rna4748, rna4748 (mRNA) Nannochloropsis gaditana

Overview
Namerna4748
Unique Namerna4748
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1081
Alignment locationCM002464.1:244333..246291 -

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Properties
Property NameValue
Productphosphate dikinase
Orig transcript idgnl|cribi|Naga_100469g1.6987.mrna
Orig protein idgnl|cribi|Naga_100469g1.6987
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:244333..246291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100469g1gene4585Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25939.1cds4736Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4748rna4748-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4748 ID=rna4748|Name=rna4748|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp
GAGCTAGCAGCACCTCTGCTTGTGCCCCTGCCTACTCGGCAATCAATGCG
TCCTCTCAGCAACGAGCCACGCCCTCACCATTCAAATTGACAGCGCAATC
GACCATGCTGGTCCGGGCTTTCCAAGGAGCTTTGCGACGGCGGGCGGTCC
TCCATAATTTGCGGGCCTCAGGCGCTCTTGCTTCTATACCGTCTCGGACC
TTGTCTGGGACGCCTGTCACGGAAACAGATGAGTACACTATATTTCCACG
AGAGGGTCCTGGGCTTGACTACAAGCTGAATTGGTCGTTAAACGGTGACG
ATGTCACGCCGGGAGGCAATGCGTACCGTAACTTGGATGCGGCGGCGTTG
CAGCAGGGAGCGAAAGGGGACAAAGCGCCTCGAAGCGGGGCAGACAAGGT
GTTGGAGGCAGGAGATTCGGTTCCCTTCGAAACATTTGACCTCCATTTGG
CGGATGTGAAGGCGGCACTGGAGAAGGCCAGCGACTTATACGTCGAAGAC
GGGGCGGTCAAGGGTGGATCCAACTTCAACATTCGGGTCATCACCGACAG
CGCTTCGTACGCCCTGGCGGCCAAGGCGTTGTTGGATCAGTCCAAGGTGT
CCGGATGGCCCTTCGAGAAGGCCGTGAACGTGTATGCCGCGGGAGGAGCG
AAGCCCTTCGTGGGCGTCATGTTCGCGGGGGGGAAGGAAGGAAATGTGAC
AGGTGCGACCGTAGCGGTGGGCGGCGCTCCTGCTACAGCGATCAAGAATG
CGATGAGCTTGGTCGCCGAAGGTATGAAAGCTTGAAATTTTGATTTTGAA
GGGAAGGGCGTTGCAAGGATGAACGTGCCTCAAGCGGACAGGAGGGCTGC
GGGCGCATTAAAGGGGCCATTCTTTTGGGCGGCTGGGTCACTGCTTTTTC
AGTGGATGGAATGCGTACTTTACGCTGCTGAGAAGAAGCGAAGACTGCAG
GGGACCATGAAAGGATAGAACGAAGGATACGATACAAGCAAATGGAAAAA
GAGGTCGCGTTCCTTGTGAGCAAGTCTCACCTTGCGGGTTTAATCCTTCG
CTTTCGTCATCCATACCTATTCTATACTACT
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protein sequence of rna4748

>rna4748-protein ID=rna4748-protein|Name=rna4748|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MTSHAAVVARGMGAPCVSGCHEIEVDNAKETLTLLQSGRVLHKGDTLTID
GATGEVMEGKVALIRSTSDADFQRVLDWADELRRLRVKANADTPDDARKA
