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Properties
| Property Name | Value |
|---|
| Product | alpha beta hydrolase fold-3 domain protein |
| Orig transcript id | gnl|cribi|Naga_100525g1.10518.mrna |
| Orig protein id | gnl|cribi|Naga_100525g1.10518 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:6557..8929 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4664 ID=rna4664|Name=rna4664|organism=Nannochloropsis gaditana|type=mRNA|length=495bp
ATGGCCAAGATTGCGGAGGGTCAAACGCTGCCTCTCGAGAAAATTACCTT
CAAAGTTCTGAAGGATGGCAAGGCCACTGATCTCACGGGCACGGACCTCT
TCAAGGGCAAGAAGGTAGTATTGTTTGGCGTGCCGGGCGCCTTCACACCG
ACGTGTACGAACACCCATGCCCCAGAGTACCTGGCGATGTACGAGAGCTT
CAAAGCGAAGGGCGTCGACGCGATCTATTGCATCGCCAGCAACGACTGCT
TCGTGACTTCCGCCTGGGCGAAGAGTTTGGATGCGGGGGATAAGGTGAGC
ATCTTGGCCGACGGAGACTGCGGCTTCGCGAAGCTAGTGGGTCTGACCGT
GGAGACGGGAGGCTTTGGCGGACTTCGCCTCAGCCGCTTTTCCGCCCTGG
TCGAGGACGGGTCGGTCAAGAAGCTGCACCTGGAGGAAGGAGGGGGGTAC
ACGGGCGTGAGTGGCGCGGAGCAGATGTTGAAGGACTTGGAGTGA back to topprotein sequence of rna4664 >rna4664-protein ID=rna4664-protein|Name=rna4664|organism=Nannochloropsis gaditana|type=polypeptide|length=616bp
MPPLPPHPPPANLTLQALEETSTLLHEAMHLTKSMGGSRSPVPLHETSLT
LAALDLSLTFRVHKLIPGVEEMSNDPNKVTYHCLQQAVQALKQAGGPTNH
PHGGYGGADSILLYLSHALATLIKCLKGLQQVTRVKEVFQTRLYFATLVG
LAWFCKKKRQGRRLVLWVVGMGYLARKLHFLSLQRSVDASHRRLLTLLRL
WVIMDSVMVYTESCKDRNVAHHTLIARPFRDDVKAKRWLSRQLLEAVPPP
PETAYWYESSPAAAALRRFMNVVYASFGNGVAFSGVSNAVSPPQSPWRWR
LLGVPVTAASFLYYAFRPGIASRDACASMSPAPIELLQQAWTSAHNPLTE
WLALRLARRRGLAWQRRVRVAGVSCYLLSQSDPGLGPGAARPLLFFVHGG
GFVAHLFLADMPALVAWTLALGPRAVLLIPEYTLVPHARFPRPTQELLAV
YKAVREGGREGLGFVPAWVALAGESAGGNLAGSLCVALAGAVVEREEGGQ
GGRKGDRRGGAVGGERPKGARALGLCETHPHLVSVEPLPSLGGGSDLDGP
TGSKLERREEEVGQAQASHAASLLLNLPPARGGGEGMSHTSSEAGSLQSC
SSCSSSDTEEEKGGRG back to topmRNA from alignment at CM002464.1:6557..8929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4664 ID=rna4664|Name=rna4664|organism=Nannochloropsis gaditana|type=mRNA|length=2373bp|location=Sequence derived from alignment at CM002464.1:6557..8929+ (Nannochloropsis gaditana)
ACGCTTGTTCAAATTATTGCATTAAATAAATAGATCCGACAGCTCCAGCA
CGAAACATACAAACCGTGTGTGACAGAAGCCCCTGTTTTCTTGTCGCCGT
GGGCTGAGACCTCGGCGACATTCGGAGCACAGGTATCTTGATCTTTAATG
ACCGTGACACGTTCCAGTGGGAGGCACACCCCGCTGGGAAGACACGACCA
