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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100014g64.9335.mrna |
| Orig protein id | gnl|cribi|Naga_100014g64.9335 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:972561..973635 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4586 ID=rna4586|Name=rna4586|organism=Nannochloropsis gaditana|type=mRNA|length=1554bp
CACGCAGCTTCTTCATTCATGTGCTCTATATCTGGAAAGAGTTCGATACT
GCTAGTGGCTGTCATTTTACTGTCAAAAGATATCACGTCCACCAGATCCT
TCCGGCTGCCTTTATCATACGTCAAACGCGTATACATTCCTCCATGCAAT
GCTCAAGCATTCTTGCCACTACTATCCGTTTCTCAAGCTACCTCACGTCA
TTCGAGCCTGCTGGGCCTGATAAGATTACCTATGAGGGTGCCACGGACTG
CTGCATCCGATGAGACTGGGCTCGGTGGACGTCGGTTCCTTGTGTCAACT
GAGATGGGGACCGCCAGTGGACGAGAGACCACGCCTGATTTCGCTCAGAG
CAAAAGCAGCGATTCTATGGGAAACGAGGGCAATCTCACCATTTCTGAGC
CACTGCAATATACTACTGAAGAAGCTACCCTGGTGGAAACTAAAATAGAC
GGCATGCTTACCAGGAAAATCGATTTGTGGCCGCCTGAAGAAATATTTGA
ATTGCTGCCATTGCTGTTGAAGAGTTCTGTTTTCGAGTACGCCATCGACA
AGCGCCTTGAACAAGATCTTCGCTTGGACGGCACACCCCTCGTTCCCTCC
CTCGGTCGGCCCGAGAGCAAGTTTCGTCGTCGACTTGAGCACTCACGCTC
CTTTTTGGCGAGCTTGAAATACTCAGAGCAGCAGCGCCTTGCACGGCAAT
GGATCGAAGGGCTGTTAGAGGCAGCGACTGAGAGCACGGAGGCCATGGAC
GAGCGGGTCTTCGAGCTGCTCACGTACGAGAATGGCGTGTTGGTGGAGCC
CGTGCAGGAGGCGCTGGAAGACATGCTCCGTCGGCTCCGGTCCATGTCGC
CCGACGAGAAAACACTGACCCAAGCCGTCTTGGAGACCCTGCAGAAGAGG
GTGGAGGCCGAGGTCAGGACACGGGAGACGCCCTTCGTCCGGCTCTTGGC
CCTGCTCCTCCGGCTCCACTCTCGAGACGATCGTGAGCGAGTGCTGCGAA
CTGAGCTCCGCAACAGCCGCGTAATTGAAGAGTTCGCGGCATACCTGGAA
GAGGGAGCGGACTACGTGGCTCGACTGCGGCTAGGGCCTTGCTCCCTTCC
CGAGGACACCTCAGACGAGATGCAGAAAATCCTGGCGATCCTACGAGACT
TCACGCAAACCGGGGCGGGGGAGGGCGCGCAAGGCTGGACGAGAGGAGCG
GCGCCTTCTGTTCAACCCTCTTTCCAGCCGAGGCCAGAGGACATTGGTAG
GAGGGCGGTGGTGGACGTGGAGGAGGTCCGCGAGGGTGGAGAGGGGACTC
CGTCGTAAGTTTAGGGCCAGAAAAGAAAGATTCATGTGAATGAGAGATGT
ACAGAAGCACTGTCGTAAGCAATGGGTAACAGCCGTACCAGCGAGCAATT
ATGGTACCCGCGTTTGTACATCATCCTCTTCGTTTGATACATAATCCCGG
GGTTAGGGAGCCATCTGCAACAAATCAATCCACCCACGCCTTTGCCAAGC
ATTGTCAAGAACATGGCTGTGCCCCTCTAAATCTCTGTCACGTCGCCCTT
CTCG back to topprotein sequence of rna4586 >rna4586-protein ID=rna4586-protein|Name=rna4586|organism=Nannochloropsis gaditana|type=polypeptide|length=230bp
MDGSGRDHMHAAIQEDQREHPQCSYSTVRSHFSSFLNGSSKAETLTKIIR
NCQGEAPVEIYRHKQESDEASERGEGLFREYPHQRGLMPPLPWPGVGSEG
SVRGDVEHEDRLGPRGSGAEGVLAHMFGHMLDGALQNFSGGRWDGNSAFG
DLLGKVLPPLFPPSHYDEGCQRQEPYRVPRPPPSLPPGPPPRGFGERREG
RRDRDLEGHSHVLDNAWQRRGWIDLLQMAP back to topmRNA from alignment at CM002463.1:972561..973635- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4586 ID=rna4586|Name=rna4586|organism=Nannochloropsis gaditana|type=mRNA|length=1075bp|location=Sequence derived from alignment at CM002463.1:972561..973635- (Nannochloropsis gaditana)
CAGTTTCTAATTCAAATATAATCGAATCACGCTTCAGGCGCACACGCCAT
TGAAATCTTTCCAGCGTTCTTCCAGGAGCTCGTCATTTTCCGGGGAGTGC
