rna4754, rna4754 (mRNA) Nannochloropsis gaditana

Overview
Namerna4754
Unique Namerna4754
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1229
Alignment locationCM002464.1:257126..258580 -

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Properties
Property NameValue
Productiron-sulfur cluster-binding protein
Orig transcript idgnl|cribi|Naga_100134g7.9882.mrna
Orig protein idgnl|cribi|Naga_100134g7.9882
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:257126..258580 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100134g7gene4591Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25923.1cds4742Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4754rna4754-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4754 ID=rna4754|Name=rna4754|organism=Nannochloropsis gaditana|type=mRNA|length=1229bp
TTTTGGCCATTATCAAAAAATTGTACGGACTGTGACGCCTCAACATGGAA
TCATTGCATGTAATTCATTACAGGGCGTATAGAACTACATTTTTGGCAGC
TCGACTGGGTGAGAAGGCCATGTCTGCGGGCGTCGAGGCGGCTCGGCGTC
GGTCTCGTGAAGACAGGACAACATCCCAACAGGAGGAGCAGCGACCACTC
CATGGGGAATCAACGGTACAGGGATTGGATTATGAGCTTGACAGTCCCTT
GAGACGGAATTTCAAGGCTTTGCTGGTCCTTGCTGTATCTGTCTATGGAC
TTAAAGAGGCAAAATTTGTTGAAAATTTGCTCTGGAACAAGAAAGTGGGA
GGCGCGGCTCTCGCTGTCAGCGTCGCGGCAAGGTGAGAATGGAAAACATG
AAGATTTCTAGCACAAGCACAAATTATAGAGTATGTGGAGGAGAGATACT
TGAAGTCTTGAAACATTTTTCAGGAAGGAAGGAGACCATCCGTTGGGGAG
GTTCTATAATCTTAAGCGTCTCCGAACATTCTGACCTTTCTAGCAACCAC
CCCCCATCTTCAATCTGGTACATGTTTCAGTTCCATTTTTGTCCTCCTGT
GGGCTTACCTCGACGTGTACGTGGGGGCTGTGCTGGGTAAGCAGGTAGAC
TACCCTGAGGCACGGCGGGTCACCCATGCTCTCCTCGTCTCCCTACTGGT
GACCCTCGTCTCTTTGACGATCGCCGTGTGGCCAATCTATCAAGCCACAG
CCCTAGTGCTCGTCTGCATGCTCAGTTACGGTGTCCTCTTTCAGGTGGTG
ATCCTCGTGCCCGCCTCCGTGTATAATCCTCTTTTCTTTGCACTGTATGC
GGGATTTGTGTATTTCTGGACAAGGTAAGGCGGGAAAGGAGGAGGCAAGG
GGGTACTGGTATGAGAAACCAAGGGAGAGGCAGCGGGCAGACACGAGGAT
GATGTCCTGCCAAAAAAAAGCCAATACATGAGTCGAGAACCCCATACCAC
GGTTTAAAGGCAGGCAAGATGACGTCTCTTTGCCACTCCACAACTACCCC
GTAGCAAGCAATTGCTTCCTTCGCTCCCCCCAGTTTTCATGTGCTTTTTG
CGCAATTTACAATGTGGACTCTAGCCAATCCCTACTGTCCACGTGTCTTT
TCCCACGGTTGTCCTCCCTTTCTTGGCACCAGGCGGTGGAACAGACTCGT
TCACCGCCCCGCTTCCCTAACTGCCTCCT
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protein sequence of rna4754

