rna4595, rna4595 (mRNA) Nannochloropsis gaditana

Overview
Namerna4595
Unique Namerna4595
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1712
Alignment locationCM002463.1:994704..995553 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100014g74.9319.mrna
Orig protein idgnl|cribi|Naga_100014g74.9319
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:994704..995553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100014g74gene4433Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4595rna4595-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26142.1cds4583Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4595 ID=rna4595|Name=rna4595|organism=Nannochloropsis gaditana|type=mRNA|length=1712bp
CACACGACTGCATAGGGCAACATTCAGGGACCACCAGTGAGCCTTACCCC
AGCCTCTAAGTACTCATTCATTCAGCCTTTTTAAAATAATAAAAAGCCTC
ATGTGGCTGGCCCTAAGAAGCCCTAAAAATGTTGAAAATGTACCGCACCT
TTCGCGCCCCTCGCGCCCCTCACGCCCCTCGATGTTCTCCAGCGCACTTC
CGATACCACCTCGATTTTGAAGGTGCGACCATTCCCTACAAAGAAATCTC
TGCGTACAAACGTTATAACTGCGATATCCAGTGTGATGAGCAGAGGTATT
ACTGACGCCAGCCAATTGAGCCTTTACCAATTCCATATGTTTCAATTTTC
TAACATGGGGTCCACGTTGTTCGGGGGGTAAAATGCCATTATACCTCTAT
GACCTGTGCGACCACCATCAGGATTAACGCGGATCTGGGTTGCACAGAAA
TGCTCCGAGGATGGTGTACATAAATGGATAATTGCTGATCTTGGCTACAC
ATATTAGGTGTCAGTAGCCTGAAACATGATGGTCAACTTGGAGGTCTACT
GCAACATGTTGCTAAATTTGGTCTGAGGCGTTGGGATCGTTATTACAAAC
TAGTATTTTGTTTCAAGAGACGCTTTCCACTACGTGCTTCTTCTTTCTTT
TTTCCACTATCTCTTCACAACGGTATTTGTCAATGTAATGGCCAAAGCAA
GAATTTTTGTTCCCGGAGATATCGCAAGTAACAAATGCGCGACCCTATCT
ACAGTATGAAGCGATCTCCCAGGAAAGTTTATTTTTCAAATTATGTATAC
CGAACGACTGATTTTCTCATTTCCATTCTCTCAAAAGGCATCTTTCGGAT
CCATTGTTTTCATGAACCTGAGCTTAGCACACAATTCGGACTTGGAATGT
ACTTCGATTCAGCTCTTGTACAGTACTTGCCCTCTTGTGACAATCGGGAT
GCTTGTCGTTATCCCGCTCTTTCACGACGTGCAACAACTGGTTCAGGTCG
AAGTTTTCAAACCTTCGTAAGTAAACGTTGTCATTTCCTGCATTCTGGCT
CTGGACATCAATGTGTCAAATTCCTTGGTTTTAGGAAAAACATCACCCTT
GGTCTATCAGGTTCTCTGACATTTCAAATTATCGGTCATCTTTATATTGG
GCTTCAATGTCTTCCATTACCAATATAATGCGAGCGTCATCGTTGGCATA
TCTCTAGCTTGGGAGGTGTTGTGGCGTATACAGAAATTGGGCGATGTGAG
AAGCCGATGATGCATCACATCGATAATGATTGCAATGGACTTAAGGACGG
CCTTTTATTGAATGATTATCCTCGACGACAAGTTGAGGAAATCACTGAAC
AGACAAAAAGGTCAGTATAGCTCACGATAAATCCTATGTATGTAAATAAG
ACTGCAGATTTAACAAATGTCCTTCGGATGATTATAACTCTTGCCAATCA
GAATTACCTCGCGTTTATGAAATCAGGATGGTGTTGTCATTTCTTCGAAA
TTACGACGAGGGGTTGTATTCGATATAGAGATTCTGGTCGCTAGTCGCTC
