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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100014g67.9263.mrna |
| Orig protein id | gnl|cribi|Naga_100014g67.9263 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:978815..981935 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4589 ID=rna4589|Name=rna4589|organism=Nannochloropsis gaditana|type=mRNA|length=3904bp
GAGGATGCCGCCTTGGCCACGAGGTTACGCCGCTGCCGTAAGCTACTTTG
CAGATTTCATAACCTCCTAACCTGGCTTTCTTCCTGGGAAAATATCACAT
CAACACAATAAACTTCTTGTTCACAGGCATCTAGGCCCAGGAGGGAGGGA
GGGACGGGGCACGGGCAGCGCAAATAGAAGCCCTCCACTGCCATTCAGGC
TCTTCCATCTGTACATACTATACCATCCACGAGGCTGGCAGCGAAGGACT
CGAGATCAACAAGTGGCAGCTATGCTGCGTGCAGGTTGCGCGAAAAGTTA
TGGGAAGGGAAGGTACCACTTGGTGGGTCAGGGCCTTCCAATCATAAGTA
AGAGCCGACCTCATGGTGTTCCGCTGAGGGCCATGGCAGCGGCGCGGCGG
CTTTGGGACCGTACGACTGTTTCCAACTCCGTGGCTTCTATCCTGCCCAC
GTCCTCCCCTTCTTTTGAGGCTCGATCAATCCAAGCCCAAGCATCCGTCT
TCACCTCTGATTCAGCCATCATCTCCGACTGTGGCAACGCCCTGGAAAGC
AGCAGCACCGAGACCCGAAGGGCCAACAGCACCGACTCCTTCAAAGAGCT
GTACCACGTTCTGAAGCAGCAGCAAGAGATGGACATTCTACAGCGGCGTC
TCCGACAAGGAGATCAGCCTATGCTGCCGCCTACTATCGAGAGTCTGCGC
GATCAGGCGGCGGCATTGATGCGGCCGGGGTGGGCCGAGGAGGGGGGGGC
GCGAGTCAGAGGTGTGTCTGGTCGGGACACAGAGGCGGGAGGGCGCAGCA
ACAGTAACATGCTGATTGGAGAAGCCAATGAGACGGCCTTTTTCCTGGAT
GAAATCGAGGAAGATATGTATCCCCCATTGGGGCCGGAGAGCGTGCAGGG
CGGCGGGTCACACGAAGGTCTGCAGCAGATTAAAGAGCACCTGGCTCCGC
ACGCGCGCCCCTCATCCGTCAACACAAAGAGAGAGCAGCTGCGTAACCTG
GAGGTGGCCTTCGAGGAGGGCACCATCAGCGAGGCTCTGGCTGAGTACAA
GGAGGTCCAGGACACCCTCTTCCGGACGGGGAAGGCGGCCTACCTCCCTG
TGGTCAAGCGGCAGATATTCGCCTGGTACGGCCCCATGATCGAGGCGATG
ACCGCCCTGCACGCCAAACTCCGCGAGGGGAAGTGGTCCGACCTGGGCAA
CGGCGTGGGCACATACGGACCCTTCCTGATCCTGGTCCCTCCCGACAAGC
TGGCCGTAATCACCGTGAATGAGACGGTGAATTTGATCCTCCGCCACGGC
AACCAGGGCGTGCCCCTGACCATGCTCCTCCTCCACATTGCCGACGCCGT
CCGCACCGAGGTGAACTTTCTGCGCCTAAGTGAGACCTACGGGGACCGGG
TCTTGAACATTCTGCGGGAAAACGGAATGATCAGCCTCAAGCGCGTGAAC
CGGAAGGCGCGGGAGGCGCTCGAGGATGGGGTCTGGCGGGCGGACCTGAA
GATCAAGGTTGGCGGCATGCTCCTCAGCGAGCTCCACCGTGTCGCAAAGA
TCTCTCCTGAATGTCTGCTGGACGGCGCGAAGGAAGCTCACGGGCTGGAG
GGGCCCGAGGTTGGGCCTGGGAGAGAAAAAAGCCTGGAAAAAAGAATGCG
