rna4682, rna4682 (mRNA) Nannochloropsis gaditana

Overview
Namerna4682
Unique Namerna4682
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length804
Alignment locationCM002464.1:53855..55204 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100499g1.1689.mrna
Orig protein idgnl|cribi|Naga_100499g1.1689
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:53855..55204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100499g1gene4520Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26006.1cds4670Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4682rna4682-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4682 ID=rna4682|Name=rna4682|organism=Nannochloropsis gaditana|type=mRNA|length=804bp
GGTTACCGCGGGATTTCATGGAGCAATGCGTGTCGAGTGTCAAGTTGTGT
CATCGTCGCAAGCTTTTATCCGCTCAAATAGCATACTGTGTCCGAAAAGG
CGTCAAAATCCGTTCTCTTCATGAAAAGTACGGGGGCAACGAGGGCACAA
CAATGCAGCACAGCGGGAGCAACAGGGTTCAAAATAGCAGCAATTTCTCA
GAATGGCTGCAGCAATGCTATTATATGAGTCTACCGTACGCAGGCTCGGC
TATAGAGCTACAAGTGGTTTTGTATGCAGGGTCGGGGGAAGACGAGGAGA
GCGACGAGGACGATGAGGAGATCCCGGTGAGAGAGAGGGTGCAAGGAAAA
AGTGAGAACCATGGAAACGCACTTGTCAGACACGGACACATTTGCTAGAT
CAAAGCCTTCCTACGCATCCTCCCGTGCCGGCACCTCTGAACGTAATTTT
AATTCTCTACCCCTTCCAATGTCCTTCGTGGACCTTACCCCCAGCAGCCC
CTGCCGCTCCCGCTCCCGGACATCATTCCCCTCTCTCTCGATGCAGAGAG
CTGCAATTCTTCGTCCACCCTCCATGAGGCCTACAATTCCCTTCCTTGGG
ACGCTCTCTGCCATTCACCGGCTTTCCAGGCATGGGCGGAGGGGGGGGCC
TATAAAGGCATATCAGAGGGCCTTCCTCGTAGCTTCCGGGCAGGGGCCTT
GTATGATCTGCTGGAGGCAATCAAGACACAGGCGAAGAAATCCCATGAAA
AACGGCTCAAGGACTTGATTTTGACGGAAGACGTGCGCTTGGAGGTGGAG
ACAC
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protein sequence of rna4682

