rna4658, rna4658 (mRNA) Nannochloropsis gaditana

Overview
Namerna4658
Unique Namerna4658
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1037
Alignment locationCM002463.1:1157761..1158054 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100629g2.2833.mrna
Orig protein idgnl|cribi|Naga_100629g2.2833
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1157761..1158054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100629g2gene4495Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4658rna4658-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26029.1cds4646Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4658 ID=rna4658|Name=rna4658|organism=Nannochloropsis gaditana|type=mRNA|length=1037bp
TTGCTTGTTTTAAAGATCTGAGAGCTGGACATACGCATTTCCTTTCCTTT
TAACCTCCTCTCCCCCCCTCCTCTCCCATCCCTAAACTTGCTCTTTCGGA
AGGCATGAGGAAAGCAAAACCCGGAATGACGCCCAAAGTTCCTACTTCAT
CCTCTTATATTGCATCCCGCCCCTCGTCCACGGTCACGTCCTCCTCCTCT
GCCTCACCACCAACCGACTCTCAGATTAGCAGCACCATTCTAGCGCTCAC
GACCAGGCGCGGTCCCTGTAGAACAATTTGTCCATCCGAAGTCCCTCGCG
TCCTGTGCCCCTCAAATTGGCGAGCATACATGCCTCGTGTGCGAGCGGTG
GCCATTCGCTTGGCCAAGGAGGGCCTCATTGACATTACACAGAGAGGACA
AGTGGTCACAGTGGAGAAGGAGGGGGACATACGAGGTCCCATTCGATTGC
GGACAATTTCCGATGGGAATGTTTGCACACAGAGCCAAACCTCTTCGAAA
AGCTCTCCAGCGGCAGGGCCGGAAGCTGTCTCTTCCTAAGTCGTGCACAT
AGTCGGAGAAATCATTTGCTTCAGAAACAGACAGTAACGTGATGCAAGTT
AGAAACAAAATAGCATTATTCTTTCTAAATTCGTCTAAAAATCATCTTAC
GAGTCCATCCAGCAATAAGTTCGACCACTTTACAATCTTTTGTCATGCCT
TGAATTCCATGGCGGTGTGTCTGGATACCGGTCTTTCGGACATAGGCGCG
TGTTTCCTTGTTCCAGGGTCGCGTCAAGCGCGCAAGACCTGAATGAGCCC
GAATACATTTATTAGGAAGCGATTCTGGGCTAACATAGTCGACCATAGCT
TTATGAGCGAAGGGGAAATGAACTGCCCAGCCCTTCATCACGTCAGAAGG
GATCCACTGTGGCAACATCGCTAGCCTACGTCCGAGAAAAATCCGAATTG
GAAAGAGACTTGCCCGTGCCTATCGCTCCCAAGCCCCTGAGTCCCCATCC
CCTCTCGCCCCAGCTTGCCCGTGTTATCTTTCCCCCC
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protein sequence of rna4658

>rna4658-protein ID=rna4658-protein|Name=rna4658|organism=Nannochloropsis gaditana|type=polypeptide|length=97bp
MLPQWIPSDVMKGWAVHFPFAHKAMVDYVSPESLPNKCIRAHSGLARLTR
PWNKETRAYVRKTGIQTHRHGIQGMTKDCKVVELIAGWTRKMIFRRI
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mRNA from alignment at CM002463.1:1157761..1158054+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4658 ID=rna4658|Name=rna4658|organism=Nannochloropsis gaditana|type=mRNA|length=294bp|location=Sequence derived from alignment at CM002463.1:1157761..1158054+ (Nannochloropsis gaditana)
ATGTTGCCACAGTGGATCCCTTCTGACGTGATGAAGGGCTGGGCAGTTCA
TTTCCCCTTCGCTCATAAAGCTATGGTCGACTATGTTAGCCCAGAATCGC
TTCCTAATAAATGTATTCGGGCTCATTCAGGTCTTGCGCGCTTGACGCGA
CCCTGGAACAAGGAAACACGCGCCTATGTCCGAAAGACCGGTATCCAGAC
ACACCGCCATGGAATTCAAGGCATGACAAAAGATTGTAAAGTGGTCGAAC
TTATTGCTGGATGGACTCGTAAGATGATTTTTAGACGAATTTAG
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Coding sequence (CDS) from alignment at CM002463.1:1157761..1158054+

>rna4658 ID=rna4658|Name=rna4658|organism=Nannochloropsis gaditana|type=CDS|length=294bp|location=Sequence derived from alignment at CM002463.1:1157761..1158054+ (Nannochloropsis gaditana)
ATGTTGCCACAGTGGATCCCTTCTGACGTGATGAAGGGCTGGGCAGTTCA
TTTCCCCTTCGCTCATAAAGCTATGGTCGACTATGTTAGCCCAGAATCGC
TTCCTAATAAATGTATTCGGGCTCATTCAGGTCTTGCGCGCTTGACGCGA
CCCTGGAACAAGGAAACACGCGCCTATGTCCGAAAGACCGGTATCCAGAC
ACACCGCCATGGAATTCAAGGCATGACAAAAGATTGTAAAGTGGTCGAAC
TTATTGCTGGATGGACTCGTAAGATGATTTTTAGACGAATTTAG
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Synonyms
Publications