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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100400g1.8592.mrna |
| Orig protein id | gnl|cribi|Naga_100400g1.8592 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:197057..198251 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4730 ID=rna4730|Name=rna4730|organism=Nannochloropsis gaditana|type=mRNA|length=756bp
ATGAAGGAGGGAAGGAAGGCGGACGGGTGGGAGAGCGGGGGCTGGGAAGG
GATGCATTATTTGTTGGTGAAGCTCCAGTATCCCTATAATTGGGGCTTGA
TCGATTTGATCACGCATGTGTGGTACCTACAAACTTTATTTTCCAATTTA
TGTATGCATGTGTGTACGTGCGTATTCCGAGGAGGGAAGATATGCGAGAA
GAGAGTGTTCAGGGGGCCGCATTGGCCCTCCAGAGATCGAGTGAAAGAGA
AACCTCCCCCTAGGAGGGGCGTGACACCCGTGCGGTGTACCGACAAGGCC
GGAGGAATGGAGTTTGCATGCCTGCTTTCCCTGATGGATCGCTCAAGATC
GCATCTTACATGGCAACGGACGAAGAAGGCGAAAACGGCGGCAATAGACA
GCGACTGTAGACGGACATATAACACAGAGAGGGGGCGACCACTGACAAAA
CCAGACTCCGTAAGAGGAAGATGGTGGGCGAAGGAGTCCTGCAGCGGCGG
TGAAATGGAAGCAATTTCGGTTTGGGTCGCCCCTCCTTATGCCTTCCTCA
TAATCCCACAGGTACCAGCGTGCGACGAGTCCCCACAAAGAATATATCCC
CCTCTTATAAAAGGGAAGGAAAAAGAGAAAAAAAATGAGCGAAGCGCCAA
GATGCGAGAGGCCGAGAAGGTAAAACGGCAGAGGATGTGGTACTTCCTTG
TTTTGCCCCTCTCCCTTTCGCGGACTACGCGGCCCTTACTTGGGAGCGGA
ATATAA back to topprotein sequence of rna4730 >rna4730-protein ID=rna4730-protein|Name=rna4730|organism=Nannochloropsis gaditana|type=polypeptide|length=301bp
GSGPHLDLVSPPRLAQLPQGLGAEGGAGVGRRLPFLPPFLRHHRSFFSRY
LPSLLLLCTLSSFPPSNRSNPPHSRAGWFAFPFDGLFVFPGGPSSSLNAD
STLAPFQSFVLLRHAWPVQKLEFAAASPDFYHRVAGMYFTIAFSLSTLYL
NAYCMYHRISRRRTENRFSLSQIMGREILLLLFLVSSCEASALLHRFLLH
CIFSVLASVPAAWSAVLCPSLLTTAKEVGLGFYRLGIELMLFSSLLLGPA
LGPQDLGILGTGHLGGREGGEGGAAWENRLQAMALTRFSLCAVPRGLLEL
L back to topmRNA from alignment at CM002464.1:197057..198251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4730 ID=rna4730|Name=rna4730|organism=Nannochloropsis gaditana|type=mRNA|length=1195bp|location=Sequence derived from alignment at CM002464.1:197057..198251- (Nannochloropsis gaditana)
GGGAGCGGGCCGCACCTCGACCTCGTCTCCCCCCCCCGTCTGGCCCAACT
CCCTCAGGGTCTGGGAGCGGAGGGAGGGGCGGGGGTAGGGCGCCGCCTAC
CCTTCCTCCCTCCCTTCCTCCGCCACCACCGGTCGTTCTTCTCCCGCTAC
CTCCCCTCCCTCCTCCTCCTCTGCACCCTGTCCTCCTTCCCTCCCTCGAA
CCGCTCCAACCCCCCTCATTCGCGCGCCGGCTGGTTCGCTTTTCCCTTCG
ACGGCCTTTTTGTCTTCCCAGGCGGACCCTCCAGCTCCCTCAACGCTGAT
TCCACCCTCGCACCCTTCCAATCCTTCGTCCTCCTCCGCCACGCTTGGCC
CGTACAGAAGCTTGAATTTGCGGCGGCGAGCCCGGATTTCTACCATCGGG
TGGCTGGCATGGTAAGGGTCATGGCTAAGGGCGGGAAAGAGGGGAGGGGA
GAGCAAATGGGACACACACTCGTTTGGAAAGGGATGGGGGGGGGGGGGGC
AAGAGCGGACGGCTCCCGGTCTCACTTTCTTCACGTGTCTCGTTCCCTTC
TTTTCCCCCCTTGGCACAGTATTTCACCATCGCCTTCTCCCTGAGCACCC
TCTACCTAAACGCCTATTGCATGTACCATCGGATTTCCCGCCGACGGACC
GAGAACCGCTTCTCTCTGTCGCAGATCATGGGGAGGGAAATCCTCCTCCT
CCTCTTCCTCGTCTCCTCGTGCGAGGCCTCCGCCCTCCTCCACCGCTTCC
