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Properties
| Property Name | Value |
|---|
| Product | long chain acyl-coa synthetase |
| Orig transcript id | gnl|cribi|Naga_100014g59.9287.mrna |
| Orig protein id | gnl|cribi|Naga_100014g59.9287 |
| Gene | LACS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:963016..965911 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4581 ID=rna4581|Name=rna4581|organism=Nannochloropsis gaditana|type=mRNA|length=2986bp
ACGTACTGCACGTGGCATCTCCTTCAAATACTGCCTTTTTTCCCCCCGTT
CCTGACGTGACAGGCGCATCTGCCCCCGAACCTCCCCCCGGCCCCGCCTC
GCCCTTCAAGTCGGGGGACATGGGCAAAGGGTGGCGGCGCAAGAGGCAGA
AGAAGAACCATCAGAACCTGGAAGACAAAGCCTCTGGGACTGGGAAGAGT
AAAAGGAGTGTCGACGGTGAGAATGTCAATGGAAGAGGTGATGGCTGGAT
CGTCGCAAGGGATCCGAGCTCAGGAAAAAACATCGTCCCGGGCAGCCCTG
TCTTCGAAGCCTACTACCAGGCCCAGAGCATAGTTGAGCCCGGTGTGGAA
TGGAAGAAATTTATGGAGACTCTGGCCATGCCATTACCAGCATCATTTCG
AGTAAATTTGGATTGTGATTTTACTGAAATGCTTGTGAATGAGATCGAAA
CACACGTAGCCCGCCGCATTCATGTCAACGGCAAAGAAATGGCTCCTATC
AAGCGCCTTGAATTCTTTCAGGGAGGTCACGCCTACCAAATGGCCATCGA
TCGGCATACATTGCGGAAAGACTCGTCTCTTGCGGAATTCCATGAGCTCA
TGAAAACGCATACAGAGGCCGGCACCATCACGCGGCAAGAAACGGTGTCT
ATGATCCCACCCGTGGTCCTGGGCGTTCAGCCCCACCACAAGGTCCTGGA
TATGTGCGCGGCTCCTGGTTCGAAAACGTCGCAAATGCTTGAGACCCTTA
GCAGAGGATGTTCGCGCACGGGGCAGGAGCCGAGCGGGTACATCGTCGCC
AATGATTCGGACACGGCGCGGGCCTACATGCTAGTGCATCAATGCAGGCG
CATCAACACCGTGGCCCTCTGTGTCACAACCCATAAAGCGCAGCTATTTC
CAGCTCGAGGCTTGGGTAGAAAAGAGCCGGCTGTTGAGGCTGAAAACCCT
GACTGGGACGTGCCCCGGGTGGCGCTTGGATACTTCGACCGCATCCTCTG
TGACGTCCCCTGCAGTGGCGACGGCACCGTTCGCAAGACCTTCAATATCT
GGAGGACGTGGTCGCCGGGCCAGAGCTTGGGGCTTCATCCCATGCAATAT
GTGATCGCCCGACGGGGCGCAGCTCTCCTGAAAGTGGGTGGCCTCATGGT
GTACTCCACCTGCACGCTGAACCCGATCGAGAACGAGGCGGTGGTCCTCT
CCCTCCTGCAGGACAGCGAGGGAGCGCTCGAGCTGGTCGATCCTCGCCCG
CTCGTCCCGGGCCTTATAGTTCGGCCTGGCCTACATTCTTGGAGGGTCAT
GGAGTCCACAAGTCGGCTGCAAGCAAATGGACATGTTGCGCCGGACGAGG
AAGACCAAGGTGCTGAGGGGGAGCAGGAGGTAGAAAGGACGCTGAGGGAC
TCCGGTTTGACGCTCTTTCGATCCTACGAGGATGTTCCAGAGCCCTACCG
CCGATGGATTCGACCCTCTTGCTTCCCTCCCAAAGATCCAGCTGTAGCAG
AGCGCCTTAAGTTGCACTACTGTATGCGCTGTCTGCCTCACGACCAGGAT
