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Properties
| Property Name | Value |
|---|
| Product | Biotin/lipoate A/B protein ligase |
| Orig transcript id | gnl|cribi|Naga_100014g80.9276.mrna |
| Orig protein id | gnl|cribi|Naga_100014g80.9276 |
| Gene | BPL_LplA_LipB |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:1007243..1008733 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4601 ID=rna4601|Name=rna4601|organism=Nannochloropsis gaditana|type=mRNA|length=2154bp
GGTCCATAATACTTCTTTTGTGAATTTTTCGAAACAAAAGGACCTCTGAA
TATTCAATTCGCCAGACCACTAAGTCTTCCTCGTAGGATCCAACCCCACC
TGCGGAGGCGTGCTCGACCTCCCGGCGGGCAGACTCGACTCGGAGGAGGA
AGCTCGCACTGCAACTACCTCTTGATGTCGACTTATTCGCACGCCTTAAT
ACCTACATACAGGTAACGAGCCATGCCACGGCATCTGATCCTCAGCATAT
TTTTAGCTGCCGTTGCGTCTACCGCGACAACACATGCCTTTTTGGCGCGC
GGGCGGTGCAAGCCTCCGGGCCAAGGCCGTAGAGGGCGGATCGAGGCTGC
GGGAGTATCTCATGGCATTGGGGCGGGCAAGCTTGTCTGCGGGCGCACTC
GTATCACTCTGCAAAGAAGAGGTGGAATCACAATGCAGTTGAAGCCCTCC
ACCGCTCCACCGTTCACAACGAAGGAGGAGCAAGAGAAGGACAAGGGCAT
TAAGGTGCGAGATGACCAGACATCCCCCGTTTTCCGTCATGCTTCCACTT
CCTCACGGCCCCACTCGTGAGCTCGCGAGATGCTTCGTCGGCGCTAATCT
GACCACACTGACCATTTTACGGACCGCATCCCTCCAGGTATCCCCCTCTG
CCTGGAAATGGCCTAAGTCCTGGCCCTACAACGACGACTACTTTTCTCGC
AGACAGGAGGACAGCGTCCCGCTCAATGGGACTCCAAATCTCTCCCCCAT
CTACGATAACAAGGCAGCAAATGCCTTGGCCGAGCACTACCTGCGCTTCC
TTCCCCCCTCCGGGTCTCTTCTTGAAATCGGCGCCTCGGCGCACTCTTAT
CTCCCTCCCTCCCTCTCCCCCTCCCGCTTCGTCGGTGTGGGCGTCAACGA
GGAGGAAATGGCGGCCAATCCTGCCTTGACGGACCGGATCGTCCAAGACT
TGAACGCAGACTTCTCTCTCCCGGCGTCTGCCGTCCCTCCGGACAGCTTC
GACGCCGTGCTCATCGCCAACACGATGGAGTTTCTGGTCAAGCCCCGGGA
GGTGCTGAGGGAGGCTTGGCAGGCCCTCAAACCGGGGGGACACTTGATTA
TATCCTTTGCGAGCAAGAATCGCGTGAACGAGGAGCGGCAGATTAAGATC
TGGGGCAACATGAACGACGACCAGCGCATGTGGATCGTGGGCTCCTTCAT
CTACTTCGCCTGCGCGGAGGGCTTCATCGAGCTCAAGGGCTACGACCTAA
GCGAGGGAGACAGCAAGGGCATGATGGCCGGTCTCTCCGGGAAGACCCCC
TTGCACATCATCCAGGCCGTCAAGAACGAGGTCCCGAAGGAGGGCGGGGG