CGCACCGCTCCGTACGTAAGTTGTGAATAAATCCTTTCGTCGTAGGCCTG
TTTGAAAGTGCAACACTTATCTCTGCCAATTTGGGGGCATGGGTATACTT
TCTCGCCCGTCCCAGACGTCAAGTTGAAGCCCGTGACTAGGGCACGCAGG
GGGATGTCAACGCCCTGCATACTTAATAACATACGGGTACATTTGAGAAA
CCGCATAAGTTGAAATTCATAGATTGCCCAAGGAAAATTTATCAGATGAG
TTGAAGCCGATTCTTTACCATTATGCCCGCATTATTCCTTTTTTTAGGTG
TTCCATCTCTGTGAGGAGGGTCACcatgccgcccctcccaccgcaccctc
caccagccaATCTCACCCTTCAAGCGTTGGAAGAGACGTCAACACTGCTC
CATGAGGCTATGCATTTGACCAAATCCATGGGGGGGAGTAGAAGCCCGGT
GCCCCTCCATGAAACCTCGCTGACACTCGCAGCCCTGGACCTCTCGCTTA
CTTTCCGAGTCCACAAACTGATTccaggagtggaggagatgagcaACGAT
CCAAATAAGGTCACATATCACTGTCTACAACAAGCAGTCCAGGCGTTAAA
GCAAGCGGGAGGTCCCACGAATCACCCGCATGGCGGGTATGGGGGGGCTG
ACTCCATTCTTCTCTACCTCTCGCACGCCCTGGCCACCCTCATCAAATGC
TTGAAGGGACTGCAGCAAGTAACGCGCGTGAAAGAAGTCTTCCAAACGCG
CCTGTACTTCGCGACGCTGGTGGGTCTGGCTTGGTTCTGCAAGAAGAAGC
GACAGGGTCGGCGCCTGGTCTTGTGGGTGGTTGGGATGGGTTACCTGGCC
CGCAAGCTCCACTTCCTGAGCCTGCAGCGAAGTGTGGACGCCTCCCACCG
GCGGCTCTTGACCCTGCTGCGGCTGTGGGTGATCATGGACAGCGTCATGG
TCTACACGGAGAGCTGCAAGGACCGGAACGTGGCGCACCACACCCTGATC
GCCCGCCCTTTCCGGGACGACGTGAAGGCCAAGCGGTGGCTGTCCCGGCA
GCTCCTGGaggccgtgccccccccgcccgagaCCGCCTACTGGTACGAGT
CAAGCCCCGCGGCGGCCGCCCTGCGTCGGTTCATGAACGTGGTGTACGCC
TCCTTTGGGAACGGGGTCGCGTTCAGCGGGGTGAGCAACGcggtctcccc
cccccagagCCCGTGGCGCTGGCGCCTGCTGGGGGTTCCCgtcacggccg
cctccttcctctactACGCCTTCCGGCCCGGCATTGCCTCCCGCGACGCC
TGCGCCAGCATGAGCCCCGCCCCCATcgaactcctccagcaggcCTGGAC
GTCGGCGCACAACCCCCTGACCGAGTGGCTCGCCCTTCGCCTGGCGCGAC
GCCGGGGCCTGGCCTGGCAGCGTCGCGTGCGGGTGGCGGGCGTCTCCtgc
tacctcctctcccagagCGACCCCGGCTTGGGCCCCGGGGCGGCCcgacc
cctccttttcttcgtgCACGGCGGGGGGTTCGTAGCCCACCTCTTTCTGG
CCGATATGCCCGCCCTGGTGGCTTGGACGCTCGCCCTGGGCCCGCGCGCC
GTTCTCCTGATCCCCGAGTACACCCTGGTTCCGCATGCCCGCTTCCCGCG
GCCTACGCAGGAGCTCCTGGCCGTCTACAAggcggtgcgggagggaggga
gggagggactgggcTTCGTCCCGGCCTGGGTGGCGCTCGCGGGGGAGTCC
GCGGGCGGGAACTTGGCGGGTTCCCTGTGCGTGGCACTGGccggggcggt
ggtggagagggaggaaggggggcagggaggaaggaagggggaccggaggg
gaggggccgtggggggggagaggccgaagggggccagggccttgggcCTG
TGCGAGACGCATCCGCACTTGGTCTCCGTGGAGCCGCTCCCCTCtttggg
gggaggaagcgacctCGACGGTCCGACCGGGTCCAAGCtggagcggaggg
aggaggaggtcgggcagGCGCaggcctcccacgccgcctccctcctcctc
aacctgCCGCCGgcccggggcgggggggagggcatgagCCACACGTCGTC
AGAAGCCGGGTCTCTCCAGTCGTGctcctcctgttcctcctccgacacgg