RELGAEGIGLSRTEHMFFGPARIDVVREMILANDKAERLESLEKLFVFQK
EDMREIFSVMSGFPVTFRLLDPPLHEFLPSDPKDIAALAGRIGKDATLVA
NKIKALEEVNPMLGLRGCRLGLAFPEISEMQVRAVIHAALEAKAQGYDPR
PEIMIPLVSVAKELEVASALVHATAGQVLEEKKAVLEYKVGTMLELPRAC
LNARSLAPMMEFASFGTNDLTQSTFGFSRDDIGGFLPRYLEEKILEKDPF
ATIDVEGVGQLMRVAVEGVRGAEGGDAKALGVCGEQGGDPKSVQFCEELG
LNSVSCSPFRVPIARLAAAQAAILHKKAHQ
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mRNA from alignment at CM002464.1:244333..246291-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4748 ID=rna4748|Name=rna4748|organism=Nannochloropsis gaditana|type=mRNA|length=1959bp|location=Sequence derived from alignment at CM002464.1:244333..246291- (Nannochloropsis gaditana)
AGCGACAGACGCAAAAAGCCTTGCTGCAGTGTCGCTGGGGCAAAGAGGCA
AGCGTATCTTTCGTTGCCATGCTGTCTGACCGTTGCCCCATTCCCCTCCC
CTTCCTCTCCTCCCCCCGTAGAGCGCCAAGGGCGTCCTGACCCAGCACGG
GGGCATGACCTCCCACGCCGCCGTCGTAGCCCGTGGGATGGGCGCTCCCT
GCGTGAGCGGCTGCCACGAGATCGAGGTGGACAACGCGAAGGAGACCCTG
ACGCTCCTCCAGTCGGGGCGGGTGCTGCACAAAGGAGACACTCTGACCAT
TGACGGGGCTACGGGTGAGGTCATGGAAGGGAAAGTCGCCTTGATACGCT
CCACGTCGGACGCGGATTTCCAAAGAGTGCTGGACTGGGCGGACGAGCTC
CGGCGGTTGCGAGTGAAGGCGAACGCGGATACCCCCGACGACGCCCGCAA
AGCGCGGGAGTTAGGGGCGGAGGGCATTGGGCTCTCCCGCACCGAGCACA
TGTTCTTTGGGCCCGCCCGGATCGACGTGGTCCGGGAGATGATCCTCGCG
AACGACAAGGCCGAGCGCCTCGAGTCCTTGGAAAAACTCTTCGTCTTCCA
GAAGGAAGACATGCGGGAGATTTTCTCCGTCATGTCGGGCTTTCCGGTCA
CCTTCCGCCTCCTCGACCCGCCCTTGCACGAATTCCTCCCTTCCGACCCC
AAGGATATCGCGGCACTGGCGGGACGGATCGGAAAGGACGCGACGCTGGT
TGCCAACAAGATCAAGGCGCTGGAAGAAGTGAACCCCATGCTGGGCCTCC
GCGGCTGCCGATTGGGCTTGGCCTTCCCGGAAATCAGCGAGATGCAAGTC
CGTGCCGTGATTCATGCCGCCCTGGAAGCGAAAGCGCAAGGGTACGACCC
TCGGCCCGAGATCATGATCCCCTTGGTCTCTGTGGCCAAAGAATTGGAGG
TGGCGTCCGCATTAGTTCACGCCACGGCCGGGCAGGTGTTGGAGGAGAAA
AAGGCGGTCCTGGAGTATAAAGTCGGGACCATGCTGGAGCTCCCCCGCGC
CTGTTTGAACGCAAGGAGTCTGGCGCCGATGATGGAGTTCGCGAGTTTTG
GCACGAACGACCTGACCCAGTCCACTTTTGGATTTTCCCGGGACGACATT
GGGGGCTTCCTGCCCCGCTATTTGGAGGAGAAAATTCTGGAGAAAGATCC
CTTTGCGACCATCGACGTGGAAGGTGTCGGTCAATTGATGCGCGTGGCTG
TGGAGGGGGTGCGGGGGGCGGAGGGAGGGGACGCGAAGGCCCTGGGTGTG
TGCGGCGAACAAGGGGGAGACCCGAAGAGCGTGCAATTCTGCGAGGAATT
GGGCCTGAACTCCGTCTCCTGCTCGCCTTTCCGAGTCCCGATTGCCCGGT
TGGCAGCGGCACAGGCTGCGATTTTACACAAGAAAGCGCACCAATAAAAT
ACCAAAGAGACATTACAGATTGAAAACTGGAAAAAAAAAGTGACGAAATT
