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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100014g63.9273.mrna |
| Orig protein id | gnl|cribi|Naga_100014g63.9273 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:971025..972791 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4585 ID=rna4585|Name=rna4585|organism=Nannochloropsis gaditana|type=mRNA|length=2866bp
AGATTTGTACCATCGAAAATCAGGTGCCATGAAGCTCGGGCAATGGTAGG
CGTTCCTGGTCAAGGGAGCGACACTACCTGAGTGCCGGTGCGTCCTCAAA
AGAAGTTTGTTGAACTTTATAATGACAACTATTCCAAACCATACTCGATT
CTTTTGAAGGAAACTTATTATGACCAGTCTGCCATGCGCCTCCCGTCCTC
TATCACGTGTGGTTGGAAAGACACGGACCGAAGAAGAGCAGGCAGAATGT
GAGGCTTCTTGCACCTCTCTTTTGAATTCATGGTGTAATCTCGACCAGGT
GAGTGTACGGTCGAGTGTCTATCGACTTTCAAGTATTTTTACACATACGG
CAGAACTCCAGCAAGAATACGCATCTAGCTGTCAGACCGTGGCAAGATTG
ACAATTCTAAGTGCCTCGCGTAATTTTTGCTGTTTACAACAACTAAGTTC
ACATCGAACACGCCCTAACAACCCCAAAACTTGTTATCATACCTGTCATT
ATCTGATTCATTATTTGTTAGTCTTCACGCGGAAAGCTTCAAGCCTCTGG
TCTATTCAATGATAGCGGGGACATACGCCTTCTTCGGGAAAGACATGTCG
CGTATCTTATGAAGGGACTTACACACTTAGGGCCTGGCTTTATCTGTCTT
GACGCGAGCCGACCATGGCTGTGTTATTGGATTCTCCACTCTCTCGATCT
ACTGCGGGGCCTTGAGTCGAGGAGTCATTCGATTTTTCGCGCTGATTTAG
CTCGGAAAGTCACAATTACAATGAACTCATGCCAAAACTCCGGGGGAGGC
TTCGGTGGCGGACCTTATCAGATATCGCATTGCGCTCCAACATATGCGGC
AGTGCTTGCCTTACTCATACTCGGTACGGAAGAGGCCTATAAGACTATAG
ATCGCCCGGCGCTTTATAAGTGGTTTCTTGCACGAAAACATTTGTCAGGT
GGTTTTTGTATGCACGATGACGGGGAAGTTGACGTTCGGGGCACGTATAC
AGTCATTTCGATAGCTTCGATGCTGAATATGTTGACCCCCCAGCTAGCTG
CGGGCGTTGTCGAATACCTCCTCTCCTGTCAAACATATGAGGGTGGCTTT
GGAGGGGAAACTGATCAAGAGGCACACGGCGGATACGTATTCTGTGCGTT
TGCCGCATTGATTATTTTGTCTGAGACAGATGGTGTAGATCTTTTTTCTT
TACAGGGGTGGATTGCTCGACGTCAAATGAGCGTAGAAGGCGGTTTCCAG
GGACGGACAAATAAACTTGTGGATGGTTGTTATTCCTTTTGGCAAGGAGC
CACAGCGATTTTAGTTGAGATGGCTCTACATGGGGAAACAGAGACAAGAA
AGGTTGTGGGTTGGAGGAAAGAGAATGACGGAAGAATCGTGCTCTGCGCT
CCGCAATCTTACACTGAAGATCTGAGAGACTCTGGAGTCTCTGGAAAGGA
CTTTGGTGACACTACAGATCTCCGCTCAGTATGTCCAAGGGAAACTGCGA
TGAAAAGTGACATGCCCAATATTGAGCCATCGTGTCATGTTGGAGGAAAC
TTGGAATGTCTAAGTCAACATGCGCTCCAGCGTTATATCCTTCATTGTGC
TCAGGCTCTTGACGGTGGACTCCGCGATAAGCCGGACAAACCGCGTGACT
TTTATCATACGTGCTACAATCTTTCAGGATTGAGCTGTGCCCAATGGGGT
CAAATGGACTCCTTGAAGGAATCAAAAAATGCGAGAGGTCTCAATCCTTG
CGGACACCCGCTTGTGTACGGTGATATCGGAAACCTGTTGGAAATCACAA