GCTGCAAGCGCCGCGGTTAGACCAAGCTGGGGGGGGGGCAGAGGGAGGGG
CAGACTCGACTGACGCCTTGACCTCGGCAAACAGGGAAGTGGAGCGTCCG
CCCGCCTTATCCATCGCACTAGAGAGCACCCACAGCATCAAGAAGCGCGG
GCTCGTCTTCCTGGACGAGGCCGTCTACCGGAGCATGGCTGGCGCCGCGG
ATGTCCAGCACTACCTGACCCCGCGGTACCGGCCGATGGTGGTGCAGCCC
CGGCCCTGGAAGTCCTTTGACTCGGGCGGATACTTGCAGCTCAAGTCCTT
CATCGTCCGCTCTCAGAACTCCAAGGCCCAATTCGACGCCTTGCGGGGCG
CGCGCATGCCGGAGGTCTATCACGCGCTCAACTTTCTGGGCCGCGTGCCC
TGGGTCATCAACGGGGAGGTGTTAAGCACCATCCAAGAGGCCTACGCTCG
GGGGCTAACGGTGGGAGACCTGCCTAGCCAGTTGGATGAACTTGTCCCGC
CGCTCTCCGGTCATCCGTCCCATCCCCCGCCTGCGGACCCTGCCCTCCTG
GGAGCTGAAGAGGACGGGGTGCCAGGCAGGAGGGCCGAGGAGCGCCGGCT
TCTGCGTGATCGCTGGCAGATTGCTCGGCGCGTGAAGAAACGCAACGCGG
AGCTTTTCTCGCTCCGTTGTGACACAGAGATCAAACTCGGCATCGCAGAG
GAGTTTCGCAACCACACCTTTTATTTTCCCTACAACCTGGACTTCAGGGG
CAGGGCCTACCCTGTGCCTCCAAATCTGAACCATCTGGGCTCGGACATGT
GTCGTGGTATGCTGCGATTCGCAGAAAAGCGGCCCTTGGGAAAGAATGGG
CTTCGGTGGTTGAAAATCCACCTGGCCAATTTGTGTGGACAAGACAAGCT
GTCCTTCGACGACCGGGTGGCCTTCGTTGAGGAGAAAATGGAGAATGTTC
AGGATTCAGCGGCGCGGCCGTTGAACGGCCAGGGATGGTGGCAGAAGGCG
GAAGAGCCGTGGCAGGCTCTGGCAGTGTGCAAGGAGATCGTGGCCGCCGT
GGAGAGCGGGGACCCTGAGAGCTTCCTGTCAGGCGTGCCGGTGCACATGG
ACGGCTCCTGTAACGGGCTGCAGCACTATGCGGCCCTTGGTAGGGACGAG
GAGGGGGCGAAGCAGGTGAATTTGATCCACTCGGCCGTGCCCCGGGATGT
GTACACAGGTGTGTGCGACCGCGTGATCAAGCACGTCCATTCCGAGGCCA
CGCGCGCCTTGGGCCGGACGGCGACAGAGGAGGAGCGACGGCAGCAGCGG
CACGCCCGGCTCGTGGACGGCCTCATCAATCGAAAAGTAGTGAAGCAGAC
GGTGATGACGAGCGTGTACGGGGTCACCTACGTGGGGGCCCGGAAGCAGA
TTCAGGCGCGTCTGAAGGAGAAGTTCCAAGAGCGGGAGAAGGGGCGGATG
CTGACCAAGGAGGAGGAGCAGGAAGTGTACGAGGCGTCGCGCTACGTGGC
CACAATTACGCTCTCCAAGCTGGCCGAGCTCTTCTCAGCGGCTCGGAACA
TCATGGAGTGGCTTTCCACCTGCGCGAGCCTGGTGGCCCGGCAAGGCCAG
CCCATGTCCTGGGTGACCCCCCTGGGCCTCCCGGTCATCCAGCCCTACCG
GCGGGACAAGGGCCTGCTCGTCAAGACGCTGATCCAGAGCGTTATTCTGG
TTGACTGCAACGACAAGCTCCCCGTCTCCTCCTCTCGTCAACGCTCTGCC
TTCCCCCCCAACTTCGTCCATTCCCTGGACTCCACCCATATGCTCATGAC
TGCCAACCGCCTGCAGGGCCTGGGCGTGCCTTTCACGGCTGTGCACGACA
GCTACTGGTGCCACGCGAGCAACGTGGAGGTGATGAACGCCACCCTCCGC
GAGTGCTTCATTACTCTGTACGAGCAGCCTGTCTTGGAGGCTCTACGAGA
CTCCCTTGTCGCGCGCTTCCCGGACGTGGCGTTCCCACCGATCCCGCAGC
GAGGTAAGCTGAGGCTAGAGGAAGTCAAGGACTCCCCCTACTTTTTCGAC
