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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100315g3.5223.mrna |
| Orig protein id | gnl|cribi|Naga_100315g3.5223 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:129113..131904 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4709 ID=rna4709|Name=rna4709|organism=Nannochloropsis gaditana|type=mRNA|length=601bp
ATGTACAGGGTACGCACATCAGTATTCCGCAATGGTGCAGCGGGAGGCGA
TGCCGGGCTTCTGGCAGACTTTGCTGGAAAAACGCGGCTCCAGCAATGGT
GATGCATGCGTGATGCTTCCTCTACTTGCGACCATCCTATGCATCCTGGG
AGCGAGCATCTACTCCTCCTACATTGCCCGCCCAACCTCGTACCCGGGAG
GACCACGGGCGCAAAAACAAAAACGCCGGGCGGCATGGTTGCCCCGTTCC
TCCATCTTCTCGCCCGGTTGGGTGTTTGCTGAAGCGGAGACGTCAGTGGC
AGTGACGGAACGGGAGGTCTTGACGCTCCTGGGCGAGCCGGTACCCTTGA
CCGGGGAAGCGGCGGGGCGGCAGACGTGGCATTGGGATCCGAAGAAAGGG
AAAGACTTGGCCGGGCGGAAAGCCGACTATAGCTTCAGCGCCGCCCGGAA
CCCGAACAGCGCCGACAAGGTGTTCCGTACCCAGCAGGTCAATCAGTGGA
AAGGTCCCCGGCCGAACTCAAAATCGCGCCCGAAGACGGCGCGGGAAGCT
GCACACAAGGCCATGGCGTACTACCAGATGCTGCAGTGCGAGGATGGGTA
G back to topprotein sequence of rna4709 >rna4709-protein ID=rna4709-protein|Name=rna4709|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MSGRHPPLPSLPSGGAGPRKEGRHGGEKRCKLSFWTCPQPGPLPDPLSRP
GQGGRLARSSVRGGWGTHLPPPCLPLHVVLFPPSIPPSLSGTGLEPSHGL
GPVHRHLPAETGVDRGRGGRRGGGRPAISRAAAGSANGSKRAGGGDVVGE
IAMSGGDFDRDLRRIPRDALGGISG back to topmRNA from alignment at CM002464.1:129113..131904+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4709 ID=rna4709|Name=rna4709|organism=Nannochloropsis gaditana|type=mRNA|length=2792bp|location=Sequence derived from alignment at CM002464.1:129113..131904+ (Nannochloropsis gaditana)
TTTTTTTAATGGATCTATCGCGCCGTGACGTTTTCTTGGCGACAGCctga
aggcggggaggttgTTCCATCTTACGGCCTTGAGTACATGAAAAGCAGCC
GCGCAGCAAATAGATGCCTTTTAAGTTGACGTGGCAACATGTCTCAATCG
ATTGAGAAGTACTGTCTGTTCTTGCTTTCAGGCAAAGTTCTGCAATTCCA
GTGCATTATAATGGGAAAAACATAAATGTCCAGGCAACGTACAGTCATGC
CGTCCATCACATTATCCCTAACATTATTATCAGAGGTCCAGCTTTGAGCC
AATCATCTGTTTACATGGGAAAATGCGGAACGATATACTTTTTAGTAGAG
TTGCCAGGGTAGGGGGCCAAGGCTGCGATTAGTTTCTTGTGGCTGTAAAC
GTCGATGGTACATAATTTTCCCCATTTGCTAAAAAAGCACCCACACACTA
CAAAGAAAACTTTACCGCCCATGACAGCACCTCAGCAGCCAGCAGCTACT
TTCTGAGGCTTGTTTCCGTCTTCACGCGTGGAGGCAAACAAGGACCCATG
TAGTCGCATTTCATGACGTTCGAGGAGGTACACGAGATCTTCGAGCGAGA
GTTTTATTTTGTCCCCGCCCACATCGTGGTACAGGGTGGGAGCCGTCTGC
AACATGTCCTGCAGGCGGCTTTTGGCTTGGGCAATAAGGAGGCGGACGCC
GTGATCTCGCATATCTTTGGCAACTTTTCCAAGCGCACGCAATCCACTAA
AGTCCATGAAATTTATGCCCGAGGCATCCAGGACAATGAAGAGATGGCAG
CATTTTTTGGCTTCTCGACCGTCcccatcctttctctttctttgaaAGGG
AAGACACCGTGACGCGAGGCTGTCTGTGCGGTTATCATCCGGCAAGGCGA
CGCGTAGAGACTCCATTTCCTGTATTGTGGTCGCCGTGGGCGATGTCCAG
CCGGCACTTCCCCGTTGCACACCTTCACTGCCCAACGTTTCTTGACAGCC