ATCCAATCTACAATATCCGGCAAGATAAAGTGGACCGAGCCCTTCGGTTT
TTCTACCGGGAAGGGCCTGAATCGCACGAGGTATTGCTTCTATGAAAAAC
GAAAACATGGAAGAGGTGCAGGGTTTCATATACCTTACCGCGTTTGGAGA
AGAAATGTAATATGTATAATTGCGGTAAGCATTTGTCACATCGTTGGATC
TATCAAATTCCTCGCAGATTTTTAGAGTGTAAAAACCCCAAGAGAAGTAG
CAAGTAGCCTTGCATTGCTTAAGGAGCTCTTGCGCTTCCGTCTGATGGAT
TTTGTGACCGTACACCAAATTGTCTCTTTTTCTGCACGATTGTTTCTTTT
TCATGGTCAAGACCATTGTATGTGATTATTTCCATGGTTTTCATACATAT
AGGATACCCTTCCCATGCGAAATGGAGACAGAAAGGATGTTTCCCTCATT
TCTGCCTTCTTCACAATTCCTCTCACTCTGGAACTATGCATAGCCTAATT
GCAAAACTGACTAACTCTCTCAGATGTGATTCCCGGTGATTTGGAAACGA
TACTTTTTCCCGTTTGTCTCAAGAATCCCTCAGTAGGCATGTATTCTATT
CTGACTTCTTCCAAATTTCTCAATCACTCTAGTGCAGATTTGAAGTATAG
TCGTGCCGAAATGTGTTGTGCATTCGAACTTCCAGAAACTTCTTGAGTCC
TCAATAGACACTGCATTACCCCCCCTTCACATGACAATGGATTGAATTAT
TGAACTAATTCGTGCGATAGTTGCATTCAAGTGCTGCTCAGAAGAGCGCT
GCACTAGATGATTGTCTAAACGCTCCTTCAAGAGCAAAAGCTCATCAACC
AATGCACCATCATTCCCGCCTTGTGATATTACCTTGTCGATGGCACTCAT
TAGTGCCCGTATGGCCCCTCTATCTGAAATCTTAGATGTCCTTCGCCCTT
CCCTACTCTCACTGCCGCTTGCACTACTCGTGTTACTTTTCGGACCACTA
CCTAATGAGCCTGTGCTGGCTTCTTCCGAGAGGTCAGAGACCAGGTCGCC
GTCACCACACACAGAG back to topprotein sequence of rna4585 >rna4585-protein ID=rna4585-protein|Name=rna4585|organism=Nannochloropsis gaditana|type=polypeptide|length=429bp
MCSISGKSSILLVAVILLSKDITSTRSFRLPLSYVKRVYIPPCNAQAFLP
LLSVSQATSRHSSLLGLIRLPMRVPRTAASDETGLGGRRFLVSTEMGTAS
GRETTPDFAQSKSSDSMGNEGNLTISEPLQYTTEEATLVETKIDGMLTRK
IDLWPPEEIFELLPLLLKSSVFEYAIDKRLEQDLRLDGTPLVPSLGRPES
KFRRRLEHSRSFLASLKYSEQQRLARQWIEGLLEAATESTEAMDERVFEL
LTYENGVLVEPVQEALEDMLRRLRSMSPDEKTLTQAVLETLQKRVEAEVR
TRETPFVRLLALLLRLHSRDDRERVLRTELRNSRVIEEFAAYLEEGADYV
ARLRLGPCSLPEDTSDEMQKILAILRDFTQTGAGEGAQGWTRGAAPSVQP
SFQPRPEDIGRRAVVDVEEVREGGEGTPS back to topmRNA from alignment at CM002463.1:971025..972791+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4585 ID=rna4585|Name=rna4585|organism=Nannochloropsis gaditana|type=mRNA|length=1767bp|location=Sequence derived from alignment at CM002463.1:971025..972791+ (Nannochloropsis gaditana)
CACGCAGCTTCTTCATTCATGTGCTCTATATCTGGAAAGAGTTCGATACT
GCTAGTGGCTGTCATTTTACTGTCAAAAGATATCACGTCCACCAGATCCT
TCCGGCTGCCTTTATCATACGTCAAACGCGTATACATTCCTCCATGCAAT
GCTCAAGCATTCTTGCCACTACTATCCGTTTCTCAAGCTACCTCACGTCA
TTCGAGCCTGCTGGGCCTGATAAGATTACCTATGAGGGTGCCACGGACTG
CTGCATCCGATGAGACTGGGCTCGGTGGACGTCGGTTCCTTGTGTCAACT