ACAGGCGGATTCTTCATCGCCCTTTTCAAAAAAACGAGGCCGCTACCTAA
GCCGGGAGCAGGGAAATGTGCTGACGGAGGAGATGCGGAGGGAGTTTTGG
ATGTTGAAGAGGTGGTTTTGGAGACAGGGAAAGAAAAAGATTCTATCGAG
GGTCGAAGCATGTCCTCGGTGGACCAAGGAGCGACATCTTCCTCTGCTGC
CCCAGACGCCGAGACCGAAGCGTCAGATTACGTGGTTCACGATGCTCCAA
CGTCTTCCGTCTTGACGACTCCGCTCCAGCAAGAACAGCAGCAAGCACAG
AAAGAGCGGAGAAGCCAAACACGGAAGACTTTTGTTCCTAAAGAATTTTT
CGTTCCATTGGCGGATGATGGATGGGCATCAATTAAAGAGTTTTACGGCG
TAAAAGAGGGATTTCCTCGCGATCGCCTCTTTTTGCGTCGGGATGGCTCG
AAAGTGGTAATCCTTCTTTCCCAAGGCTTAGTGGAGGACGTGCAGCTTTC
CACGCGTTGTCAGCTTCAACTTGTGAATGCGGGAACTCGTATTTTTGACC
GGGCGAGCACCGACCGTTCAGCGTGTGCTTACCGTCTTTCACAAGACGGA
ATGCCCTATATGCTTCCGTATTTAAATAAGCGCGTCGTCCAGGTTGGACC
GACGGCGCTGGCTGCCATGACAGTCTACGGCTATTTAGACTTGGATTTGC
TAGGGCCAATGCAACGGCCGCTGTTAGAGGATATGGAAATGGGTTCATTT
GTAGCCGTGCTGGAACCGACCTGTCTTGCAGGAGTAGCGAAAATGATGGA
AGCGGGTATCGCCAGCTTCGCACTCATGTGCTGGAGGGGCTTCGGGCAAA
AGATGAATGTCATGTGCATCGCACACGACCTCTTCATTTTCCAATGCCGC
CTGAAGGCCGCCAGGCTCGTCTCTGAAGCTCAGTTAGTCGAAATGCGCGA
GACGAAATCTCGCCTGCAACTAAAGCATGCGAATGCCAAGGGCGAAGGGC
AGAACTTGAAGGTAACGGAAGATATCGAGCAAGCTTGTGGAAAAGAGATG
GAGACTTAGATACTACGTGACTGATTGCGGGCGCATTTCAAATCTTAATA
CTTCACAAATGAGAGGTGAAAACGTTGCATCGGAACCACACATTCGCCTC
TTCTTTCTCGGATCCATGCTTATAAGTGGGTTTAAAAGTAGGCTTTCAAA
GCTCGAGGTGTGTGATTTCAGTCAAGCAGATAAATTTGTCTTCCTGACGT
CGCTTCCTCCATTCTCCATCTGAAATTCTTTTTAAAGTCAGTGCAATGAC
ACCTCTGAAAAATCCCTTCCAAACGACATCAAACGATACCTCACGAGACC
CGATACTTTGCATCTTCCAGATACAATGCAAACGGGTCAAGAGCGTAGCC
CTCCTCTACCACAGGGTCCTACGGCGGAATACTACC back to topprotein sequence of rna4581 >rna4581-protein ID=rna4581-protein|Name=rna4581|organism=Nannochloropsis gaditana|type=polypeptide|length=649bp
MPKYTTTVASGEVDLRIEKEGPGSWAPKTVFQVFEETVKKYGDSPALHYK
KVPHGGSLATTEWSSYTWREYYDLTLEFCKSLLSLGFPAHGAINLIGFNS
PEWLIANCGAIAAGGVGVGIYTSNGVDACKYITEHSEAEVVVVENAKQLE
KYLKIAKELPRLKALVIYSGTAEGYKCDVPIYSWKDFMALGSGVKDEAVR
ARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVKNFVASLPFTLT
CEDRSVSYLPLSHVAAQMLDIHCPIATGAKIYFAQPDALRGSLPVTLKDV
CPTYFFGVPRVWEKIYEKMQEVARSTTGVKRALAQWAKAKGLEKNRRQQY
GCGGGAPVGFGCAHALVLSKVKAALGLHQTKMCITSAAPIAVEILEYFAS