TAGGGCGCTTTGAGACGCACGAAGGAGAGACAGACGGCGAGAAGTTGTGG
GATGAATTTGTGTAGAGATTGCGCTGCGAGCATCCTGAAGCTCCCATGTT
CTATTTGCGAGGAAGGAAGATTCCCCCGCAAAATTTTTCGAGGCAAGTAA
AGGATACAAAATGTCAGATAACTCAAAGAATAAAGCAGGGCGACACACCG
TTTC back to topprotein sequence of rna4589 >rna4589-protein ID=rna4589-protein|Name=rna4589|organism=Nannochloropsis gaditana|type=polypeptide|length=280bp
MSPHHAPPFNLQLYYGARRVVPAIVALLCLIRLTQAFLAFPYQGGKHSQV
VFVRKPFLLVSNDGLDSQSVDEAIMKSAMAAIQEDKAQRQQKKQEQDSIQ
DEGPRNLRDFYSVEAAVEEMAEAEERYVQARARRERFLMEAQANFRKLAE
RADEELQAFVAEEEAAAQDLERRAKEVREVKEEVSVLVKEADELRAGGKG
LLASVDLVLALSILVVLDTFYVSYLTYRGSDLVSSSLATEALLGGVLFFK
IKQREAAQLDKEKSRPDDGSNERRNLRNGS back to topmRNA from alignment at CM002463.1:978815..981935+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4589 ID=rna4589|Name=rna4589|organism=Nannochloropsis gaditana|type=mRNA|length=3121bp|location=Sequence derived from alignment at CM002463.1:978815..981935+ (Nannochloropsis gaditana)
TTGGCTTGTCCACGACTTCTCGACCTTACGATTGCTCTCATTTTCCCGGA
AGGGTCATCATCAGGCGCCTGACTCTCCATCGGCCAGTCTACGCGCGCTT
TAGGATGAGCCCGCACCACGCACCCCCCTTCAACCTACAACTTTACTATG
GAGCCCGCCGGGTCGTGCCAGCCATCGTTGCTTTGCTTTGTCTCATCCGC
CTTACCCAAGCCTTTCTTGCCTTTCCGTATCAGGGGGGCAAGCATTCGCA
AGTGGTATTTGTTCGgaagcccttcctcctcgtcagtAATGATGGACTGG
ATAGCCAAAGCGTCGACGAAGCGATCATGAAATCCGCCATGGCTGCCATT
CAAGAGGATAAAGCGCAAAGGCAACAAAAGAAGCAAGAGCAAGACAGTAT
ACAGGATGAAGGACCCAGAAATTTACGTGATTTCTATAGCGTAGAGGCAG
CGGTTGAGGAGATGgctgaggcggaggagcggtaTGTGCAGGCCCGGGCT
CGGCGGGAGCGATTTCTAATGGAGGCGCAGGCTAACTTTAGGAAATTGGC
AGAAAGGGCCGATGAAGAATTACAGGCTTTTGttgctgaggaggaggctg
cggcACAGGACTTGGAGAGAAGAGCGAAGGAGGTGAGagaggtgaaagag
gaagtaTCGGTCttggtgaaggaggcggacgagctACGAGCTGGAGGCAA
gggcctccttgcctccgtcGACCTCGTGTTGGCCTTATCAATCCTGGTGG
TTCTGGATACCTTTTATGTGAGCTACTTGACTTATCGCGGCAGCGACCTT
GTGAGCTCCTCGCTGGCCACGGAGGCTCTTTTGGGAGGCGTCTTGTTCTT
CAAGGTACGACTGGGAGTGACAAGGCTCGAGAGCTTTCGTGCCTGTGACA
ACTGTGACAACGTCGTTCTAGAGATCCTACATAACATGCATCAAATCTTC
TTTGTCCACTCTGCATGGCACAATTTACAGATCAAGCAACGAGAGGCAGC
CCAACTGGATAAAGAGAAAAGTAGACCTGACGATGGAAGCAACGAGAGGA
GAAATTTGCGAAATGGGTCATAAAAGAAGAGACTGAATTTATATGTGTGA
