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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100090g19.8832.mrna |
| Orig protein id | gnl|cribi|Naga_100090g19.8832 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1191422..1192156 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna475 ID=rna475|Name=rna475|organism=Nannochloropsis gaditana|type=mRNA|length=5697bp
ATGTACGTGGATGACCCAGCGTCTTTGGAACTCAAGGGAGAACTGGCGAG
ATTCCTGAAAGAGCAGATGGAGCTTCAAACGCACACGCACAAAGAGGCAA
CATCATCCGCGTCTGTGGTCTTTGTCACTGCCGCTTCTGCAGCCAAAACG
TCTGATCTGTTGACTCCGGCGCGGTTGTCCAGTGCCAAAGCTGCGAGAGG
CAAGCTCCTGGCATATTTGAGACTCTTTGCGGTAGGAGGCATCCCTAGGG
GCGGAGATGGGAGAGCACTTTTGCTCCGTATTTTCGTCACTTTCTTGTCA
CGTCCTGACAATGCTGTGGTCGTTGCTACCCTCGACTGCTTGATCAACGC
CAAACTGCCTTATCTGACGCCGTATGCAACTACTTGTAAAGCCTTGTTGA
AAGACATACATCTACGAGATGAATTGGTCCGCTTTAGCCTGACTAAGGAC
ATTCAATCGGAACATCGGGCAGAGTTTGTGCCTCTCTTGATTCGTCTTCT
GTTTGGCCGTTTCCTGGCCAAAGCCTCACGAGCGCGCACTCGCACGTCCA
AAGACAGTCCAGCGGCTCGGCGCACGGCGATCGTGTCGTTCATGGCGGGT
GCGCAGGGCGAGACTGAGTTCCGTGAATTTGTGCACTTGATGCTGCGACC
TTTCCTGGTGGATGCGACAGCGTCTTTCGACACCGAAAATAATCTCGACG
TCATAGCTGCCTCGGCAGGAAGGCGTCTGGGGTTCTTGCACCTGTTGAGC
AGTGTCATTCGACAGATGGGCTTCCATGTCCTGCCGTTCGTCGGTACTTT
TGTGGAGGTGACGCTGCGGCTGCTGGGCGAGGGGTACCGAGACGCGTCGG
CGGTCCACAATGCGAGGGAGGGCGACGAGGATGGAGAAAATGAATGGCAC
GGCGTGGGAGGGGATGACGACGACTCGCGGGATGGCAGGGATGGCGGGCA
GGAACGAGGGGACGAGGACGAGGAGAATGAGGTGGAGGACGGCGATATCC
AAGTGCGCCGGGGGCATACCCAAGGTTCTTTGCGCCTGTTGTCGACGCGT
GTCATTTCAGAGCTCTTCGACCAGTACGCTGAGTCTTTTGACTTCACCTC
CGTCGCCCCCCGCCTCTGGACTGTCCTCGGTCCTAGCGTCTCACGCCTGC
CTGCTATGTGTTCAGGAGCCCGCCAGCCCCCCGCTTTGCTGGACCTGCTG
TTAACTTTGACGCAGCACGACGCGCTTCTGCCGATATACATCGCATTTGA
GGCGACATTGACGCCCACCCTTTTGGCCTGTCTTTCTTCAGGACAAGCGC
CGCCCGCCACGGTCGCAGGACCCATCTTGAGCATCATGGAACGGCTTTGC
GAGCACGACGGTGCTTCCCATCTCCTCTCGCACTTGCCGGCTTTAGTGAA
ACATATCACAGAGCGCCTCGAAAAGGTGATGGCAGCACTGGTTCGAAGTG
CAGGCACGCTGAGGACTCGGACGCCGACCCGGGGTGAGAAACGGACGGAG
GCCCCATCCTGGATCTCGGCGCACGCCTTGCTCTTTCACGGGGATCTCGC
ATGCTTGGTACGGGAGACAGACGCAGAAGCCGACTTTTTCCAGAATATCA
TCCACATCCAAGTCCACCGTAGAGCACGGGCCTTACAACGCCTGACAAAA
CTGTTGAAGGAAAGTGACGACGAGACAGTCAAATTGGAAGAGGCAGGGCT
GGAAAATACACTGATTTTGACGCCAGCTCTGTCGTCCTCTTCTCTGGTTC
ATGTCCTCCTCCCCCTCGCCTCGCAACCCGTGCTTTCCGTGGACCGAACA
