rna4626, rna4626 (mRNA) Nannochloropsis gaditana

Overview
Namerna4626
Unique Namerna4626
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length423
Alignment locationCM002463.1:1094103..1096046 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101254g2.5801.mrna
Orig protein idgnl|cribi|Naga_101254g2.5801
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1094103..1096046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101254g2gene4462Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26059.1cds4614Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4626rna4626-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4626 ID=rna4626|Name=rna4626|organism=Nannochloropsis gaditana|type=mRNA|length=423bp
ATGATGACGCTGCACTCACATTTTGTTACCCTCTGCCCACATACAGAGAC
CCATTTCACCCCGAAAAACCCTGTCGACATGACCTTGCGATGGTGTCCCA
CCCACACTCATTCGGTGGCGGTGGTGGTGGTGTTTTTGTTGTTTGTGGTG
GGTTTGCGGGCGCAAATTACCATTCCGCTGACGTACAAGTCTCAACCTCC
AGCATCATCGACACCTGCCTCCTTGGCGGATAAAAAAATGCGCTACAATT
TCATCAAAACCAGCACAGACGCAGGCCTTCTCGGGGGCATATGGTCGAGC
ATGGTGGTGGAGGAGCAGCTTGACTATGTGGCCATCCTCGATCCCTTCAC
CAATGGCGTGAAGCAAGCCTCGGCCTCCATCGCTCTTCGGAGGGAATCAG
GTAGCACAGGAAGGAGGGAGTGA
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protein sequence of rna4626