>rna4754-protein ID=rna4754-protein|Name=rna4754|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MSRRFVPVRETYASGRGPWKISRLIFSSIASSPEKLSTSPPRRRGRRRQP
ECDGGPLNEALVATFPGGWSDVREEIKKHAESLGFARARVTTPEPSSRFE
QYKAWIEEGKHGEMGYLAREDRLARRADLDLILPGLQAVICTMTLYWPGK
KGFPPASSMHAAPSSTTLGPSPVRPGHTASKKRGVISCYSWGEDYHNIIT
PRLKALAEWMHTRYGGRGRWYVDTGPLMERDLGERAGLGFVGKNTLLINE
HLGSGTFLAELLTTLPLPPETPRKKSGGCGKCRRCISACPTQAIHKDGYS
IDARRCISYLTIENKGSIPIELRPSMKNLVYGCDICQQVCPWNRWSWPDN
QPKTLFSPSAPSSPSTPPFLPPSASSLELSTPVLADLLRALKSDAGFMKW
FTGSPITRIGRARMLRNVAVAAGNSGEGGGREGEEGEDGEELLAVLREVW
EEENDEMVKEHLSWAIQRLEGEVESEEAVREAGR
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mRNA from alignment at CM002464.1:257126..258580-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4754 ID=rna4754|Name=rna4754|organism=Nannochloropsis gaditana|type=mRNA|length=1455bp|location=Sequence derived from alignment at CM002464.1:257126..258580- (Nannochloropsis gaditana)
ATGAGTCGGCGCTTCGTTCCCGTGCGGGAAACGTACGCATCGGGTCGTGG
ACCATGGAAAATATCCCGTCTCATTTTCTCAAGCATTGCCAGTTCTCCTG
AAAAACTCTCAACCTCCCCCCCGCGCCGACGAGGGAGACGGAGACAACCT
GAGTGCGATGGAGGTCCTCTGAACGAAGCTCTGGTCGCGACTTTCCCAGG
TGGATGGTCAGATGTCCGGGAGGAGATCAAAAAGCATGCGGAAAGCTTGG
GGTTCGCCCGTGCACGAGTGACCACGCCGGAGCCGTCGAGTCGCTTTGAG
CAATACAAAGCCTGGATCGAGGAAGGAAAGCATGGAGAAATGGGTTATTT
GGCTCGGGAGGACCGTTTGGCTCGACGCGCTGATTTGGATCTGATTTTAC
CAGGATTGCAAGCCGTCATTTGTACAATGACGCTGTATTGGCCCGGCAAG
AAAGGCTTTCCTCCGGCATCGTCCATGCACGCCGCGCCTTCCTCCACTAC
ATTGGGCCCGTCACCCGTCCGCCCGGGTCACACTGCCTCTAAGAAGCGTG
GGGTCATCAGTTGCTACTCGTGGGGCGAGGACTACCACAACATTATCACC
CCTCGTCTGAAGGCGCTGGCTGAATGGATGCATACTCGTTACGGGGGCCG
TGGGCGATGGTACGTGGACACTGGCCCGTTAATGGAACGGGATCTGGGGG
AGCGTGCAGGTTTAGGCTTTGTGGGAAAGAACACGTTGTTGATCAACGAG
CACCTTGGGAGCGGAACGTTTCTCGCTGAGCTCTTAACAACGCTGCCGCT
ACCGCCCGAAACTCCCCGAAAAAAGTCGGGGGGATGCGGAAAATGCCGAC
GCTGCATCTCCGCCTGTCCCACGCAAGCCATTCATAAAGATGGGTACTCT
ATCGATGCGAGGCGGTGCATCTCGTACCTGACGATCGAGAACAAAGGGAG
TATCCCCATCGAGTTGCGGCCCTCCATGAAGAATTTAGTGTACGGTTGTG
ATATTTGTCAGCAAGTCTGCCCTTGGAACCGGTGGTCTTGGCCGGACAAC
CAACCCAAAACACTTTTCAGTCCCTCCGCCCCGTCTTCTCCCTCCACCCC
TCCTTTCCTCCCTCCTTCCGCGTCCTCCCTGGAACTCAGCACCCCGGTAT
TGGCGGACTTGTTGCGAGCCTTAAAGTCTGACGCGGGTTTTATGAAATGG