ATGGATAAAGGTGCTACGAAGAATAGCGTGGTGATCAAAATACAATGGAG
GCTATTTCCGCAAAGCAATCGAATAACAAATCTTCGTGGCCCGCTTGCCG
ACTTGGTACTACTGTGAACAGACACCGACGACCTGACGTTTCTCTCGCTG
GCTGAATATGATGGAGGAAAGATGTCATATCTTTCGTTGGAGGCATTCAC
TCCATGCACTGCGCGTTCAGGCTCAACCTTTTCACCCTTTAagtcgcttc
ctcttcttgccccttCTTTCGGCCTCGCTGCGCCCTGTGCGCGACGTACT
CCGTATAGTTCCCCGCGAACATTTTCACCGAACCAGCGCCCTCGAAAGCG
AGGGTATGGGTACAGACGCGGTCCAGGAACCAGCGGTCGTGCGAGATGAC
GACCGAGCAGCCGGGGAACTCCCgcagagcctcctccagcgcccgcAGCG
TCTGCACGTCAAGATCGTTCGAGGGCTCGTCCAGGAATAAGAGGTTGTGC
CGACGTTTCATCACCTTGGCAAGGTGCACGCGGTTCCGTTCCCCCCCGCT
GAGAGAGCCGACGAGCTTCTCCTGCATGGAACCCTTCAGGTTGAAGGCCG
CCAGGTAGGCGCGAGTGTGGACCGTTCGACCCTCGAGAACGATCACGTCC
TCGGATTGCGCCACCTCCTCATAGACGCTCTTCCTGTCGTCGAGCTCCTG
GTCGCGGACCTGGGAGACCAGGCCCAAGCTCACGGTTGAGCCTATCTGCA
CGGACCCGGCGTCTGGCTCCGCCCGCCCGCACAACACGTTGAACAAGGTG
CTCTTTCCGCAGCCGTTCGCTCCGATTACCCCCACAATCgcgcccgcctc
caaatCGAATGACACGTTGTCAAACAGAACCTTGCTCGAGACGCGCTTGC
TCAAATTTTCCACCGTCATGACACGATCGCCCAGCCGAGGTCCCGGCGGG
ATGACAATTTTGCCCGTTTCCAACTGGTGAATCTTATCCGCAAGACCCTG
CTGCTCAATTCGGcgcacctccaccgcctttaCTCTGGCCTTACTCGCCT
GCTTCGACCGCAGACGGATCCACTCGAGCTCTGCCTGCAGAGCGCGAGCC
TGTgctgcctcttttcctcgctCCAGGTCCAGACGAGCGGCTTTGTGCTC
CAGCCACTGTGTGTAGTTgccttggaagggaaggagcgaccCTCGATCTA
CCTCCAGCACCCACCGGGCAATATTGTCTAGGAAGTATCGATCGTGCGTA
ACCGCGATAACCGTCCCTCTGTACTCTTGCAGAAACCTCTCCAGCCAGGC
CACCGAGTCCGCATCCAGGTGGTTCGTGGGCTCGTCCAGAAGCAACACGT
CCGGTTGTTCCAATAACATGCGGCATAGAGCTACGCGTctccgctctcct
cctgatAAAGATATAATGGAAGCGTCTGGTGGAGGTAAGTGTAGAGCTTT
CATCACAGTATCAACGCGGTGCTCCACATTCCAGCAATCCAAAGCCTCGA
TCCGCCCTTGCAACtcggcctgctcctccaacagcTTATCAAGATCCGCA
TCCGTTTCCCCCATTTTCATCGCAATTTCGTCAAATTTCTGCACTAGCGC
CTCTTGCTCCGCGATGCCCAATCTCACGTTTCCTTTCACATCAAGCGCAG
GGTCGAGCTGTGGCTCTTGCGCAAGGTACATAAACTTTACATCTGGCTTC
CGCCATACCACCCCGTGATGCTCCTGGTCCACGCCACTGATTATTTTTAA
TAGAGATGACTTCCCAGAGCCATTCACGCCCAAGACACCGATTTTTGCCC
CCCGGAAAAAGGATAGCCTTGTGTCTTTCAGGAGCACGCGGCCTCCAGGT
AAAACTTTCGTCACGTCAGACAAACTACAAATGATTTCTCCTGTCGATGG
CGCATTGGAGGGATTAGAGCCGCCTCCTTGGCAAGAGTATAGCCGATATC
GATGTTGAAGCCCTAACCTGGGTAATGCAAGCCGTAGTTTTGCAAGACGT