ATCCAAGTCAAAGCGCCGGATCCCACCCTGCTCCATGAATCCATATTGGC
AACGGCCGCTGTGGCTCGTCGTTTGTCTTGGTCACACTACAACGGGTTGC
TTCGACGGTTTTTGCGAGAGATCAGTTTAGCAGACCTGACTCCTGTAGGC
CAAAGCCCAGCGTCGCGGGAGAGAGCCCTGGTCAACGGCCTGTGCCACGT
CTTGGATGTTTTCCACTTTCCTCTGACCCCTCCATCTTCAGCGGACCAAG
ATGAGAAAGGATCGACCGCCGCGGTGTCGACGGTGGCCGATAGCAAGATG
GGTGGGGCAATGCAGCATGGAAGGGAGGACAAGGGAGGCGGGAAGGCGGA
GGACGAGGCAGAGGGTGTGAGAGAGAGATCCATCTCCAATTCGCCCACGG
ATGCGCTCAAAAAAGACGTGATTTGGCGCGCTGTCACAACACAGCTGCTT
CCTAGCCTACGCGGACTACTTCTCAAGGACAGCAAGGATAAGGAGGGAGG
GAAGCAGAAAGTCCTGCGTGCGCCCATGGCCCTCGCCCTCCTGAAACTCA
TCAAGATGCTTCCCCGGACCAGCTACGAGCAGGAATTGACGCGGCTCTTT
ATGTCGGTCTGCGGAACTCTCCGTAGTCGTGACTCGAACGTCCGTGATGC
CGCCAGGGAGGTCCTTGCCAAGATGGCCCAAGACCTGGGACCGACCTACT
TAGGCATGATCATCAAAGAGCTCAAGGGGGCGCTGCGAGAAGGCTACATG
CTGCATATTCGTATCTTTACGCTGCACACGGTCCTACGCTCCTTGGAGGA
GGTGTACAAACCTCCTCTCGATGCTCCGTCCCTGCCAGTACCTCGTGCCA
GCTTGGCAGCGGGCCCCTCCCCTGAGACGAGCTCTTACGGCAATGGGAGC
GACAGCAATGCCCACGCCCTGCGGCCTCCCTTGGATGCCTGCTTGACCGA
AATTGTGGCGCTCTTGACCGAAGACTTGTTCGGGGAGGCAGCGGGGGCGA
AAGAGGCGGAGGCGGAGGTGAAAAGCGCAACCATCAAAGAGGCCAAGGGG
CAGAAGGCACTGGACGGGCTAGAAATCCTCTCGCGCCTCTTGCTTTTCCG
GCCCACCTATGCCGTGGCTTGTCCTGAGGACCCGGGGGCTCTTTCGTCCG
TCCATGCCCTGGTCAAGCCATTCCTACTGCAGCTGCACGACTCGGAATCC
CCCCGTATGCACGGACGCGTCAACGAAGCCCTTCAACGGGTGGTGGCTGG
GCTGTCTGTGAATCCCAGCCTGAAGGCAGAAGAGGTCTTATTGTACGTGT
ACGGCTTGATTTCTCCCTTCGTCCTGAGCGAGGACGAGGACGAGAAGGAG
AGTGGCGGGCTGGACGGGCAAGAGCCGGAGGCGGAGGCCAGTGAGAGCGA
GGTTGATGAGGAAGATGATCTGCAGGTGATTGGAAAAGCAGCAGTGAAGG
CGACGGAAGCTTCGAAGCCAGACCTGCATCGGCCCAAGAAGGAGGTGCCA
AGCTGGCTGCCCGTGGACGGGACGCTTAAGCTAGCAGTGGAAGCCAAGCA
AGTCCAGCGGATGGCTGCAAGGGAGGAAACCCGCGTTTTGGATGGAAAGA
ATGCCCCGAAGCTCACAGGCTGGGGCCGACACGGTGCCAAAGCACGGCGT
GCCGAGGGGGGCATGTTCGGTTCTCCGGCAGCCTTGGCGGCGGGAGTCTT
GGGCTTGCGCTTGTTGCATTCGTATCTGAAACGACTGGGACAGCCCTCTG
AGGAGCTCATACCCGTTTTAGACCCCTACGTAGGTCTTCTTGCCCGCTGT
GTCCGCCGAAGAGTGAACGATAGCATCGTTCTTCTCTCGCTCAAATGCCT
CGCTCTTATGCTCCGACACCTATCCTCGCTACCGTCCTTGACATTCTTGA
CGCCACGTCTTGTTCGCTCTTCGCTCAGTCTTCTCAGCATGGCCGGAGGG
CCTGCAAACTCCCGGGACGAGATTGTGCAGTCTTGCTTGAGAATCCTCAC
CATCCTGATTGCGGCCTCGGGGAACAGCATTGAAGACGACGCGCCGCTGG
GACCACTGGGCCTCACTCAGCCGGAAAAACGGCCGTCGCTCCCGATCCCC
GCCAAGAGCCTCGGCGCCCTCATCTGTTTGCTCCGTGCTGCCGCTTTGGA