TTTACAGGGTCACCTATCACACGGATTGGGAGGGCCAGAATGCTGCGGAA
TGTGGCGGTGGCGGCGGGTAACAGTGGGGAAGGCGGAGGAAGAGAGGGGG
AGGAAGGGGAGGACGGGGAAGAATTGCTGGCGGTGTTGAGGGAGGTGTGG
GAGGAGGAAAACGATGAGATGGTGAAGGAGCATCTGTCCTGGGCGATTCA
ACGTTTGGAAGGGGAGGTTGAGAGCGAGGAGGCAGTTAGGGAAGCGGGGC
GGTGA
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Coding sequence (CDS) from alignment at CM002464.1:257126..258580-

>rna4754 ID=rna4754|Name=rna4754|organism=Nannochloropsis gaditana|type=CDS|length=1455bp|location=Sequence derived from alignment at CM002464.1:257126..258580- (Nannochloropsis gaditana)
ATGAGTCGGCGCTTCGTTCCCGTGCGGGAAACGTACGCATCGGGTCGTGG
ACCATGGAAAATATCCCGTCTCATTTTCTCAAGCATTGCCAGTTCTCCTG
AAAAACTCTCAACCTCCCCCCCGCGCCGACGAGGGAGACGGAGACAACCT
GAGTGCGATGGAGGTCCTCTGAACGAAGCTCTGGTCGCGACTTTCCCAGG
TGGATGGTCAGATGTCCGGGAGGAGATCAAAAAGCATGCGGAAAGCTTGG
GGTTCGCCCGTGCACGAGTGACCACGCCGGAGCCGTCGAGTCGCTTTGAG
CAATACAAAGCCTGGATCGAGGAAGGAAAGCATGGAGAAATGGGTTATTT
GGCTCGGGAGGACCGTTTGGCTCGACGCGCTGATTTGGATCTGATTTTAC
CAGGATTGCAAGCCGTCATTTGTACAATGACGCTGTATTGGCCCGGCAAG
AAAGGCTTTCCTCCGGCATCGTCCATGCACGCCGCGCCTTCCTCCACTAC
ATTGGGCCCGTCACCCGTCCGCCCGGGTCACACTGCCTCTAAGAAGCGTG
GGGTCATCAGTTGCTACTCGTGGGGCGAGGACTACCACAACATTATCACC
CCTCGTCTGAAGGCGCTGGCTGAATGGATGCATACTCGTTACGGGGGCCG
TGGGCGATGGTACGTGGACACTGGCCCGTTAATGGAACGGGATCTGGGGG
AGCGTGCAGGTTTAGGCTTTGTGGGAAAGAACACGTTGTTGATCAACGAG
CACCTTGGGAGCGGAACGTTTCTCGCTGAGCTCTTAACAACGCTGCCGCT
ACCGCCCGAAACTCCCCGAAAAAAGTCGGGGGGATGCGGAAAATGCCGAC
GCTGCATCTCCGCCTGTCCCACGCAAGCCATTCATAAAGATGGGTACTCT
ATCGATGCGAGGCGGTGCATCTCGTACCTGACGATCGAGAACAAAGGGAG
TATCCCCATCGAGTTGCGGCCCTCCATGAAGAATTTAGTGTACGGTTGTG
ATATTTGTCAGCAAGTCTGCCCTTGGAACCGGTGGTCTTGGCCGGACAAC
CAACCCAAAACACTTTTCAGTCCCTCCGCCCCGTCTTCTCCCTCCACCCC
TCCTTTCCTCCCTCCTTCCGCGTCCTCCCTGGAACTCAGCACCCCGGTAT
TGGCGGACTTGTTGCGAGCCTTAAAGTCTGACGCGGGTTTTATGAAATGG
TTTACAGGGTCACCTATCACACGGATTGGGAGGGCCAGAATGCTGCGGAA
TGTGGCGGTGGCGGCGGGTAACAGTGGGGAAGGCGGAGGAAGAGAGGGGG
AGGAAGGGGAGGACGGGGAAGAATTGCTGGCGGTGTTGAGGGAGGTGTGG
GAGGAGGAAAACGATGAGATGGTGAAGGAGCATCTGTCCTGGGCGATTCA
ACGTTTGGAAGGGGAGGTTGAGAGCGAGGAGGCAGTTAGGGAAGCGGGGC
GGTGA
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Synonyms
Publications