GGAGGAGAATGTGGCGGCGAGGATGAAGGCGGCCCTGTGGACGGTTTCCT
CCATGGGCGCCGAGGACAAGGCCCTGGCCCTGGCGCGCATGTTCCAGGTC
TGGCGGCAGGCGGGGTCGGAGGCTGAGAAGGAGGGCGTTGTGCAAGCTGT
TTCCTCCCTGCCCCGCATCTACGCGGTGCTCCAGGAGATGGGCAACGCTA
TCCCCCTCCAGCTCAAGGCCCTCCTGGCCACGAGGGTGGCAGTGCACTAC
CACGGGACGGAGGAGGAGCTGGAGCAGCTCCGACAGGGCCTGGGGCTCTC
GGAACCCTCGCCCGACTTCTGGGCGCCTCTGGGAAAGATGACGGGGATGA
TGAACGCGGAAGACAAGGTCTTGCTTCTGGCCGAGTGCGTGCCTCTTCAC
GCGGGCAAGGAGGCGGAGAAGCGGGCCTTGGGGGAGCTAGTGCCCACCTT
GGAGAAGGTGATAGCGGTTGTGAAAGAAAAATGTCCGGATTTGAATAAAT
CGGACGCCCAACTGCTAGGGGTTGACCTCTGTCTCACGGACTTCTTGTAC
GTGGCGGAGGAGGAGCGGCGAAGAAGCTTTTTAAGCTGGGTGGGGTCGTT
GAATGAGGCGGACTTGAGGGAGTACCTGAGAGAGCGGCGGAACTTCAAGG
GGGAGGGGGAGGAAATGGAGGAGACAGAGAGAGAAAAGGTAGTTTCCTGA
AAGGGTGGGAGGGATGATCGGGGGACAAGAGGGGGGATTTGACGAAGGAA
GTGAAGTTTAGGGAGGCGACGGAAAGTAAGAAGCCAAAATTCCAAACAAA
TGCC back to topprotein sequence of rna4601 >rna4601-protein ID=rna4601-protein|Name=rna4601|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
MIAGTLVGTMRAGLRRRVATLNIQGLVPYSLAWQLQQKLVAQRIVWQKEE
QSGFDAMLVLEHSPVYTLGRSAKPGDVKFPLVEGTGQGGRGFEVFKTDRG
GQVTWHGPGQIVIYPVVDLTHHKKDLRWYVRGLEEVVLRVLALHGVEGQR
DEKHTGVWVKEQGPEGEELTKVAAIGVSASRWVTCHGLALNVDPDLRAFE
SIVPCGVRDRRVGCLKTLLSPHVAAELTTAQVRYELMEAFEDVFPSMELC
VQEKKDQLKGTVDEMVLEDEEREDYIFVTDGTEQNVHHCQGLLRAFLPEK
KRAGKKMVEKESNFPDKTHQEIL back to topmRNA from alignment at CM002463.1:1007243..1008733+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4601 ID=rna4601|Name=rna4601|organism=Nannochloropsis gaditana|type=mRNA|length=1491bp|location=Sequence derived from alignment at CM002463.1:1007243..1008733+ (Nannochloropsis gaditana)
ATGATAGCAGGGACTTTAGTGGGGACGATGAGAGCTGGACTGCGTCGACG
CGTCGCTACCCTGAACATCCAAGGTAAGCATGTCAAGTTGACGTTGAATG
CGGTTGCTCTCTTCCGTCACATTTTTACAAATTTACCTTCAGGTCTTGTC
CCTTACTCCTTGACATCTAGGTCTTGTTCCTTACTCCTTGGCTTGGCAAC
TGCAGCAGAAATTGGTGGCACAACGCATTGTctggcagaaggaggaacag
TGAGTCCCAAAATGCCCTTATTCGAGGATGTGGATTGCCCTCTCGCTCAT