AGGCATCCAGTCACGAGTCGTGTTGCCATGTCCCCGCACATGTGTACACG
CGCATACGACCGTCAGGCTGGTCATGTGCGGGGCTGTCTTTACCACATGC
GTCATGGAGGCCTCGGGACCGTTCAatcccttcgcctccgcctccatcgt
tTTGGCCGCACGCAGGAGCAGGCCGGTGACAAAGTCTCCGTTGACAAAGG
TCAAGGCCAATGGATCACACGTGCTTGAAGACAAACGAGCCAATGAAACG
TCGAAATTTCTCATCGGATCCTCGCATCTTTGATGCCATTGCTTCCTTTC
TCGCTCTGCCCCCGCAAGCGAAAGAGGCCTTGCCCTCTGTTCACTCGCAA
GGCTTTTCACTCGGTTCCATTCCTGTCTTGAGAGAAAGCGGACTGAAGGG
GCAATTTCTCGAATGGAAGGTGGGCCTCAGCATGGGCTACGAGTCTTCCA
GGCGACGGGAACGAGGAGAGCTGCGAAGGGGTAAGGGGTTCTTCGGCCGG
GACTGActggcgtgggagggagagaagtgATTCGCGAGAAGGAGATCAAG
cccgctcttctccttttctcacAACTTTCGAAAGGCCCCAATGTCTGGCC
GACATCCTCCACTGCCCTCGCTGCCctccgggggggcgggaccgagaaag
gaaggacgacatggaggagagaagagatgCAAGCTTTCTTTCTGGACATG
CCCTCAGCCGGGCCCTCTCCCGGACCCTCTCTCGCGCcctgggcagggag
gaaggctggcTAGAAGCAGTgtgcggggagggtggggaacgcatctccct
cctccgtgccttCCATTACATGtggtcctcttccctccctccatccctcc
ctccctctcgggcACTGGGCTCGAGCCCTCACACGGACTGGGGCCTGTTC
ACCGTCATCTTCCAGCAGAGACAGGAGTCGataggggaagaggagggcga
cgagggggagggaggcctgcaATTTCGAGGGCGGCCGCAGGGAGCGCGAA
TGGAAGCAAgagagcaggggggggagatgtAGTGGGCGAGATTGCCATGA
GTGGGGGAGACTTTGATCGTGATCTGCGGAGAATTCCTCGCGATGCTCTC
GGAGGGATCAGTGGCTGAGGACAAAGCccgggtcggaggagggagggagg
gagggagggagggagggaccgaaaGAGAGAGACGGCCCTTCCATACACCT
GTCCAAAGGGCGACGCTCTCCCCGAGTCCTCCTACGATACACTTATGCCG
Gcgacggggcgggcgaggttacccgaggagaggcgggaaggagggagggg
aggggatggacacGAATACAAAACTCTGCtgggggaatggggggatACGA
GTGGGCAAGGCGGTGAAGCGCGTCCCTTGACATTTGGAGAGTACCTCAGC
ATAACTCAaagtgaaaggaaaggagaaggattTATTGAAGCTGAACGCCT
CATCCCTAGATATTTTTCTCTTAAAAAAAATCTCGAGTTTTGGAGGTGAG
AATTTTTGAATTTAGAGCGCATGTGTGGAACAGTAAAAGCAAGAGGCAAT
GAATAGAAAAAGCTGCTGCTCAACGATGGTGGATGAGCGTTTGTAGAGAT
TTTGTACGAGACAAGATTGCTTAATTCTACAATTTCAGTAAGCGTGGACA
TTTTTTTGCTATACCTAAACAATgctgggagcaggagccgaCATAAGTAT
CATTTAACACCCTGTTAAGAGGCTTTTAATTTTCATAGCTTGGATTGGAA
GCACATTTGTGAATCTTCCGAGCATGCTCAAGCCTCTTCTTT back to topCoding sequence (CDS) from alignment at CM002464.1:129113..131904+ >rna4709 ID=rna4709|Name=rna4709|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at CM002464.1:129113..131904+ (Nannochloropsis gaditana)
ATGTCTGGCCGACATCCTCCACTGCCCTCGCTGCCctccgggggggcggg
accgagaaaggaaggacgacatggaggagagaagagatgCAAGCTTTCTT
TCTGGACATGCCCTCAGCCGGGCCCTCTCCCGGACCCTCTCTCGCGCcct
gggcagggaggaaggctggcTAGAAGCAGTgtgcggggagggtggggaac
gcatctccctcctccgtgccttCCATTACATGtggtcctcttccctccct
ccatccctccctccctctcgggcACTGGGCTCGAGCCCTCACACGGACTG
GGGCCTGTTCACCGTCATCTTCCAGCAGAGACAGGAGTCGataggggaag
aggagggcgacgagggggagggaggcctgcaATTTCGAGGGCGGCCGCAG
GGAGCGCGAATGGAAGCAAgagagcaggggggggagatgtAGTGGGCGAG
ATTGCCATGAGTGGGGGAGACTTTGATCGTGATCTGCGGAGAATTCCTCG
CGATGCTCTCGGAGGGATCAGTGGCTGA back to top
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