GAGATGGGGACCGCCAGTGGACGAGAGACCACGCCTGATTTCGCTCAGAG
CAAAAGCAGCGATTCTATGGGAAACGAGGGCAATCTCACCATTTCTGAGC
CACTGCAATATACTACTGAAGAAGCTACCCTGGTGGAAACTAAAATAGAC
GGCATGCTTACCAGGAAAATCGATTTGTGGCCGCCTGAAGAAATATTTGA
ATTGCTGCCATTGCTGTTGAAGGTGAGAGCTGGTGAAGAGGTGATATAAT
TTCCTCCGTTGAGACATATGGAAAGAGGACTTGACCTTGCGATTGATCGA
TGAACGAGGCGAGGCATAAAGTTCGAGACCAGACGTCTttagagaaaggg
aaagtagCATGTATTGATGGCTTCCTGGCACCTCATCAGCACAACATACG
ATTGTCACTGACACACAATTTTTATATCGCAATAGAGTTCTGTTTTCGAG
TACGCCATCGACAAGCGCCTTGAACAAGATCTTCGCTTGGACGGCAcacc
cctcgttccctccctcggtcggCCCGAGAGCAAGTTTCGTCGTCGACTTG
AGCACTCACGCTCCTTTTTGGCGAGCTTGAAATACTCAGAGCAGCAGCGC
CTTGCACGGCAATGGATCGAAGGGCTGTTAGAGGCAGCGACTGAGAGCAC
GGAGGCCATGGACGAGCGGGTCTTCGAGCTGCTCACGTACGAGAATGGCG
TGTTGGTGGAGCCCGtgcaggaggcgctggaagaCATGCTCCGTCGGCTC
CGGTCCATGTCGCCCGACGAGAAAACACTGACCCAAGCCGTCTTGGAGAC
CCTGcagaagagggtggaggccgaggtCAGGACACGGGAGACGCCCTTCG
TCCGGCTCTtggccctgctcctccggctccacTCTCGAGACGATCGTGAG
CGAGTGCTGCGAACTGAGCTCCGCAACAGCCGCGTAATTGAAGAGTTCGC
GGCATacctggaagagggagcggactACGTGGCTCGACTGCGGCTAGGgc
cttgctcccttcccgaGGACACCTCAGACGAGATGCAGAAAATCCTGGCG
ATCCTACGAGACTTCACGCAAaccggggcgggggagggcgcgcaAGGCTG
GACGAGAGGAGCGGCGCCTTCTGTTCAACCCTCTTTCCAGCCGAGGCCAG
AGGACATTGGTaggagggcggtggtggacgtggaggaggtccgcgagggt
ggagaggggacTCCGTCGTAAGTTTAGGGCCAGAAAAGAAAGATTCATGT
GAATGAGAGATGTACAGAAGCACTGTCGTAAGCAATGGGTAACAGCCGTA
CCAGCGAGCAATTATGGTACCCGCGTTTGTACATCATCCTCTTCGTTTGA
TACATAATCCCGGGGTTAGGGAGCCATCTGCAACAAATCAATCCACCCAC
GCCTTTGCCAAGCATTGTCAAGAACATGGCTGTGCCCCTCTAAATCTCTG
TCACGTCGCCCTTCTCG back to topCoding sequence (CDS) from alignment at CM002463.1:971025..972791+ >rna4585 ID=rna4585|Name=rna4585|organism=Nannochloropsis gaditana|type=CDS|length=2580bp|location=Sequence derived from alignment at CM002463.1:971025..972791+ (Nannochloropsis gaditana)
ATGTGCTCTATATCTGGAAAGAGTTCGATACTGCTAGTGGCTGTCATTTT
ACTGTCAAAAGATATCACGTCCACCAGATCCTTCCGGCTGCCTTTATCAT
ACGTCAAACGCGTATACATTCCTCCATGCAATGCTCAAGCATTCTTGCCA
CTACTATCCGTTTCTCAAGCTACCTCACGTCATTCGAGCCTGCTGGGCCT
GATAAGATTACCTATGAGGGTGCCACGGACTGCTGCATCCGATGAGACTG
GGCTCGGTGGACGTCGGTTCCTTGTGTCAACTGAGATGGGGACCGCCAGT
GGACGAGAGACCACGCCTGATTTCGCTCAGAGCAAAAGCAGCGATTCTAT
GGGAAACGAGGGCAATCTCACCATTTCTGAGCCACTGCAATATACTACTG
AAGAAGCTACCCTGGTGGAAACTAAAATAGACGGCATGCTTACCAGGAAA
