rna4615, rna4615 (mRNA) Nannochloropsis gaditana

Overview
Namerna4615
Unique Namerna4615
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length994
Alignment locationCM002463.1:1052797..1053631 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101801g1.2488.mrna
Orig protein idgnl|cribi|Naga_101801g1.2488
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1052797..1053631 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101801g1gene4451Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26070.1cds4603Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4615rna4615-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4615 ID=rna4615|Name=rna4615|organism=Nannochloropsis gaditana|type=mRNA|length=994bp
TCTCGGAGCGTGTCGCGGTTTTGAGTGAGGAAATCCTGTCCTTGAATATG
TTGGAGCTAGGGCAGCTCCTCAAGGTTTTGAAGCACCGGCTGGGCCTTTC
GGATGCGGACCTGCGGGGTACGGTCATGGTGGCGCCAGGTGCTGGGGGAG
GTAGCGACGGAGGGGCAGCGGCAGGAGCTGCAGAGGAGGAGAAGCAGGAG
GAGAAGGACGCTTTCGATGTCAAACTTGTTTCATTCGAGGATAAGAGCAA
GATCAAGGTTATCAAAGAGGTCCGTACCATCAGTGGCTTGGGCCTGAAGG
AAGCCAAAGAGCTTGTGGAAGGGGCGCCGAAGGTGATCAAGAAGGACGTG
AAGAAGGAGGAGGCGGAAGCCCTCCTTAAGAAACTGCAGGACGTAGGCGC
GAAGGTGGAGTTGGTGTAGGAAGGAGGGGCGATAGGGAGGAGAGGGAGAA
GTGATAATGTGTCACGGTGATAAATGGTGCATAAAATAGAGGAAAAGCGA
TGGCGCTGGAAGGAAAGCGGGGCCGGAGGGGGGGAGGCATTAGGAAGAGT
GACAGGGGACGGTTGGAGATGGAGAAGGGTGATGCCGTCAAGGACGGGGA
GGGGGGGAGGGGTCATGTGGAAAGGATGGGAGAAGGGGAGAAGACGAGAG
GGGGGATGGAACGGAGGGTCAGCAGTGTGGGAAGGGTGGATCTAGGAGGC
GATATGGAGGGAATGGGAAGGCGCTGTCACGGCGGTTCCTGCGTGGGAGG
GGATTCAGCCGGCGGAACGTCCGGTGGCAGGAGGATGGTATTGGATGCCA
GCGGAAAGGAGCACGGTACAAAGAGTGTGGGGCGGGGAATGTCGAGTCAG
GATCGTTTCTAAGGGCGCCCATCGTCGGAAACATGGAAAGAAGGGAATCA
TGCCTGACAGCGTTGTTCTTTGTCGTTCTTTGCCTCTCTTCATCGTTCCT
CTTGGTCCCCTGCCAAAGAGAACATCCTCATTGAAGGGTGCCGG
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protein sequence of rna4615

>rna4615-protein ID=rna4615-protein|Name=rna4615|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MTDTTAMITRGAGVYYKASAAFIRRGRDSLRGTISSTNSPAGSIDKTHKL
PSHSQTHGLAGLQTLRCSSSGSTHPEILHAARSSSNNNIRRTDVSLSPVR
PVHIVACPRRLPLGPQTALTARQSRRLPLGPQAGQGPVNQKATIRCFSNE
PVLTNKGEAAPPPASIPPPLEEPGDGGENEGKGGRQETRGGGEAKRGNRR
VEG
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mRNA from alignment at CM002463.1:1052797..1053631-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4615 ID=rna4615|Name=rna4615|organism=Nannochloropsis gaditana|type=mRNA|length=835bp|location=Sequence derived from alignment at CM002463.1:1052797..1053631- (Nannochloropsis gaditana)
GTGTCGGGGGGAAAGCACCGAGACTGGGACGTAGAGATGCTGGCAGCTTG
ATGGGAGAGATACTTTGTGCGGTGGGGGAATTTGTGTGTGTGTCGATGCG
TGAGTTTGGAGTGGGAACTTTATCCTGTATCTCACGAGTAAGATGTCTGA
TGATGTCGTTAATGAGACTTTGTAAATTCTGAACACCTCCGTCATTCGAC
CACACACGCCTCCACGCCTCATTTCATGACAGACACCACGGCAATGATCA
CACGAGGAGCCGGGGTATATTATAAGGCTTCGGCGGCTTTCATAAGGAGA
GGAAGGGACAGTCTAAGGGGCACGATCAGCAGCACGAACAGCCCCGCAGG
CAGTATAGATAAAACACATAAACTCCCGTCACATTCACAAACACATGGGC
TCGCCGGCCTCCAGACCCTAAGATGCAGCAGCAGCGGAAGCACCCACCCC
GAAATCCTGCACGCTGCCCGCAGCAGCAGCAACAACAACATCCGCCGCAC
GGACGTTTCCCTGAGCCCTGTGCGTCCCGTGCATATCGTCGCGTGCCCAA
GGCGCCTGCCGCTTGGGCCACAGACGGCCCTGACAGCGAGGCAGTCAAGG
CGCCTGCCGCTTGGGCCACAGGCGGGGCAGGGCCCGGTGAACCAGAAAGC
CACAATCCGGTGTTTCTCGAACGAGCCCGTGCTGACGAATAAAGGAGAAG
CGGCGCCGCCACCGGCATCCATCCCGCCGCCGTTGGAGGAGCCTGGGGAC
GGAGGTGAGAACGAGGGGAAGGGAGGGAGACAAGAGACAAGGGGAGGAGG
GGAGGCGAAGAGGGGGAACAGGAGGGTTGAAGGTT
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Coding sequence (CDS) from alignment at CM002463.1:1052797..1053631-

>rna4615 ID=rna4615|Name=rna4615|organism=Nannochloropsis gaditana|type=CDS|length=610bp|location=Sequence derived from alignment at CM002463.1:1052797..1053631- (Nannochloropsis gaditana)
ATGACAGACACCACGGCAATGATCACACGAGGAGCCGGGGTATATTATAA
GGCTTCGGCGGCTTTCATAAGGAGAGGAAGGGACAGTCTAAGGGGCACGA
TCAGCAGCACGAACAGCCCCGCAGGCAGTATAGATAAAACACATAAACTC
CCGTCACATTCACAAACACATGGGCTCGCCGGCCTCCAGACCCTAAGATG
CAGCAGCAGCGGAAGCACCCACCCCGAAATCCTGCACGCTGCCCGCAGCA
GCAGCAACAACAACATCCGCCGCACGGACGTTTCCCTGAGCCCTGTGCGT
CCCGTGCATATCGTCGCGTGCCCAAGGCGCCTGCCGCTTGGGCCACAGAC
GGCCCTGACAGCGAGGCAGTCAAGGCGCCTGCCGCTTGGGCCACAGGCGG
GGCAGGGCCCGGTGAACCAGAAAGCCACAATCCGGTGTTTCTCGAACGAG
CCCGTGCTGACGAATAAAGGAGAAGCGGCGCCGCCACCGGCATCCATCCC
GCCGCCGTTGGAGGAGCCTGGGGACGGAGGTGAGAACGAGGGGAAGGGAG
GGAGACAAGAGACAAGGGGAGGAGGGGAGGCGAAGAGGGGGAACAGGAGG
GTTGAAGGTT
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Synonyms
Publications