CACTTCCTATTTCTTTGTAGATCTGGCTTTGACGCCATGTTGGTCCTGGA
GCACTCGCCTGTCTACACATTAGGCCGCTCTGCCAAGCCCGGGGATGTTA
AATTTCCTCTGGTGGAGGGTACTggccagggcgggcggggattTGAGGTG
CGTCGTGAACGAGGAGTACACAGACAGAGGCGTGCAACTTCCATGCATTG
CATGATAAAGGCGTCTGAGCCGACTAGCGATGTTTCATTTTTTACCTCAG
GTCTTCAAAACGGACCGAGGCGGACAAGTAACTTGGCATGGTCCCGGCCA
GATAGTGATCTACCCAGTGGTGGACCTGACGCACCACAAGAAGGATTTGC
GGTGGTACGTCAGGGGCCTAGAAGAGGTGGTGCTTCGGGTGCTCGCCTTA
cacggggtggagggacagcgggacgagaaacacaCAGGCGTGTGGGTGAA
AGAGCAGGgcccggagggggaggagctgacGAAGGTGGCCGCGATCGGCG
TCTCCGCGAGCCGGTGGGTGACCTGCCACGGCCTAGCCCTGAATGTAGAC
CCAGACCTACGGGCTTTCGAGTCGATTGTGCCGTGTGGCGTGAGAGACCG
TAGAGTCGGGTAAGTACACAGCAGAAAATGTGCCGGGCATCTTGTGGAAT
TGTCCTTCACAGTGGAGCGACGAGGCGAGTCTGTGCTTCCCCTCAGCTTT
CAAACGTCGAGTATAAGTTGCCTTTGCTTTGAAGCGTCGAGTCCAAgctc
cctttgcttctcGCATCCCACACAGGTGCCTCAAAACCCTCCTCTCACCT
CATGTCGCAGCCGAGCTAACGACAGCTCAAGTGCGCTACGAGCTCATGGA
GGCTTTTGAAGATGTTTTCCCGAGCATGGAACTGTGTGTCCAGGAGAAAA
AGGATCAGTTGAAGGGAACGGTGGACGAGATGGTGcttgaggatgaggag
cgagaggaCTATGTGTAGCTTGGTGGATGAACGTGGCTAAAAGGCAATCT
CCACGACAGGAAAAAAGGTTATATAGGAGATTTCCTGCCTGTAGATATTT
GTTACGGACGGAACTGAACAGAATGTTCACCATTGCCAAGGTCTTCTGAG
GGCTTTCTTaccggagaaaaagagagcagggaaaaaaatggttgaaaaag
aaagtaaTTTTCCCGACAAGACACACCAAGAAATATTGTGA back to topCoding sequence (CDS) from alignment at CM002463.1:1007243..1008733+ >rna4601 ID=rna4601|Name=rna4601|organism=Nannochloropsis gaditana|type=CDS|length=5832bp|location=Sequence derived from alignment at CM002463.1:1007243..1008733+ (Nannochloropsis gaditana)
ATGATAGCAGGGACTTTAGTGGGGACGATGAGAGCTGGACTGCGTCGACG
CGTCGCTACCCTGAACATCCAAGGTCTTGTTCCTTACTCCTTGGCTTGGC
AACTGCAGCAGAAATTGGTGGCACAACGCATTGTctggcagaaggaggaa
caATCTGGCTTTGACGCCATGTTGGTCCTGGAGCACTCGCCTGTCTACAC
ATTAGGCCGCTCTGCCAAGCCCGGGGATGTTAAATTTCCTCTGGTGGAGG
GTACTggccagggcgggcggggattTGAGGTCTTCAAAACGGACCGAGGC
GGACAAGTAACTTGGCATGGTCCCGGCCAGATAGTGATCTACCCAGTGGT