ATCGATTTGTGGCCGCCTGAAGAAATATTTGAATTGCTGCCATTGCTGTT
GAAGAGTTCTGTTTTCGAGTACGCCATCGACAAGCGCCTTGAACAAGATC
TTCGCTTGGACGGCAcacccctcgttccctccctcggtcggCCCGAGAGC
AAGTTTCGTCGTCGACTTGAGCACTCACGCTCCTTTTTGGCGAGCTTGAA
ATACTCAGAGCAGCAGCGCCTTGCACGGCAATGGATCGAAGGGCTGTTAG
AGGCAGCGACTGAGAGCACGGAGGCCATGGACGAGCGGGTCTTCGAGCTG
CTCACGTACGAGAATGGCGTGTTGGTGGAGCCCGtgcaggaggcgctgga
agaCATGCTCCGTCGGCTCCGGTCCATGTCGCCCGACGAGAAAACACTGA
CCCAAGCCGTCTTGGAGACCCTGcagaagagggtggaggccgaggtCAGG
ACACGGGAGACGCCCTTCGTCCGGCTCTtggccctgctcctccggctcca
cTCTCGAGACGATCGTGAGCGAGTGCTGCGAACTGAGCTCCGCAACAGCC
GCGTAATTGAAGAGTTCGCGGCATacctggaagagggagcggactACGTG
GCTCGACTGCGGCTAGGgccttgctcccttcccgaGGACACCTCAGACGA
GATGCAGAAAATCCTGGCGATCCTACGAGACTTCACGCAAaccggggcgg
gggagggcgcgcaAGGCTGGACGAGAGGAGCGGCGCCTTCTGTTCAACCC
TCTTTCCAGCCGAGGCCAGAGGACATTGGTaggagggcggtggtggacgt
ggaggaggtccgcgagggtggagaggggacTCCGTCGTAAATGTGCTCTA
TATCTGGAAAGAGTTCGATACTGCTAGTGGCTGTCATTTTACTGTCAAAA
GATATCACGTCCACCAGATCCTTCCGGCTGCCTTTATCATACGTCAAACG
CGTATACATTCCTCCATGCAATGCTCAAGCATTCTTGCCACTACTATCCG
TTTCTCAAGCTACCTCACGTCATTCGAGCCTGCTGGGCCTGATAAGATTA
CCTATGAGGGTGCCACGGACTGCTGCATCCGATGAGACTGGGCTCGGTGG
ACGTCGGTTCCTTGTGTCAACTGAGATGGGGACCGCCAGTGGACGAGAGA
CCACGCCTGATTTCGCTCAGAGCAAAAGCAGCGATTCTATGGGAAACGAG
GGCAATCTCACCATTTCTGAGCCACTGCAATATACTACTGAAGAAGCTAC
CCTGGTGGAAACTAAAATAGACGGCATGCTTACCAGGAAAATCGATTTGT
GGCCGCCTGAAGAAATATTTGAATTGCTGCCATTGCTGTTGAAGAGTTCT
GTTTTCGAGTACGCCATCGACAAGCGCCTTGAACAAGATCTTCGCTTGGA
CGGCAcacccctcgttccctccctcggtcggCCCGAGAGCAAGTTTCGTC
GTCGACTTGAGCACTCACGCTCCTTTTTGGCGAGCTTGAAATACTCAGAG
CAGCAGCGCCTTGCACGGCAATGGATCGAAGGGCTGTTAGAGGCAGCGAC
TGAGAGCACGGAGGCCATGGACGAGCGGGTCTTCGAGCTGCTCACGTACG
AGAATGGCGTGTTGGTGGAGCCCGtgcaggaggcgctggaagaCATGCTC
CGTCGGCTCCGGTCCATGTCGCCCGACGAGAAAACACTGACCCAAGCCGT
CTTGGAGACCCTGcagaagagggtggaggccgaggtCAGGACACGGGAGA
CGCCCTTCGTCCGGCTCTtggccctgctcctccggctccacTCTCGAGAC
GATCGTGAGCGAGTGCTGCGAACTGAGCTCCGCAACAGCCGCGTAATTGA
AGAGTTCGCGGCATacctggaagagggagcggactACGTGGCTCGACTGC
GGCTAGGgccttgctcccttcccgaGGACACCTCAGACGAGATGCAGAAA
ATCCTGGCGATCCTACGAGACTTCACGCAAaccggggcgggggagggcgc
gcaAGGCTGGACGAGAGGAGCGGCGCCTTCTGTTCAACCCTCTTTCCAGC
CGAGGCCAGAGGACATTGGTaggagggcggtggtggacgtggaggaggtc
cgcgagggtggagaggggacTCCGTCGTAA back to top
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