aggaggagaagggggggagggga back to topCoding sequence (CDS) from alignment at CM002464.1:6557..8929+ >rna4664 ID=rna4664|Name=rna4664|organism=Nannochloropsis gaditana|type=CDS|length=1848bp|location=Sequence derived from alignment at CM002464.1:6557..8929+ (Nannochloropsis gaditana)
atgccgcccctcccaccgcaccctccaccagccaATCTCACCCTTCAAGC
GTTGGAAGAGACGTCAACACTGCTCCATGAGGCTATGCATTTGACCAAAT
CCATGGGGGGGAGTAGAAGCCCGGTGCCCCTCCATGAAACCTCGCTGACA
CTCGCAGCCCTGGACCTCTCGCTTACTTTCCGAGTCCACAAACTGATTcc
aggagtggaggagatgagcaACGATCCAAATAAGGTCACATATCACTGTC
TACAACAAGCAGTCCAGGCGTTAAAGCAAGCGGGAGGTCCCACGAATCAC
CCGCATGGCGGGTATGGGGGGGCTGACTCCATTCTTCTCTACCTCTCGCA
CGCCCTGGCCACCCTCATCAAATGCTTGAAGGGACTGCAGCAAGTAACGC
GCGTGAAAGAAGTCTTCCAAACGCGCCTGTACTTCGCGACGCTGGTGGGT
CTGGCTTGGTTCTGCAAGAAGAAGCGACAGGGTCGGCGCCTGGTCTTGTG
GGTGGTTGGGATGGGTTACCTGGCCCGCAAGCTCCACTTCCTGAGCCTGC
AGCGAAGTGTGGACGCCTCCCACCGGCGGCTCTTGACCCTGCTGCGGCTG
TGGGTGATCATGGACAGCGTCATGGTCTACACGGAGAGCTGCAAGGACCG
GAACGTGGCGCACCACACCCTGATCGCCCGCCCTTTCCGGGACGACGTGA
AGGCCAAGCGGTGGCTGTCCCGGCAGCTCCTGGaggccgtgccccccccg
cccgagaCCGCCTACTGGTACGAGTCAAGCCCCGCGGCGGCCGCCCTGCG
TCGGTTCATGAACGTGGTGTACGCCTCCTTTGGGAACGGGGTCGCGTTCA
GCGGGGTGAGCAACGcggtctcccccccccagagCCCGTGGCGCTGGCGC
CTGCTGGGGGTTCCCgtcacggccgcctccttcctctactACGCCTTCCG
GCCCGGCATTGCCTCCCGCGACGCCTGCGCCAGCATGAGCCCCGCCCCCA
TcgaactcctccagcaggcCTGGACGTCGGCGCACAACCCCCTGACCGAG
TGGCTCGCCCTTCGCCTGGCGCGACGCCGGGGCCTGGCCTGGCAGCGTCG
CGTGCGGGTGGCGGGCGTCTCCtgctacctcctctcccagagCGACCCCG
GCTTGGGCCCCGGGGCGGCCcgacccctccttttcttcgtgCACGGCGGG
GGGTTCGTAGCCCACCTCTTTCTGGCCGATATGCCCGCCCTGGTGGCTTG
GACGCTCGCCCTGGGCCCGCGCGCCGTTCTCCTGATCCCCGAGTACACCC
TGGTTCCGCATGCCCGCTTCCCGCGGCCTACGCAGGAGCTCCTGGCCGTC
TACAAggcggtgcgggagggagggagggagggactgggcTTCGTCCCGGC
CTGGGTGGCGCTCGCGGGGGAGTCCGCGGGCGGGAACTTGGCGGGTTCCC
TGTGCGTGGCACTGGccggggcggtggtggagagggaggaaggggggcag
ggaggaaggaagggggaccggaggggaggggccgtggggggggagaggcc
gaagggggccagggccttgggcCTGTGCGAGACGCATCCGCACTTGGTCT
CCGTGGAGCCGCTCCCCTCtttggggggaggaagcgacctCGACGGTCCG
ACCGGGTCCAAGCtggagcggagggaggaggaggtcgggcagGCGCaggc
ctcccacgccgcctccctcctcctcaacctgCCGCCGgcccggggcgggg
gggagggcatgagCCACACGTCGTCAGAAGCCGGGTCTCTCCAGTCGTGc
tcctcctgttcctcctccgacacggaggaggagaagggggggagggga back to top
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