TTGCACAGGGGGAGGAGAGAGAGAACGCAATGGATAATACAACAGATGAG
GGCTGCACACAAAAGAGAAGGGGCAAGGGGAAGAACGTGTAAAGATTGAG
GAGCCGGGTGGGCCGTCACTCTTTTCAGGTGCCCCCACCACTACAAAATA
AGCCATCGCCCAATCTATAATAAAGGCATAGGATTTTTGTCCATCACAAT
GTTGGATAGGAAAGCACGGAGGAGACCATGGAAGAGGGAGCGTTGTGATC
TGACGGCATTCCCGGAAATGTACGTGGTTGATATTGGGTGCAAGCATATC
AAAAAAAGAGACAAACCACAGCACGATGAGTGTTTAAGTAGTATAGAATA
GGTATGGATGACGAAAGCGAAGGATTAAACCCGCAAGGTGAGACTTGCTC
ACAAGGAACGCGACCTCTTTTTCCATTTGCTTGTATCGTATCCTTCGTTC
TATCCTTTC
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Coding sequence (CDS) from alignment at CM002464.1:244333..246291-

>rna4748 ID=rna4748|Name=rna4748|organism=Nannochloropsis gaditana|type=CDS|length=1293bp|location=Sequence derived from alignment at CM002464.1:244333..246291- (Nannochloropsis gaditana)
ATGACCTCCCACGCCGCCGTCGTAGCCCGTGGGATGGGCGCTCCCTGCGT
GAGCGGCTGCCACGAGATCGAGGTGGACAACGCGAAGGAGACCCTGACGC
TCCTCCAGTCGGGGCGGGTGCTGCACAAAGGAGACACTCTGACCATTGAC
GGGGCTACGGGTGAGGTCATGGAAGGGAAAGTCGCCTTGATACGCTCCAC
GTCGGACGCGGATTTCCAAAGAGTGCTGGACTGGGCGGACGAGCTCCGGC
GGTTGCGAGTGAAGGCGAACGCGGATACCCCCGACGACGCCCGCAAAGCG
CGGGAGTTAGGGGCGGAGGGCATTGGGCTCTCCCGCACCGAGCACATGTT
CTTTGGGCCCGCCCGGATCGACGTGGTCCGGGAGATGATCCTCGCGAACG
ACAAGGCCGAGCGCCTCGAGTCCTTGGAAAAACTCTTCGTCTTCCAGAAG
GAAGACATGCGGGAGATTTTCTCCGTCATGTCGGGCTTTCCGGTCACCTT
CCGCCTCCTCGACCCGCCCTTGCACGAATTCCTCCCTTCCGACCCCAAGG
ATATCGCGGCACTGGCGGGACGGATCGGAAAGGACGCGACGCTGGTTGCC
AACAAGATCAAGGCGCTGGAAGAAGTGAACCCCATGCTGGGCCTCCGCGG
CTGCCGATTGGGCTTGGCCTTCCCGGAAATCAGCGAGATGCAAGTCCGTG
CCGTGATTCATGCCGCCCTGGAAGCGAAAGCGCAAGGGTACGACCCTCGG
CCCGAGATCATGATCCCCTTGGTCTCTGTGGCCAAAGAATTGGAGGTGGC
GTCCGCATTAGTTCACGCCACGGCCGGGCAGGTGTTGGAGGAGAAAAAGG
CGGTCCTGGAGTATAAAGTCGGGACCATGCTGGAGCTCCCCCGCGCCTGT
TTGAACGCAAGGAGTCTGGCGCCGATGATGGAGTTCGCGAGTTTTGGCAC
GAACGACCTGACCCAGTCCACTTTTGGATTTTCCCGGGACGACATTGGGG
GCTTCCTGCCCCGCTATTTGGAGGAGAAAATTCTGGAGAAAGATCCCTTT
GCGACCATCGACGTGGAAGGTGTCGGTCAATTGATGCGCGTGGCTGTGGA
GGGGGTGCGGGGGGCGGAGGGAGGGGACGCGAAGGCCCTGGGTGTGTGCG
GCGAACAAGGGGGAGACCCGAAGAGCGTGCAATTCTGCGAGGAATTGGGC
CTGAACTCCGTCTCCTGCTCGCCTTTCCGAGTCCCGATTGCCCGGTTGGC
AGCGGCACAGGCTGCGATTTTACACAAGAAAGCGCACCAATAA
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Synonyms
Publications