GGACCTGACGCACCACAAGAAGGATTTGCGGTGGTACGTCAGGGGCCTAG
AAGAGGTGGTGCTTCGGGTGCTCGCCTTAcacggggtggagggacagcgg
gacgagaaacacaCAGGCGTGTGGGTGAAAGAGCAGGgcccggaggggga
ggagctgacGAAGGTGGCCGCGATCGGCGTCTCCGCGAGCCGGTGGGTGA
CCTGCCACGGCCTAGCCCTGAATGTAGACCCAGACCTACGGGCTTTCGAG
TCGATTGTGCCGTGTGGCGTGAGAGACCGTAGAGTCGGGTGCCTCAAAAC
CCTCCTCTCACCTCATGTCGCAGCCGAGCTAACGACAGCTCAAGTGCGCT
ACGAGCTCATGGAGGCTTTTGAAGATGTTTTCCCGAGCATGGAACTGTGT
GTCCAGGAGAAAAAGGATCAGTTGAAGGGAACGGTGGACGAGATGGTGct
tgaggatgaggagcgagaggaCTATATATTTGTTACGGACGGAACTGAAC
AGAATGTTCACCATTGCCAAGGTCTTCTGAGGGCTTTCTTaccggagaaa
aagagagcagggaaaaaaatggttgaaaaagaaagtaaTTTTCCCGACAA
GACACACCAAGAAATATTGTGAATGATAGCAGGGACTTTAGTGGGGACGA
TGAGAGCTGGACTGCGTCGACGCGTCGCTACCCTGAACATCCAAGGTCTT
GTTCCTTACTCCTTGGCTTGGCAACTGCAGCAGAAATTGGTGGCACAACG
CATTGTctggcagaaggaggaacaATCTGGCTTTGACGCCATGTTGGTCC
TGGAGCACTCGCCTGTCTACACATTAGGCCGCTCTGCCAAGCCCGGGGAT
GTTAAATTTCCTCTGGTGGAGGGTACTggccagggcgggcggggattTGA
GGTCTTCAAAACGGACCGAGGCGGACAAGTAACTTGGCATGGTCCCGGCC
AGATAGTGATCTACCCAGTGGTGGACCTGACGCACCACAAGAAGGATTTG
CGGTGGTACGTCAGGGGCCTAGAAGAGGTGGTGCTTCGGGTGCTCGCCTT
AcacggggtggagggacagcgggacgagaaacacaCAGGCGTGTGGGTGA
AAGAGCAGGgcccggagggggaggagctgacGAAGGTGGCCGCGATCGGC
GTCTCCGCGAGCCGGTGGGTGACCTGCCACGGCCTAGCCCTGAATGTAGA
CCCAGACCTACGGGCTTTCGAGTCGATTGTGCCGTGTGGCGTGAGAGACC
GTAGAGTCGGGTGCCTCAAAACCCTCCTCTCACCTCATGTCGCAGCCGAG
CTAACGACAGCTCAAGTGCGCTACGAGCTCATGGAGGCTTTTGAAGATGT
TTTCCCGAGCATGGAACTGTGTGTCCAGGAGAAAAAGGATCAGTTGAAGG
GAACGGTGGACGAGATGGTGcttgaggatgaggagcgagaggaCTATATA
TTTGTTACGGACGGAACTGAACAGAATGTTCACCATTGCCAAGGTCTTCT
GAGGGCTTTCTTaccggagaaaaagagagcagggaaaaaaatggttgaaa
aagaaagtaaTTTTCCCGACAAGACACACCAAGAAATATTGTGAATGATA
GCAGGGACTTTAGTGGGGACGATGAGAGCTGGACTGCGTCGACGCGTCGC
TACCCTGAACATCCAAGGTCTTGTTCCTTACTCCTTGGCTTGGCAACTGC
AGCAGAAATTGGTGGCACAACGCATTGTctggcagaaggaggaacaATCT
GGCTTTGACGCCATGTTGGTCCTGGAGCACTCGCCTGTCTACACATTAGG
CCGCTCTGCCAAGCCCGGGGATGTTAAATTTCCTCTGGTGGAGGGTACTg