>rna4626-protein ID=rna4626-protein|Name=rna4626|organism=Nannochloropsis gaditana|type=polypeptide|length=119bp
METGNNEESVSSQKPRPRVTPAMFRHLLIPFLPSPFCTLFFCGSISMMSG
RKGVPQLTHRPSLHSLPPSLPPSSFPTSLIPHPAIDPGHALGALLQNRFR
AADADRPCAKRQYRRREPG
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mRNA from alignment at CM002463.1:1094103..1096046-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4626 ID=rna4626|Name=rna4626|organism=Nannochloropsis gaditana|type=mRNA|length=1944bp|location=Sequence derived from alignment at CM002463.1:1094103..1096046- (Nannochloropsis gaditana)
TCTCTGTTGTACGCTTATGCATGTTCATGCCTCCACATTTGCCCCGAGGG AGAGATGTTGAGACGCTCTGACAAAGACTCTCTTGGCGTCTTGATAATGT TCGAGACAATCGACAAATGCAAAAACTGAGGGACAAAGGAGCAAAAATGT GCCATCTTCCGACTTCATCCGCGGTCCATGTGCCATGCTTGGTTTTTAGT ATGATTTATTTGATACCAGCGGCATTGTTATTGGTTTTTGTGATTATTAT ATAGCCAAGATAAAGAGACATACGAAGGGCAAGGAAAAAGCAAACTACGT ACTACGTATATATCCCTCTTTACGCAAAGTGAACCCCGAAAACTGACTCA TTGCCCACAAAAACTGGCTTGAAAGGTCCGAACAACACGATACGACGCAG TATGGAGGGCGAACAAGCGAAGGGAGAGGGATTAGTTTGGACATAGTGGG TGGCATGTGCTCTTTTTTTTTTCCCCACCGGAGCAGGCAGCTACTCCGCC ACAAGCCCCGTCGATCCTCACAACCACCTTTTCAATCATGAAAAACGTCG TATCCATTTAAATCCTCATCATCCCTCTATGTTTGTATGAACACACGCAC ACATGTCAATTATCGAGTGTCATGGTGGCGGTTTGACGCTTGTAAATATT ATTTTTATAGCCCGATAGGCACCGTAGCCTGCTTCTCATGATGTTCCTAC TTGACGTCGTAGTTGGTTTTTTAATCCTTTTTTTCAAGAAGCCACGCATT TGTGCATGTTTGGGTTTGTTACTGTACGAATTGTGGCTCTGTCGTTTACA TCGTAAAATGAGAGAGCATTTTCGCACCTGACGTCAATTCGATTAGGGTT ATAATAGAGGCGACGGCCTCATTTCCCGTGTGATCAGAGGAGGTTTTGCC TGTAAGGATTGTATTTTGACCCGAAACGCCGCTGTCCAAAGAGCATCGAC TAGCTGATGTAAGAGAATGCTGCACGTTCCGTGGAAGCCAAAAAACTCTG ATTTTTCAGGAGCTCTGGGAATCGATGGAGACAGGCAATAATGAGGAAAG TGTTTCCTCCCAAAAACCTAGGCCGCGCGTCACACCAGCAATGTTTCGTC ACCTCCTTATTCCTTTCCTTCCCTCTCCCTTCTGTACTCTATTTTTCTGT GGCTCGATTAGTATGATGTCGGGACGCAAGGGTGTTCCGCAGCTGACTCA TCGTCCTTCTCTTCACTCCCTCCCTCCCTCCCTCCCTCCCTCTTCCTTCC CTACCTCCCTCATTCCTCACCCAGCCATCGATCCCGGCCATGCGCTTGGA GCTCTTCTTCAAAACCGCTTCCGAGCTGCAGACGCTGATCGCCCTTGTGC AAAGCGCCAATATCGGCGCCGTGAACCTGGTTAACAAAGCCAAGACGGAC CCCCTCTTGCACTATGTCCGCACGTTGAAGGTACAGAGAGGGGGAGGGAA ATACCCATATATATATCCATATATTATGTCCGCACGTTGGAGGTACAGAG AGGGGAAGGAAAATGCCCTTATGTCCGCACGTTGAAGGTACAGAGAGGGG GAGGGAAATACCTTGGGGGAAAACCTTGATGAAAGTGTGGAATGACAAGG AGAAGGACGGGTACCATGGGCTTGCGTTTACGGGGAGGACCTGCGTGGCC TCAGTCTATCCTCAATCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCTCGCCGTCCTCGGACCCGTCCTCGCAATTACAGCACGCTTTCCCTT CCTCTCCTTCTTCTCCTTCCTCCCTTTCCTCCTCTTTGGATGTGGTGCCT CATTTCTCCATCAAGTATCAGCACCAGGGGCGTGACACAGAGGCCACCTA CGCCCACGTCAAGGTCCCTCCCTCCTTCCCTCACTCCCTCCCTCCCTCCC TCCTTCCCTCCCTTCCTCCCTCCCTTCCTCCTCCCTCCCTCCTT
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Coding sequence (CDS) from alignment at CM002463.1:1094103..1096046-

>rna4626 ID=rna4626|Name=rna4626|organism=Nannochloropsis gaditana|type=CDS|length=360bp|location=Sequence derived from alignment at CM002463.1:1094103..1096046- (Nannochloropsis gaditana)
ATGGAGACAGGCAATAATGAGGAAAGTGTTTCCTCCCAAAAACCTAGGCC
GCGCGTCACACCAGCAATGTTTCGTCACCTCCTTATTCCTTTCCTTCCCT
CTCCCTTCTGTACTCTATTTTTCTGTGGCTCGATTAGTATGATGTCGGGA
CGCAAGGGTGTTCCGCAGCTGACTCATCGTCCTTCTCTTCACTCCCTCCC
TCCCTCCCTCCCTCCCTCTTCCTTCCCTACCTCCCTCATTCCTCACCCAG
CCATCGATCCCGGCCATGCGCTTGGAGCTCTTCTTCAAAACCGCTTCCGA
GCTGCAGACGCTGATCGCCCTTGTGCAAAGCGCCAATATCGGCGCCGTGA
ACCTGGTTAA
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Synonyms
Publications