rna4659, rna4659 (mRNA) Nannochloropsis gaditana

Overview
Namerna4659
Unique Namerna4659
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length294
Alignment locationCM002463.1:1161395..1162725 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100629g4.2830.mrna
Orig protein idgnl|cribi|Naga_100629g4.2830
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1161395..1162725 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100629g4gene4496Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4659rna4659-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26026.1cds4647Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4659 ID=rna4659|Name=rna4659|organism=Nannochloropsis gaditana|type=mRNA|length=294bp
ATGTTGCCACAGTGGATCCCTTCTGACGTGATGAAGGGCTGGGCAGTTCA
TTTCCCCTTCGCTCATAAAGCTATGGTCGACTATGTTAGCCCAGAATCGC
TTCCTAATAAATGTATTCGGGCTCATTCAGGTCTTGCGCGCTTGACGCGA
CCCTGGAACAAGGAAACACGCGCCTATGTCCGAAAGACCGGTATCCAGAC
ACACCGCCATGGAATTCAAGGCATGACAAAAGATTGTAAAGTGGTCGAAC
TTATTGCTGGATGGACTCGTAAGATGATTTTTAGACGAATTTAG
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protein sequence of rna4659

>rna4659-protein ID=rna4659-protein|Name=rna4659|organism=Nannochloropsis gaditana|type=polypeptide|length=304bp
MRSHQAYFLVALLAFAGSPTAVSQECPRLNLKAQVRPTAKRGILAGKGKG
MITVKLNSKDPVDDVEFQLNLPNGLSVERAVMRPSTKPFTPPQIVQNPDG
TTAIYWLGIDFTKPKGGKRRFRVKVKADECAPETLTIDAFAYLVNATAAS
CITSTNSAILSVRYPKHKNAATCAPTPAPSVNPAQPFVLFREGQRCSEAG
RLAPFEDRRLSLSSGHGGNGPAQRHSGDRDLQSIDSPEACYAYCSLNAGE
ETPFFFNWNTATSQCFCCGSVSPTIREVVIEADDQVSRWSCDVIPSLPWV
LLTN
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mRNA from alignment at CM002463.1:1161395..1162725+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4659 ID=rna4659|Name=rna4659|organism=Nannochloropsis gaditana|type=mRNA|length=1331bp|location=Sequence derived from alignment at CM002463.1:1161395..1162725+ (Nannochloropsis gaditana)
ATGAGATCTCATCAAGCGTATTTCTTAGTTGCCCTCCTGGCCTTTGCAGG
CAGTCCCACCGCTGTCTCTCAAGAATGTCCGCGGCTTAACCTCAAAGCCC
AAGTACGGCCGACTGCGAAGCGCGGAATCCTGGCTGGTAAGGGCAAGGGC
ATGATTACTGTCAAGCTCAATAGCAAAGATCCCGTCGACGATGTGGAGTT
CCAACTGAATTTGCCCAATGGCTTATCGGTAGAGCGAGCAGTGATGCGTC
CGTCCACAAAGCCCTTTACGCCCCCACAAATTGTTCAGAATCCGGATGGA
ACGACTGCTATTTACTGGCTCGGCATCGATTTTACCAAACCTAAGGGGGG
AAAACGACGCTTTCGCGTCAAGGTAAAGGCTGACGAGTGTGCTCCAGAGA
CGTTGACAATAGATGCTTTCGCTTATCTAGTGAATGCTACAGCGGCCTCG
TGCATCACGTCGACCAACTCCGCAATACTAAGCGTGCGATACCCAAAACA
CAAAAATGCGGCGACTTGCGCGCCGACACCCGCTCCCTCTGTCAATCCTG
CGCAGCCTTTCGTGCTCTTTCGTGAGGGGCAGCGATGCTCCGAGGCGGGG
CGCCTGGCCCCTTTCGAGGACCGTCGTCTGTCGCTGTCCTCGGGACATGG
AGGAAACGGCCCAGCTCAGCGACATTCTGGAGATCGAGACCTGCAATCCA
TCGATAGCCCGGAGGCTTGCTACGCCTATTGCTCGCTGAACGCGGGAGAA
GAAacgcccttcttcttcaactgGAATACCGCAACAAGTCAATGCTTCTG
CTGCGGCTCAGTGTGCACGCCCTTCATCTTCGATCCGGATTACAATGTAT
ACGAGGTTCTCTTGCCCACGACTCCAGTGCCTACGGCTGTGCCTACCAGC
GCTGTAGTCCCAACGCCCGCTCCATCCGTTACTGGATGCGAGCCATTTAT
CCCTGACCCAGAAGAGGGATTCACATCTTATTTGTGCGGCGCCTATAGAG
CCTGTATCGGGGTTCTAGTTGCGATGGAGGGAATTCCAGATTTCACGAAC
TGCGCGCTAACGTGCAAACGATTGGGAGCGTTTTCCCTCTCAACTTACAA
TAGTTTGACTGAAAGCTGTCGTTGTAGCTTCACGGACGGTCCCAATGTTA
TGACTCCCTCTGAAAACGACATTCTTGTCGCACTCGAACCTGAATTCAAC
CCTCCTGCTGTTTTGGAGGAGTGTCCAGAAGTCCGACCATAAGGGAGGTC
GTCATCGAAGCAGATGACCAAGTAAGCCGATGGTCATGCGACGTAATTCC
GTCTCTGCCATGGGTGCTTCTTACCAACTAA
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Coding sequence (CDS) from alignment at CM002463.1:1161395..1162725+