TTACGACCATGTCAACGCACCTTTCGCGCTCGTCCGGGCTTTAGTCGCTC
GTCGGGCCATGGTCCCTGAGATGTACGACCTGATGGAGCAAATGCTGGGA
ATTGCGGTGACTTCCCGTCGGCCGACAGTCCGGCAAATGGGCGGTCAAAT
CATTGTCTCCTTCCTCTTGCACTACCCCCTCAGCTCAGTCAAGGTCGCAG
GGTTTCTGCAACAGGCAGTGCGGAACCTGGACTATGAATATGCGGAAGGT
CGAATGGCCGCCTTCGGTCTTTTGCAAACTTTAATCATGAAACTGCAGGT
GTCCATGTTGAACGAGCACGCTCAAGTGGTGTTTTTCCCCATGGTCCTGC
GTTTGGTGAATGACCCTTGTCCCAAGACGAGGGCAGCCGCGGCAGATGCC
ATAAGTGCGCTGCTGCGCCGGGTCTCAGGAGATGTGTTCAACACCTTGCT
TGATTACCAATGTCGGTGGATGCGAATGCACGTGGAGAACGAAGGGCTCG
CACGTGCGGCAGCGCAGGCAGTGGGGCTGTTCGTGGATAGCCGACCCGAT
TTGTTCAAGCGGGGAGGGGAGGACGGTCTAGGCATGGAGCTCTTGGTCCT
TTTTTCTGACACCTTGGCCTCGGTGGAAAAGCGAGGGCCCGTACCAGACG
TGCAGGCGGATGGCTTGGAGAGCCCCCATGAGCGAGAGGGGGAGGCAGCC
TTGGGGTGGGAGATGGCATACCACTGCCTCGGGACGATAAGCAGGATTTA
TGCGAGGCTCCCTGGCATGGTGGAGAGCTTTTTGCACGGCTTTCCCGAGG
GAATGACGCTCTTGTCCGCCACGTCAGAGATTTTGTGCTACCGTCATGCC
TGGGTGCGCCTGGCTGCCTCGCGTGTAATCGGTCAATATTTGGATCGACG
CGCGACGGGAGGAAAGACGAGGACGCTGATTACAGGGACTCAGCTAAGGT
CCTCACCCTTTCTGTCCGATCCCGCCCATTGTGCAGCCTTGGCTAGGCGT
TTATGCGTGCAGATCGACCGTCCTTCTGTAGCTCCAGAATTGAGCCTGCG
TGCAGTCAAGAGCTTGGTATTTCTCACCTCAGCCATGGTGCATACAGAGC
TGGAGCTTGAACGTGGAGGAGGGAGCCCCATGCGGGCGGACGCAGCCCTG
GAGGGGGAAGAGGAAGACGTGGGTGGCGGGGAGTCTGAGGTCGGCGTCCA
GGAAAAAGGGGACGCACCCAAAGATTTACTCTCGTGGATCTTTCATCGGC
TTTCGTACATGGCACGACGCAAGGGAGAGGATCGGCGTTGCGCGGTTTTC
CAGTTCTTTGCCGCCGTGACCACTTTGGAGGGCCAGGCCGTGGTCGAAAG
GTTCCTTCCGCACATGCTGTCTCCATTGTACAGGGCGACCAGTGACGGAC
AAGCGGAAGCGAGCGCCCACGGGAACGACGCAGTGGAGTTGGCGAAAGAG
GTGACCGCGTTGATCGAAGAGAAAGCGGGAGCTACGGCGTTTCTGAAGGC
GTTCTCTGATGTACAGAAACAGGCGACACAGAAAAGGGCGAGCCGGAAAC
ATGCGCGGGCGGTGGAGGCAATCACAGACCCTGGGGCGGCAGCCCAACGA
AAACTGGCAAAGAACGTCATGAAACGGGAAACAATCAAGAGGAAGAAAGG
GAAGTACCGAGAAATTCGGGGGGGAGCGCCGCCCGGAGAAAGGGCCTGGA
AGAGACAGCGCTCGGTGGGAGAGGGAAACAAGGATGAGGGCATGTAA back to topprotein sequence of rna475 >rna475-protein ID=rna475-protein|Name=rna475|organism=Nannochloropsis gaditana|type=polypeptide|length=106bp
MRGLNETGGRNRFRFQKLKTRIKQGQRRVDVVHKTKSHDFMFEKKGQLDP
KPEAQGMDVVQGISQEVIPKSGCLFHDHVQGYLELNTSQAFQRLGGRSRA
VCRGAF back to topmRNA from alignment at CM002455.1:1191422..1192156- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna475 ID=rna475|Name=rna475|organism=Nannochloropsis gaditana|type=mRNA|length=735bp|location=Sequence derived from alignment at CM002455.1:1191422..1192156- (Nannochloropsis gaditana)