ATTATGGACGGTTCGGGCAGGGACCACATGCATGCCGCCATCCAAGAAGA
CCAAAGAGAGCATCCGCAGTGCTCCTACTCTACAGTGCGCTCCCATTTCT
CTTCCTTTCTCAATGGGAGTAGTAAGGCCGAGACATTAACAAAAATTATT
CGCAATTGCCAAGGTGTGTTTAACGAACATCATCCCGGGGGGCGGCGCGC
GTGTAATGTACTGAAGAGCGATGAGTGTATGAGGAGCATATGAGAACACA
TGTTGCGTTAGTATTCCCGTAACAGAGAAGTTTGAATGTCACTCTTTCCA
TCACACGGCGCAGGAGAAGCACCTGTGGAGATATACAGGCACAAGCAGGA
AAGCGATGAGGCCTCGGAGCGCGGAGAGGGGCTTTTCCGCGAGTACCCAC
ACCAACGTGGTCTCATGCCCCCATTGCCATGGCCCGGTGTGGGATCTGAG
GGCAGTGTAAGAGGCGATGTAGAGCATGAGGACAGGTTGGGGCCTCGGGG
CTCGGGAGCGGAGGGCGTTTTGGCGCACATGTTCGGGCACATGCTGGATG
GAGCTTTGCAAAACTTTAGTGGCGGGCGCTGGGATGGTAATAGTGCATTC
GGAGATCTGTTGGGCAAGGTTTTGCCCCCCCTTTTTCCTCCCTCGCACTA
CGATGAAGGCTGCCAGCGGCAAGAACCATATCGCGTCCCGCGACCCCCCC
CATCTCTTCCCCCGGGGCCGCCACCAAGGGGGTTCGGCGAGCGACGAGAA
GGGCGACGTGACAGAGATTTAGAGGGGCACAGCCATGTTCTTGACAATGC
TTGGCAAAGGCGTGGGTGGATTGATTTGTTGCAGATGGCTCCCTAACCCC
GGGATTATGTATCAAACGAAGAGGATGATGTACAAACGCGGGTACCATAA
TTGCTCGCTGGTACGGCTGTTACCCATTGCTTACGACAGTGCTTCTGTAC
ATCTCTCATTCACATGAATCTTTCT back to topCoding sequence (CDS) from alignment at CM002463.1:972561..973635- >rna4586 ID=rna4586|Name=rna4586|organism=Nannochloropsis gaditana|type=CDS|length=1386bp|location=Sequence derived from alignment at CM002463.1:972561..973635- (Nannochloropsis gaditana)
GAGAAGCACCTGTGGAGATATACAGGCACAAGCAGGAAAGCGATGAGGCC
TCGGAGCGCGGAGAGGGGCTTTTCCGCGAGTACCCACACCAACGTGGTCT
CATGCCCCCATTGCCATGGCCCGGTGTGGGATCTGAGGGCAGTGTAAGAG
GCGATGTAGAGCATGAGGACAGGTTGGGGCCTCGGGGCTCGGGAGCGGAG
GGCGTTTTGGCGCACATGTTCGGGCACATGCTGGATGGAGCTTTGCAAAA
CTTTAGTGGCGGGCGCTGGGATGGTAATAGTGCATTCGGAGATCTGTTGG
GCAAGGTTTTGCCCCCCCTTTTTCCTCCCTCGCACTACGATGAAGGCTGC
CAGCGGCAAGAACCATATCGCGTCCCGCGACCCCCCCCATCTCTTCCCCC
GGGGCCGCCACCAAGGGGGTTCGGCGAGCGACGAGAAGGGCGACGTGACA
GAGATTTAGAGGGGCACAGCCATGTTCTTGACAATGCTTGGCAAAGGCGT
GGGTGGATTGATTTGTTGCAGATGGCTCCCTAAATGGACGGTTCGGGCAG
GGACCACATGCATGCCGCCATCCAAGAAGACCAAAGAGAGCATCCGCAGT
GCTCCTACTCTACAGTGCGCTCCCATTTCTCTTCCTTTCTCAATGGGAGT
AGTAAGGCCGAGACATTAACAAAAATTATTCGCAATTGCCAAGGAGAAGC
ACCTGTGGAGATATACAGGCACAAGCAGGAAAGCGATGAGGCCTCGGAGC
GCGGAGAGGGGCTTTTCCGCGAGTACCCACACCAACGTGGTCTCATGCCC
CCATTGCCATGGCCCGGTGTGGGATCTGAGGGCAGTGTAAGAGGCGATGT
AGAGCATGAGGACAGGTTGGGGCCTCGGGGCTCGGGAGCGGAGGGCGTTT
TGGCGCACATGTTCGGGCACATGCTGGATGGAGCTTTGCAAAACTTTAGT
GGCGGGCGCTGGGATGGTAATAGTGCATTCGGAGATCTGTTGGGCAAGGT
TTTGCCCCCCCTTTTTCCTCCCTCGCACTACGATGAAGGCTGCCAGCGGC
AAGAACCATATCGCGTCCCGCGACCCCCCCCATCTCTTCCCCCGGGGCCG
CCACCAAGGGGGTTCGGCGAGCGACGAGAAGGGCGACGTGACAGAGATTT
AGAGGGGCACAGCCATGTTCTTGACAATGCTTGGCAAAGGCGTGGGTGGA
TTGATTTGTTGCAGATGGCTCCCTAAATGGACGGTTCGGGCAGGGACCAC
ATGCATGCCGCCATCCAAGAAGACCAAAGAGAGCATCCGCAGTGCTCCTA
CTCTACAGTGCGCTCCCATTTCTCTTCCTTTCTCAATGGGAGTAGTAAGG
CCGAGACATTAACAAAAATTATTCGCAATTGCCAAG back to top
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