AAAAGCGCTGTCTCATTACACAAAGTAGAAAGACGCAGGATTTTGCGACT
GAGGTCTTGCGCTTGTGAGAAAAAAAATTAAAAGCGTGATGTGCGGTAAG
GACACCGCGGCTCTAGGGTTTAAGTAGAAGCAAAGAAGAAAGTGTATTAG
AATACAACATTG
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protein sequence of rna4595

>rna4595-protein ID=rna4595-protein|Name=rna4595|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MSTCQPWSLFRPKIDRKSPNASWLLRALIILPVFLPFKYNQSFNIKAQKD
WNVVILRQAYVTTDVAARKQAFSSCSGTARPNAQCRISELCSDAASANQS
EAEIVVEKIRELSLRKTKGMKSLTAAMWRLSFLYKPFYKQVAAQAETHIV
VLLLLLHSLPGLRVSLRVPLRLLRGGRLNQELVQAAAVTLDHAITQLKQA
GC
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mRNA from alignment at CM002463.1:994704..995553-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4595 ID=rna4595|Name=rna4595|organism=Nannochloropsis gaditana|type=mRNA|length=850bp|location=Sequence derived from alignment at CM002463.1:994704..995553- (Nannochloropsis gaditana)
ATGTCAACTTGTCAGCCCTGGTCCCTTTTTCGCCCAAAAATCGATCGAAA
AAGCCCGAACGCTTCGTGGCTTCTTCGTGCGCTTATCATTCTCCCCGTCT
TCTTGCCCTTTAAATACAATCAAAGCTTTAATATCAAAGCACAGAAGGAT
TGGAATGTGGTCATCCTTAGGCAAGCGTATGTGTCTTAAATAGACCGCAA
AATTTTGTATTTTCATTCAATGTAACTCACACGTCCAACGCACAATCCCG
GACGACTGACAGCACCACTGATGTGGCGGCTAGGAAGCAGGCATTCTCAT
CTTGCAGTGGCACAGCAAGGCCAAATGCACAATGCAGGATATCTGAGTTG
TGCAGTGACGCCGCCTCCGCTAACCAGTCTGAGGCCGAAATTGTCGTCGA
AAAAATCAGGGAGCTCAGCCTGCGGAAGACAAAGGGTATGAAGAGTCTCA
CGGCGGCCATGTGGAGGCTTTCATTCCTCTACAAGCCCGTTCAGGCCACC
ACCCGGGGAGGTTGATATTGCATGCAATGCCAAAAGTTCTACAAGCAGGT
TGCCGCCCAGGCGGAAACACACATCGTCGTCCTCCTCCTCCTTCTGCATA
GCCTCCCAGGCCTCAGGGTGTCGCTTCGAGGTGTGTGCTTCCGCTTGTGC
AAAACCCTACTTATGTCGCGAGGGGATGGTGGGTGCATAATGGGAACCAG
TTCAACATCTCAGCTCCCTCTCCCGCTCAATCAAACAAAAAAGTGCCTCT
CCGACTTCTACGCGGTGGCAGACTCAATCAAGAACTCGTTCAAGCCGCTG
CGGTGACCCTGGACCACGCAATCACCCAGCTTAAGCAGGCGGGATGCTAA
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Coding sequence (CDS) from alignment at CM002463.1:994704..995553-

>rna4595 ID=rna4595|Name=rna4595|organism=Nannochloropsis gaditana|type=CDS|length=2436bp|location=Sequence derived from alignment at CM002463.1:994704..995553- (Nannochloropsis gaditana)
TGCCTCTCCGACTTCTACGCGGTGGCAGACTCAATCAAGAACTCGTTCAA
GCCGCTGCGGTGACCCTGGACCACGCAATCACCCAGCTTAAGCAGGCGGG
ATGCTAATTCTACAAGCAGGTTGCCGCCCAGGCGGAAACACACATCGTCG
TCCTCCTCCTCCTTCTGCATAGCCTCCCAGGCCTCAGGGTGTCGCTTCGA
GCACCACTGATGTGGCGGCTAGGAAGCAGGCATTCTCATCTTGCAGTGGC