TGAAGTATTGGGGGCATCGGG back to topCoding sequence (CDS) from alignment at CM002463.1:978815..981935+ >rna4589 ID=rna4589|Name=rna4589|organism=Nannochloropsis gaditana|type=CDS|length=1686bp|location=Sequence derived from alignment at CM002463.1:978815..981935+ (Nannochloropsis gaditana)
ATGAGCCCGCACCACGCACCCCCCTTCAACCTACAACTTTACTATGGAGC
CCGCCGGGTCGTGCCAGCCATCGTTGCTTTGCTTTGTCTCATCCGCCTTA
CCCAAGCCTTTCTTGCCTTTCCGTATCAGGGGGGCAAGCATTCGCAAGTG
GTATTTGTTCGgaagcccttcctcctcgtcagtAATGATGGACTGGATAG
CCAAAGCGTCGACGAAGCGATCATGAAATCCGCCATGGCTGCCATTCAAG
AGGATAAAGCGCAAAGGCAACAAAAGAAGCAAGAGCAAGACAGTATACAG
GATGAAGGACCCAGAAATTTACGTGATTTCTATAGCGTAGAGGCAGCGGT
TGAGGAGATGgctgaggcggaggagcggtaTGTGCAGGCCCGGGCTCGGC
GGGAGCGATTTCTAATGGAGGCGCAGGCTAACTTTAGGAAATTGGCAGAA
AGGGCCGATGAAGAATTACAGGCTTTTGttgctgaggaggaggctgcggc
ACAGGACTTGGAGAGAAGAGCGAAGGAGGTGAGagaggtgaaagaggaag
taTCGGTCttggtgaaggaggcggacgagctACGAGCTGGAGGCAAgggc
ctccttgcctccgtcGACCTCGTGTTGGCCTTATCAATCCTGGTGGTTCT
GGATACCTTTTATGTGAGCTACTTGACTTATCGCGGCAGCGACCTTGTGA
GCTCCTCGCTGGCCACGGAGGCTCTTTTGGGAGGCGTCTTGTTCTTCAAG
ATCAAGCAACGAGAGGCAGCCCAACTGGATAAAGAGAAAAGTAGACCTGA
CGATGGAAGCAACGAGAGGAGAAATTTGCGAAATGGGTCATAAATGAGCC
CGCACCACGCACCCCCCTTCAACCTACAACTTTACTATGGAGCCCGCCGG
GTCGTGCCAGCCATCGTTGCTTTGCTTTGTCTCATCCGCCTTACCCAAGC
CTTTCTTGCCTTTCCGTATCAGGGGGGCAAGCATTCGCAAGTGGTATTTG
TTCGgaagcccttcctcctcgtcagtAATGATGGACTGGATAGCCAAAGC
GTCGACGAAGCGATCATGAAATCCGCCATGGCTGCCATTCAAGAGGATAA
AGCGCAAAGGCAACAAAAGAAGCAAGAGCAAGACAGTATACAGGATGAAG
GACCCAGAAATTTACGTGATTTCTATAGCGTAGAGGCAGCGGTTGAGGAG
ATGgctgaggcggaggagcggtaTGTGCAGGCCCGGGCTCGGCGGGAGCG
ATTTCTAATGGAGGCGCAGGCTAACTTTAGGAAATTGGCAGAAAGGGCCG
ATGAAGAATTACAGGCTTTTGttgctgaggaggaggctgcggcACAGGAC
TTGGAGAGAAGAGCGAAGGAGGTGAGagaggtgaaagaggaagtaTCGGT
CttggtgaaggaggcggacgagctACGAGCTGGAGGCAAgggcctccttg
cctccgtcGACCTCGTGTTGGCCTTATCAATCCTGGTGGTTCTGGATACC
TTTTATGTGAGCTACTTGACTTATCGCGGCAGCGACCTTGTGAGCTCCTC
GCTGGCCACGGAGGCTCTTTTGGGAGGCGTCTTGTTCTTCAAGATCAAGC
AACGAGAGGCAGCCCAACTGGATAAAGAGAAAAGTAGACCTGACGATGGA
AGCAACGAGAGGAGAAATTTGCGAAATGGGTCATAA back to top
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