rna4727, rna4727 (mRNA) Nannochloropsis gaditana

Overview
Namerna4727
Unique Namerna4727
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length267
Alignment locationCM002464.1:191389..191703 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100400g4.8593.mrna
Orig protein idgnl|cribi|Naga_100400g4.8593
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:191389..191703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100400g4gene4564Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4727rna4727-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25956.1cds4715Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4727 ID=rna4727|Name=rna4727|organism=Nannochloropsis gaditana|type=mRNA|length=267bp
ATGGATTCAGAATCAGAATTAGAAGAATACTCTGGTCAAACAGGAGAAAT
ATGGATTCAGATTTGCCTGTGGATGAAAGAAATTGAACCACGCGCAACAC
AACATCTTGATTACCTCAACTTAGCTAGAGACAGTGGAATTGAGGAGTCG
TCCTCGGATGCCCACACCTCGTTGACTTTTTTTCCAGAAATAGCACATAA
TCAAATCGTATTCTTCCCTTTGTTTTATCGTGACGAGGGAGAAATGAATG
CCACGGTTCAAAAGTGA
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protein sequence of rna4727

>rna4727-protein ID=rna4727-protein|Name=rna4727|organism=Nannochloropsis gaditana|type=polypeptide|length=79bp
MHQLKCRSYMLDHSCVRGWPHFQTTTDERSMCVKALHCMKGDKNYRNPVY
YDLLCELICYSHLLSMIGHISAFFDLATA
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mRNA from alignment at CM002464.1:191389..191703-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4727 ID=rna4727|Name=rna4727|organism=Nannochloropsis gaditana|type=mRNA|length=315bp|location=Sequence derived from alignment at CM002464.1:191389..191703- (Nannochloropsis gaditana)
ATGCACCAACTAAAATGTCGCTCATACATGCTAGATCATGTATTATTACA
CCTTTATTCAGGGAGCCGCTTTTCTATTTTTTTTTCCCCCACCGCAATCT
CGAGCGGCACATAGTCGTGCGTTCGTGGATGGCCCCATTTCCAGACAACA
ACAGATGAGCGGTCAATGTGCGTAAAGGCTCTTCATTGTATGAAAGGTGA
CAAAAACTACAGAAACCCGGTCTATTACGATTTGTTATGTGAGTTAATAT
GCTACAGTCATTTACTCTCTATGATTGGCCATATAAGTGCTTTCTTTGAT
TTAGCAACGGCGTAA
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Coding sequence (CDS) from alignment at CM002464.1:191389..191703-

>rna4727 ID=rna4727|Name=rna4727|organism=Nannochloropsis gaditana|type=CDS|length=480bp|location=Sequence derived from alignment at CM002464.1:191389..191703- (Nannochloropsis gaditana)
TCGTGCGTTCGTGGATGGCCCCATTTCCAGACAACAACAGATGAGCGGTC
AATGTGCGTAAAGGCTCTTCATTGTATGAAAGGTGACAAAAACTACAGAA
ACCCGGTCTATTACGATTTGTTATGTGAGTTAATATGCTACAGTCATTTA
CTCTCTATGATTGGCCATATAAGTGCTTTCTTTGATTTAGCAACGGCGTA
AATGCACCAACTAAAATGTCGCTCATACATGCTAGATCATTCGTGCGTTC
GTGGATGGCCCCATTTCCAGACAACAACAGATGAGCGGTCAATGTGCGTA
AAGGCTCTTCATTGTATGAAAGGTGACAAAAACTACAGAAACCCGGTCTA
TTACGATTTGTTATGTGAGTTAATATGCTACAGTCATTTACTCTCTATGA
TTGGCCATATAAGTGCTTTCTTTGATTTAGCAACGGCGTAAATGCACCAA
CTAAAATGTCGCTCATACATGCTAGATCAT
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Synonyms
Publications