCTTGAGCTTCGACGAACAGGGACGCAT
CGAGAGGGTGTCGTGGATCGATCTCTTTGTTCTGGATGTGGCAGACAtga
ccgaggaggatgaggctCTGCCGTTGCGTGTGAGCCAAAGTTGA back to top
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