>rna4682-protein ID=rna4682-protein|Name=rna4682|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MGDRSLKVSSRERVNGRVERREGGERLGHCLKPLSVSCFIEGLQQEILSL
RLDLPPSVPYLTLSHHVASCHLSCAFPFHCLHVLLLNLVISVTFYARTPS
LSLLRAFSFFRLPSVNLRANRFLDILFFFRYFLRFLVSSLLLLLFDKYAF
CWKKQGEGRVVRPLF
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mRNA from alignment at CM002464.1:53855..55204-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4682 ID=rna4682|Name=rna4682|organism=Nannochloropsis gaditana|type=mRNA|length=1350bp|location=Sequence derived from alignment at CM002464.1:53855..55204- (Nannochloropsis gaditana)
CCCTACGCCTCCCTCAGCCGCCAGCGCGGGTCAAGTTGTGTCTTCCAACG
TGGTTTGTCAGAAGGGAACCTCCATCTGCAAGGGCTTTGGTTTCGTGACG
ATGCGCACCCAAGCCGAGGTCAGGCCCCGATTTCTCCGCGTATTTCTCTA
AATTGCTTTCGTTTGCTCTCTCTTTCCCCCCGCTTTTGATTGTTTTGTGG
ACCCGGTGGGCGGTGCTCACGAAGCCTGGGGTTGGGTCTCCTCCCCTCCT
TCCTCGCCTCCCCTTTTTCCCGCCGCCTTCCACTCCTCCTTCCTCGCGCC
TCACCCGGCGCAGGTTCTGCACCTGCGCTTTCTCTTTTGCTACCTCCTCC
TCACCTTCTCGGCCTCGTTTCGTTGTACCCCTCACCAGGCCTCGGCGGTC
ATCCAAGCATTGAACGGCCTGCCCATGGGCGATCGGTCTCTCAAGGTCAG
TAGCAGAGAAAGAGTAAATGGGAGGGTGGAAAGGAGGGAGGGAGGGGAGA
GATTGGGTCACTGTTTGAAGCCTTTATCCGTTTCTTGCTTTATTGAAGGA
CTTCAACAAGAGATCCTCTCTCTTCGTCTCGACCTTCCTCCTTCCGTCCC
ATACCTCACCCTGTCTCACCACGTTGCTTCTTGCCACTTGTCATGCGCAT
TCCCTTTTCATTGCCTTCATGTCCTCCTTCTTAATCTTGTCATTTCCGTT
ACCTTCTACGCACGCACGCCCTCCCTCTCGTTGCTTCGCGCATTTTCTTT
TTTCAGGTTACCTTCCGTCAATCTTCGAGCAAATAGGTTTCTGGATATCC
TATTCTTCTTCAGATACTTTTTACGCTTCCTGGTCTCCTCACTCCTGCTT
TTGCTTTTTGACAAGTACGCTTTTTGCTGGAAGAAACAAGGAGAGGGTAG
GGTTGTGCGGCCTCTCTTTTAAAAATGTGAAAGCCCACTTCCTACCTTCT
TCGGATGCTTTCTACTCTTCCAAGCTGCTTGCCATGCAACGCTCCCTTTC
TCTTCGTCCTTCGTTTTTCTCGGCAGCTTTATTTTCCTCAAAATGCGACC
GAGTGTAAGACTTTCTACCTAAGCCATACGACGCCGGTCAGCGGAGGGTT
TGGGAGCAAGTGTGACTCATGGAGAACGTGAAAAAAGCGAGTCCAGGAGA
TAAAGAACTGAGCCGTATTCAAAATGATTTTCCAATGTCACAGGTGCACA
GCCTGGAGGTGCCCGAACCCTCGAAGAAGAAAAAATATTTTATGCGCGAC
CTGATGACGCTTGCACGCTTTATATTTCTAGGCCTCCTCTAGCTCCCTGC
ACCCCGAATTCACATCATTTTTTTGTATATAATGACCTTAAAAACATAGC
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Coding sequence (CDS) from alignment at CM002464.1:53855..55204-

>rna4682 ID=rna4682|Name=rna4682|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at CM002464.1:53855..55204- (Nannochloropsis gaditana)
ATGGGCGATCGGTCTCTCAAGGTCAGTAGCAGAGAAAGAGTAAATGGGAG
GGTGGAAAGGAGGGAGGGAGGGGAGAGATTGGGTCACTGTTTGAAGCCTT
TATCCGTTTCTTGCTTTATTGAAGGACTTCAACAAGAGATCCTCTCTCTT
CGTCTCGACCTTCCTCCTTCCGTCCCATACCTCACCCTGTCTCACCACGT
TGCTTCTTGCCACTTGTCATGCGCATTCCCTTTTCATTGCCTTCATGTCC
TCCTTCTTAATCTTGTCATTTCCGTTACCTTCTACGCACGCACGCCCTCC
CTCTCGTTGCTTCGCGCATTTTCTTTTTTCAGGTTACCTTCCGTCAATCT
TCGAGCAAATAGGTTTCTGGATATCCTATTCTTCTTCAGATACTTTTTAC
GCTTCCTGGTCTCCTCACTCCTGCTTTTGCTTTTTGACAAGTACGCTTTT
TGCTGGAAGAAACAAGGAGAGGGTAGGGTTGTGCGGCCTCTCTTTTAA
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Synonyms
Publications