>rna4659 ID=rna4659|Name=rna4659|organism=Nannochloropsis gaditana|type=CDS|length=1830bp|location=Sequence derived from alignment at CM002463.1:1161395..1162725+ (Nannochloropsis gaditana)
ATGAGATCTCATCAAGCGTATTTCTTAGTTGCCCTCCTGGCCTTTGCAGG
CAGTCCCACCGCTGTCTCTCAAGAATGTCCGCGGCTTAACCTCAAAGCCC
AAGTACGGCCGACTGCGAAGCGCGGAATCCTGGCTGGTAAGGGCAAGGGC
ATGATTACTGTCAAGCTCAATAGCAAAGATCCCGTCGACGATGTGGAGTT
CCAACTGAATTTGCCCAATGGCTTATCGGTAGAGCGAGCAGTGATGCGTC
CGTCCACAAAGCCCTTTACGCCCCCACAAATTGTTCAGAATCCGGATGGA
ACGACTGCTATTTACTGGCTCGGCATCGATTTTACCAAACCTAAGGGGGG
AAAACGACGCTTTCGCGTCAAGGTAAAGGCTGACGAGTGTGCTCCAGAGA
CGTTGACAATAGATGCTTTCGCTTATCTAGTGAATGCTACAGCGGCCTCG
TGCATCACGTCGACCAACTCCGCAATACTAAGCGTGCGATACCCAAAACA
CAAAAATGCGGCGACTTGCGCGCCGACACCCGCTCCCTCTGTCAATCCTG
CGCAGCCTTTCGTGCTCTTTCGTGAGGGGCAGCGATGCTCCGAGGCGGGG
CGCCTGGCCCCTTTCGAGGACCGTCGTCTGTCGCTGTCCTCGGGACATGG
AGGAAACGGCCCAGCTCAGCGACATTCTGGAGATCGAGACCTGCAATCCA
TCGATAGCCCGGAGGCTTGCTACGCCTATTGCTCGCTGAACGCGGGAGAA
GAAacgcccttcttcttcaactgGAATACCGCAACAAGTCAATGCTTCTG
CTGCGGCTCAGTAAGTCCGACCATAAGGGAGGTCGTCATCGAAGCAGATG
ACCAAGTAAGCCGATGGTCATGCGACGTAATTCCGTCTCTGCCATGGGTG
CTTCTTACCAACTAAATGAGATCTCATCAAGCGTATTTCTTAGTTGCCCT
CCTGGCCTTTGCAGGCAGTCCCACCGCTGTCTCTCAAGAATGTCCGCGGC
TTAACCTCAAAGCCCAAGTACGGCCGACTGCGAAGCGCGGAATCCTGGCT
GGTAAGGGCAAGGGCATGATTACTGTCAAGCTCAATAGCAAAGATCCCGT
CGACGATGTGGAGTTCCAACTGAATTTGCCCAATGGCTTATCGGTAGAGC
GAGCAGTGATGCGTCCGTCCACAAAGCCCTTTACGCCCCCACAAATTGTT
CAGAATCCGGATGGAACGACTGCTATTTACTGGCTCGGCATCGATTTTAC
CAAACCTAAGGGGGGAAAACGACGCTTTCGCGTCAAGGTAAAGGCTGACG
AGTGTGCTCCAGAGACGTTGACAATAGATGCTTTCGCTTATCTAGTGAAT
GCTACAGCGGCCTCGTGCATCACGTCGACCAACTCCGCAATACTAAGCGT
GCGATACCCAAAACACAAAAATGCGGCGACTTGCGCGCCGACACCCGCTC
CCTCTGTCAATCCTGCGCAGCCTTTCGTGCTCTTTCGTGAGGGGCAGCGA
TGCTCCGAGGCGGGGCGCCTGGCCCCTTTCGAGGACCGTCGTCTGTCGCT
GTCCTCGGGACATGGAGGAAACGGCCCAGCTCAGCGACATTCTGGAGATC
GAGACCTGCAATCCATCGATAGCCCGGAGGCTTGCTACGCCTATTGCTCG
CTGAACGCGGGAGAAGAAacgcccttcttcttcaactgGAATACCGCAAC
AAGTCAATGCTTCTGCTGCGGCTCAGTAAGTCCGACCATAAGGGAGGTCG
TCATCGAAGCAGATGACCAAGTAAGCCGATGGTCATGCGACGTAATTCCG
TCTCTGCCATGGGTGCTTCTTACCAACTAA
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Synonyms
Publications