ATGCGGGGACTGAACGAGACAGGTGGACGGAATCGCTTTCGATTTCAAAA
GCTCAAAACCCGCATAAAGCAGGGGCAACGTCGCGTAGATGTGGTCCATA
AGGTGCGTTATTTGCTTTGTTCATCGTAGGAGCGGCCCTGCCTGCATCTC
CTGCATGCCGGTCACCTCTCCATTTTCTTTCCGCGGCAGTCACGTCGAAT
GTAAATAGTTATATTAAGTGTACATGGGAAAAGCCTGGGCCTCCTTGGTG
GCACAGAATCCTAATTGGGGGTCCATATCACATGTCGTGTACTCCAAGGC
CCATTCCCCTACCACGTTGACAATATTGACCCTCTGCTTCGTGCATCGTC
TCCCAATATTCCATCTTCAGACAAAAAGCCATGACTTTATGTTCGAAAAG
AAGGGGCAGTTGGATCCGAAGCCTGAGGCACAGGGCATGGACGTCGTTCA
GGGCATATCCCAGGAGGTCATTCCGAAGTCGGGGTGTCTTTTCCACGACC
ACGTGCAAGGGTATTTGGAGCTCAATACATCTCAAGCGTTTCAGCGCTTG
GGTAAGGACCTCGCTCCCCTGTCGAGGAGCTTGCCTGAGGTGATCCACCA
TCTCCCTGGCATTGTTCGTATCCTGACCGACCGCCTGCGCCACACGTGGG
GACCGGCCCATGAGCATGCCCTTTTCCTCGTCGCGGTACTGGCCAAGGAG
GTCGGAGCAGAGCTGTATGCAGGGGGGCATTTTGA back to topCoding sequence (CDS) from alignment at CM002455.1:1191422..1192156- >rna475 ID=rna475|Name=rna475|organism=Nannochloropsis gaditana|type=CDS|length=963bp|location=Sequence derived from alignment at CM002455.1:1191422..1192156- (Nannochloropsis gaditana)
GAGGTCGGAGCAGAGCTGTATGCAGGGGGGCATTTTGAACAAAAAGCCAT
GACTTTATGTTCGAAAAGAAGGGGCAGTTGGATCCGAAGCCTGAGGCACA
GGGCATGGACGTCGTTCAGGGCATATCCCAGGAGGTCATTCCGAAGTCGG
GGTGTCTTTTCCACGACCACGTGCAAGGGTATTTGGAGCTCAATACATCT
CAAGCGTTTCAGCGCTTGGATGCGGGGACTGAACGAGACAGGTGGACGGA
ATCGCTTTCGATTTCAAAAGCTCAAAACCCGCATAAAGCAGGGGCAACGT
CGCGTAGATGTGGTCCATAAGGAGGTCGGAGCAGAGCTGTATGCAGGGGG
GCATTTTGAACAAAAAGCCATGACTTTATGTTCGAAAAGAAGGGGCAGTT
GGATCCGAAGCCTGAGGCACAGGGCATGGACGTCGTTCAGGGCATATCCC
AGGAGGTCATTCCGAAGTCGGGGTGTCTTTTCCACGACCACGTGCAAGGG
TATTTGGAGCTCAATACATCTCAAGCGTTTCAGCGCTTGGATGCGGGGAC
TGAACGAGACAGGTGGACGGAATCGCTTTCGATTTCAAAAGCTCAAAACC
CGCATAAAGCAGGGGCAACGTCGCGTAGATGTGGTCCATAAGGAGGTCGG
AGCAGAGCTGTATGCAGGGGGGCATTTTGAACAAAAAGCCATGACTTTAT
GTTCGAAAAGAAGGGGCAGTTGGATCCGAAGCCTGAGGCACAGGGCATGG
ACGTCGTTCAGGGCATATCCCAGGAGGTCATTCCGAAGTCGGGGTGTCTT
TTCCACGACCACGTGCAAGGGTATTTGGAGCTCAATACATCTCAAGCGTT
TCAGCGCTTGGATGCGGGGACTGAACGAGACAGGTGGACGGAATCGCTTT
CGATTTCAAAAGCTCAAAACCCGCATAAAGCAGGGGCAACGTCGCGTAGA
TGTGGTCCATAAG back to top
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