ACAGCAAGGCCAAATGCACAATGCAGGATATCTGAGTTGTGCAGTGACGC
CGCCTCCGCTAACCAGTCTGAGGCCGAAATTGTCGTCGAAAAAATCAGGG
AGCTCAGCCTGCGGAAGACAAAGGGTATGAAGAGTCTCACGGCGGCCATG
TGGAGGCTTTCATTCCTCTACAAGCCCATGTCAACTTGTCAGCCCTGGTC
CCTTTTTCGCCCAAAAATCGATCGAAAAAGCCCGAACGCTTCGTGGCTTC
TTCGTGCGCTTATCATTCTCCCCGTCTTCTTGCCCTTTAAATACAATCAA
AGCTTTAATATCAAAGCACAGAAGGATTGGAATGTGGTCATCCTTAGGCA
AGCGTATGTTGCCTCTCCGACTTCTACGCGGTGGCAGACTCAATCAAGAA
CTCGTTCAAGCCGCTGCGGTGACCCTGGACCACGCAATCACCCAGCTTAA
GCAGGCGGGATGCTAATTCTACAAGCAGGTTGCCGCCCAGGCGGAAACAC
ACATCGTCGTCCTCCTCCTCCTTCTGCATAGCCTCCCAGGCCTCAGGGTG
TCGCTTCGAGCACCACTGATGTGGCGGCTAGGAAGCAGGCATTCTCATCT
TGCAGTGGCACAGCAAGGCCAAATGCACAATGCAGGATATCTGAGTTGTG
CAGTGACGCCGCCTCCGCTAACCAGTCTGAGGCCGAAATTGTCGTCGAAA
AAATCAGGGAGCTCAGCCTGCGGAAGACAAAGGGTATGAAGAGTCTCACG
GCGGCCATGTGGAGGCTTTCATTCCTCTACAAGCCCATGTCAACTTGTCA
GCCCTGGTCCCTTTTTCGCCCAAAAATCGATCGAAAAAGCCCGAACGCTT
CGTGGCTTCTTCGTGCGCTTATCATTCTCCCCGTCTTCTTGCCCTTTAAA
TACAATCAAAGCTTTAATATCAAAGCACAGAAGGATTGGAATGTGGTCAT
CCTTAGGCAAGCGTATGTTGCCTCTCCGACTTCTACGCGGTGGCAGACTC
AATCAAGAACTCGTTCAAGCCGCTGCGGTGACCCTGGACCACGCAATCAC
CCAGCTTAAGCAGGCGGGATGCTAATTCTACAAGCAGGTTGCCGCCCAGG
CGGAAACACACATCGTCGTCCTCCTCCTCCTTCTGCATAGCCTCCCAGGC
CTCAGGGTGTCGCTTCGAGCACCACTGATGTGGCGGCTAGGAAGCAGGCA
TTCTCATCTTGCAGTGGCACAGCAAGGCCAAATGCACAATGCAGGATATC
TGAGTTGTGCAGTGACGCCGCCTCCGCTAACCAGTCTGAGGCCGAAATTG
TCGTCGAAAAAATCAGGGAGCTCAGCCTGCGGAAGACAAAGGGTATGAAG
AGTCTCACGGCGGCCATGTGGAGGCTTTCATTCCTCTACAAGCCCATGTC
AACTTGTCAGCCCTGGTCCCTTTTTCGCCCAAAAATCGATCGAAAAAGCC
CGAACGCTTCGTGGCTTCTTCGTGCGCTTATCATTCTCCCCGTCTTCTTG
CCCTTTAAATACAATCAAAGCTTTAATATCAAAGCACAGAAGGATTGGAA
TGTGGTCATCCTTAGGCAAGCGTATGTTGCCTCTCCGACTTCTACGCGGT
GGCAGACTCAATCAAGAACTCGTTCAAGCCGCTGCGGTGACCCTGGACCA
CGCAATCACCCAGCTTAAGCAGGCGGGATGCTAATTCTACAAGCAGGTTG
CCGCCCAGGCGGAAACACACATCGTCGTCCTCCTCCTCCTTCTGCATAGC
CTCCCAGGCCTCAGGGTGTCGCTTCGAGCACCACTGATGTGGCGGCTAGG
AAGCAGGCATTCTCATCTTGCAGTGGCACAGCAAGGCCAAATGCACAATG
CAGGATATCTGAGTTGTGCAGTGACGCCGCCTCCGCTAACCAGTCTGAGG
CCGAAATTGTCGTCGAAAAAATCAGGGAGCTCAGCCTGCGGAAGACAAAG
GGTATGAAGAGTCTCACGGCGGCCATGTGGAGGCTTTCATTCCTCTACAA
GCCCATGTCAACTTGTCAGCCCTGGTCCCTTTTTCGCCCAAAAATCGATC
GAAAAAGCCCGAACGCTTCGTGGCTTCTTCGTGCGCTTATCATTCTCCCC
GTCTTCTTGCCCTTTAAATACAATCAAAGCTTTAATATCAAAGCACAGAA
GGATTGGAATGTGGTCATCCTTAGGCAAGCGTATGT
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Synonyms
Publications