gccagggcgggcggggattTGAGGTCTTCAAAACGGACCGAGGCGGACAA
GTAACTTGGCATGGTCCCGGCCAGATAGTGATCTACCCAGTGGTGGACCT
GACGCACCACAAGAAGGATTTGCGGTGGTACGTCAGGGGCCTAGAAGAGG
TGGTGCTTCGGGTGCTCGCCTTAcacggggtggagggacagcgggacgag
aaacacaCAGGCGTGTGGGTGAAAGAGCAGGgcccggagggggaggagct
gacGAAGGTGGCCGCGATCGGCGTCTCCGCGAGCCGGTGGGTGACCTGCC
ACGGCCTAGCCCTGAATGTAGACCCAGACCTACGGGCTTTCGAGTCGATT
GTGCCGTGTGGCGTGAGAGACCGTAGAGTCGGGTGCCTCAAAACCCTCCT
CTCACCTCATGTCGCAGCCGAGCTAACGACAGCTCAAGTGCGCTACGAGC
TCATGGAGGCTTTTGAAGATGTTTTCCCGAGCATGGAACTGTGTGTCCAG
GAGAAAAAGGATCAGTTGAAGGGAACGGTGGACGAGATGGTGcttgagga
tgaggagcgagaggaCTATATATTTGTTACGGACGGAACTGAACAGAATG
TTCACCATTGCCAAGGTCTTCTGAGGGCTTTCTTaccggagaaaaagaga
gcagggaaaaaaatggttgaaaaagaaagtaaTTTTCCCGACAAGACACA
CCAAGAAATATTGTGAATGATAGCAGGGACTTTAGTGGGGACGATGAGAG
CTGGACTGCGTCGACGCGTCGCTACCCTGAACATCCAAGGTCTTGTTCCT
TACTCCTTGGCTTGGCAACTGCAGCAGAAATTGGTGGCACAACGCATTGT
ctggcagaaggaggaacaATCTGGCTTTGACGCCATGTTGGTCCTGGAGC
ACTCGCCTGTCTACACATTAGGCCGCTCTGCCAAGCCCGGGGATGTTAAA
TTTCCTCTGGTGGAGGGTACTggccagggcgggcggggattTGAGGTCTT
CAAAACGGACCGAGGCGGACAAGTAACTTGGCATGGTCCCGGCCAGATAG
TGATCTACCCAGTGGTGGACCTGACGCACCACAAGAAGGATTTGCGGTGG
TACGTCAGGGGCCTAGAAGAGGTGGTGCTTCGGGTGCTCGCCTTAcacgg
ggtggagggacagcgggacgagaaacacaCAGGCGTGTGGGTGAAAGAGC
AGGgcccggagggggaggagctgacGAAGGTGGCCGCGATCGGCGTCTCC
GCGAGCCGGTGGGTGACCTGCCACGGCCTAGCCCTGAATGTAGACCCAGA
CCTACGGGCTTTCGAGTCGATTGTGCCGTGTGGCGTGAGAGACCGTAGAG
TCGGGTGCCTCAAAACCCTCCTCTCACCTCATGTCGCAGCCGAGCTAACG
ACAGCTCAAGTGCGCTACGAGCTCATGGAGGCTTTTGAAGATGTTTTCCC
GAGCATGGAACTGTGTGTCCAGGAGAAAAAGGATCAGTTGAAGGGAACGG
TGGACGAGATGGTGcttgaggatgaggagcgagaggaCTATATATTTGTT
ACGGACGGAACTGAACAGAATGTTCACCATTGCCAAGGTCTTCTGAGGGC
TTTCTTaccggagaaaaagagagcagggaaaaaaatggttgaaaaagaaa
gtaaTTTTCCCGACAAGACACACCAAGAAATATTGTGAATGATAGCAGGG
ACTTTAGTGGGGACGATGAGAGCTGGACTGCGTCGACGCGTCGCTACCCT
GAACATCCAAGGTCTTGTTCCTTACTCCTTGGCTTGGCAACTGCAGCAGA
AATTGGTGGCACAACGCATTGTctggcagaaggaggaacaATCTGGCTTT