TCCTCCACTGCATCTTCTCGGTCCTGGCCTCTGTCCCCGCCGCCTGGTCC
GCCGTCCTCTGCCCCAGCCTGCTGACGACGGCGAAGGAGGTCGGTCTGGG
CTTTTACAGGCTGGGTATCGAACTCATGCTGTTCTCGAGCCTTTTGTTGG
GCCCGGCCTTGGGGCCGCAGGACCTCGGCATTTTGGGCACCGGGCATCTG
GGGGGAAGGGAGGGCGGGGAAGGGGGAGCGGCGTGGGAGAACCGGTTGCA
GGCGATGGCCTTGACGCGCTTCAGCCTCTGTGCGGTCCCGAGGGGCCTCT
TGGAGCTTCTGTGAGTGGAGGGAGGGACGGAGGGAAGGGGGGCGAGAAAT
AAAATTGAGCGGCGTGACGGCCAGGGGTCCGGGGCCAGTGTTTGTGTGGA
AGAGAAGAAAAGGAAAGAAGGTTAAGGGTGTAACATTGTTCAGGC back to topCoding sequence (CDS) from alignment at CM002464.1:197057..198251- >rna4730 ID=rna4730|Name=rna4730|organism=Nannochloropsis gaditana|type=CDS|length=1812bp|location=Sequence derived from alignment at CM002464.1:197057..198251- (Nannochloropsis gaditana)
TATTTCACCATCGCCTTCTCCCTGAGCACCCTCTACCTAAACGCCTATTG
CATGTACCATCGGATTTCCCGCCGACGGACCGAGAACCGCTTCTCTCTGT
CGCAGATCATGGGGAGGGAAATCCTCCTCCTCCTCTTCCTCGTCTCCTCG
TGCGAGGCCTCCGCCCTCCTCCACCGCTTCCTCCTCCACTGCATCTTCTC
GGTCCTGGCCTCTGTCCCCGCCGCCTGGTCCGCCGTCCTCTGCCCCAGCC
TGCTGACGACGGCGAAGGAGGTCGGTCTGGGCTTTTACAGGCTGGGTATC
GAACTCATGCTGTTCTCGAGCCTTTTGTTGGGCCCGGCCTTGGGGCCGCA
GGACCTCGGCATTTTGGGCACCGGGCATCTGGGGGGAAGGGAGGGCGGGG
AAGGGGGAGCGGCGTGGGAGAACCGGTTGCAGGCGATGGCCTTGACGCGC
TTCAGCCTCTGTGCGGTCCCGAGGGGCCTCTTGGAGCTTCTGTGAGGGAG
CGGGCCGCACCTCGACCTCGTCTCCCCCCCCCGTCTGGCCCAACTCCCTC
AGGGTCTGGGAGCGGAGGGAGGGGCGGGGGTAGGGCGCCGCCTACCCTTC
CTCCCTCCCTTCCTCCGCCACCACCGGTCGTTCTTCTCCCGCTACCTCCC
CTCCCTCCTCCTCCTCTGCACCCTGTCCTCCTTCCCTCCCTCGAACCGCT
CCAACCCCCCTCATTCGCGCGCCGGCTGGTTCGCTTTTCCCTTCGACGGC
CTTTTTGTCTTCCCAGGCGGACCCTCCAGCTCCCTCAACGCTGATTCCAC
CCTCGCACCCTTCCAATCCTTCGTCCTCCTCCGCCACGCTTGGCCCGTAC
AGAAGCTTGAATTTGCGGCGGCGAGCCCGGATTTCTACCATCGGGTGGCT
GGCATGTATTTCACCATCGCCTTCTCCCTGAGCACCCTCTACCTAAACGC
CTATTGCATGTACCATCGGATTTCCCGCCGACGGACCGAGAACCGCTTCT
CTCTGTCGCAGATCATGGGGAGGGAAATCCTCCTCCTCCTCTTCCTCGTC
TCCTCGTGCGAGGCCTCCGCCCTCCTCCACCGCTTCCTCCTCCACTGCAT
CTTCTCGGTCCTGGCCTCTGTCCCCGCCGCCTGGTCCGCCGTCCTCTGCC
CCAGCCTGCTGACGACGGCGAAGGAGGTCGGTCTGGGCTTTTACAGGCTG
GGTATCGAACTCATGCTGTTCTCGAGCCTTTTGTTGGGCCCGGCCTTGGG
GCCGCAGGACCTCGGCATTTTGGGCACCGGGCATCTGGGGGGAAGGGAGG
GCGGGGAAGGGGGAGCGGCGTGGGAGAACCGGTTGCAGGCGATGGCCTTG
ACGCGCTTCAGCCTCTGTGCGGTCCCGAGGGGCCTCTTGGAGCTTCTGTG
AGGGAGCGGGCCGCACCTCGACCTCGTCTCCCCCCCCCGTCTGGCCCAAC
TCCCTCAGGGTCTGGGAGCGGAGGGAGGGGCGGGGGTAGGGCGCCGCCTA
CCCTTCCTCCCTCCCTTCCTCCGCCACCACCGGTCGTTCTTCTCCCGCTA
CCTCCCCTCCCTCCTCCTCCTCTGCACCCTGTCCTCCTTCCCTCCCTCGA
ACCGCTCCAACCCCCCTCATTCGCGCGCCGGCTGGTTCGCTTTTCCCTTC
GACGGCCTTTTTGTCTTCCCAGGCGGACCCTCCAGCTCCCTCAACGCTGA
TTCCACCCTCGCACCCTTCCAATCCTTCGTCCTCCTCCGCCACGCTTGGC
CCGTACAGAAGCTTGAATTTGCGGCGGCGAGCCCGGATTTCTACCATCGG
GTGGCTGGCATG back to top
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