GACGCCATGTTGGTCCTGGAGCACTCGCCTGTCTACACATTAGGCCGCTC
TGCCAAGCCCGGGGATGTTAAATTTCCTCTGGTGGAGGGTACTggccagg
gcgggcggggattTGAGGTCTTCAAAACGGACCGAGGCGGACAAGTAACT
TGGCATGGTCCCGGCCAGATAGTGATCTACCCAGTGGTGGACCTGACGCA
CCACAAGAAGGATTTGCGGTGGTACGTCAGGGGCCTAGAAGAGGTGGTGC
TTCGGGTGCTCGCCTTAcacggggtggagggacagcgggacgagaaacac
aCAGGCGTGTGGGTGAAAGAGCAGGgcccggagggggaggagctgacGAA
GGTGGCCGCGATCGGCGTCTCCGCGAGCCGGTGGGTGACCTGCCACGGCC
TAGCCCTGAATGTAGACCCAGACCTACGGGCTTTCGAGTCGATTGTGCCG
TGTGGCGTGAGAGACCGTAGAGTCGGGTGCCTCAAAACCCTCCTCTCACC
TCATGTCGCAGCCGAGCTAACGACAGCTCAAGTGCGCTACGAGCTCATGG
AGGCTTTTGAAGATGTTTTCCCGAGCATGGAACTGTGTGTCCAGGAGAAA
AAGGATCAGTTGAAGGGAACGGTGGACGAGATGGTGcttgaggatgagga
gcgagaggaCTATATATTTGTTACGGACGGAACTGAACAGAATGTTCACC
ATTGCCAAGGTCTTCTGAGGGCTTTCTTaccggagaaaaagagagcaggg
aaaaaaatggttgaaaaagaaagtaaTTTTCCCGACAAGACACACCAAGA
AATATTGTGAATGATAGCAGGGACTTTAGTGGGGACGATGAGAGCTGGAC
TGCGTCGACGCGTCGCTACCCTGAACATCCAAGGTCTTGTTCCTTACTCC
TTGGCTTGGCAACTGCAGCAGAAATTGGTGGCACAACGCATTGTctggca
gaaggaggaacaATCTGGCTTTGACGCCATGTTGGTCCTGGAGCACTCGC
CTGTCTACACATTAGGCCGCTCTGCCAAGCCCGGGGATGTTAAATTTCCT
CTGGTGGAGGGTACTggccagggcgggcggggattTGAGGTCTTCAAAAC
GGACCGAGGCGGACAAGTAACTTGGCATGGTCCCGGCCAGATAGTGATCT
ACCCAGTGGTGGACCTGACGCACCACAAGAAGGATTTGCGGTGGTACGTC
AGGGGCCTAGAAGAGGTGGTGCTTCGGGTGCTCGCCTTAcacggggtgga
gggacagcgggacgagaaacacaCAGGCGTGTGGGTGAAAGAGCAGGgcc
cggagggggaggagctgacGAAGGTGGCCGCGATCGGCGTCTCCGCGAGC
CGGTGGGTGACCTGCCACGGCCTAGCCCTGAATGTAGACCCAGACCTACG
GGCTTTCGAGTCGATTGTGCCGTGTGGCGTGAGAGACCGTAGAGTCGGGT
GCCTCAAAACCCTCCTCTCACCTCATGTCGCAGCCGAGCTAACGACAGCT
CAAGTGCGCTACGAGCTCATGGAGGCTTTTGAAGATGTTTTCCCGAGCAT
GGAACTGTGTGTCCAGGAGAAAAAGGATCAGTTGAAGGGAACGGTGGACG
AGATGGTGcttgaggatgaggagcgagaggaCTATATATTTGTTACGGAC
GGAACTGAACAGAATGTTCACCATTGCCAAGGTCTTCTGAGGGCTTTCTT
accggagaaaaagagagcagggaaaaaaatggttgaaaaagaaagtaaTT
TTCCCGACAAGACACACCAAGAAATATTGTGA back to top
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