LDIPVLELFGQSECTGPHTSNFSYAWKIGSIGRDIPGVKTKQHANMSEFC
MYGRHIMMGYMKMEDKTQEAVDNEGWLHSGDVAQVDADGFWSITGRIKEL
IITAGGENIPPVLIENEIMSALPAVANCMVVGDKKKFLTVLLTMKAKLDD
QGNPTKELNKEALDIGKEIGSNASTTEQVASDPHWKKYFDEGLKKANSTA
TSNAQFVQKWSVLPLDFSEKGGELTPTLKLKRSVVAEKYADVIADMYKA back to topmRNA from alignment at CM002463.1:963016..965911- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4581 ID=rna4581|Name=rna4581|organism=Nannochloropsis gaditana|type=mRNA|length=2896bp|location=Sequence derived from alignment at CM002463.1:963016..965911- (Nannochloropsis gaditana)
GGCGTTTGCCGGGGGCACACGCGTTTTCGTGCTCCCTTTTACTTTACGTT
GGGTTTCACTCAGTCTGACTACGTATGCGCGCGTGTAAAAGCGGAGCAGA
GTGGGGTGGCCGGGAAGGAAACCAAGAAGGAGGAGGAGAGAAGAAATCCT
GACGCGGATTGGTAGGAAATGGCGTGCCGAGCGAATTCTCTCTCCTTGGA
CCCGCCAGACATTCCATCCGCGACATTTTTGTTATGATTTGTACGAATGA
GGTGGATTTTCCAGGCATTCTTCACTTTTGTGCTCTCACGCTGACCTTCT
CCTCTCTATCCCGTGGCAGCAGGTCTGCACTTGCAAGTACCGGTGAACCG
GAAAGTGCCATTTGGCTCCACATCGACTTCAGATCAAACTTTTAGCTTGC
ACAAGCTCGAGATCGATAGGCATGCCCAAATATACTACGACGGTGGCCTC
TGGTGAAGTAGATTTGCGCATTGAGAAGGAAGGACCGGGTTCGTGGGCGC
CGAAGACCGTGTTTCAGGTGTTCGAGGAGACGGTGAAAAAGTACGGCGAC
TCCCCAGCTTTGCATTACAAGAAGGTACCGCATGGCGGCAGCCTTGCGAC
AACTGAATGGAGCAGTTATACGTGGCGCGAGTACTACGATCTCACCTTAG
AATTCTGCAAAAGTCTTTTGTCTCTAGGATTTCCTGCGCATGGTGCCATT
AATTTAATCGGTTTCAACTCCCCCGAATGGCTCATTGCCAACTGTGGCGC
TATCGCAGCCGGTGGTGTGGGAGTCGGTATTTACACGTCTAATGGCGTTG
ATGCGTGTAAATACATTACGGAGCATTCTGAGGCGGAGGTAGTGGTTGTG
GAGAACGCGAAACAGCTTGAAAAATATCTGAAGATTGCCAAAGAGCTTCC
CCGACTTAAGGCTCTTGTAATTTATAGTGGCACAGCTGAAGGCTACAAGT
GTGACGTCCCTATATACTCGTGGAAGGATTTTATGGCTCTCGGGAGCGGC
GTTAAGGATGAAGCTGTTCGCGCGCGCATCGAAGCCCAGCGGCCCGGGCA
CTGTTGCACGCTAATCTATACATCTGGCACTACGGGGCCGCCCAAGGCCG
TCATGATCTCGCACGACAATCTGACTTGGACTGTGAAGAATTTTGTGGCC
TCCTTGCCCTTCACCTTGACGTGCGAGGATCGCTCGGTCTCTTACCTTCC
CCTCTCCCACGTCGCCGCCCAGATGCTGGACATCCATTGTCCAATTGCCA
CGGGCGCCAAGATCTACTTCGCGCAGCCGGATGCGCTGCGCGGATCATTA
CCTGTCACCTTGAAGGACGTCTGTCCGACTTATTTCTTTGGGGTGCCGCG
CGTGTGGGAGAAGATCTACGAGAAGATGCAAGAAGTAGCCCGCTCGACCA
CGGGTGTCAAGCGAGCTCTTGCGCAGTGGGCCAAGGCCAAGGGACTGGAG
AAGAACCGCCGTCAGCAGTATGGGTGCGGTGGTGGTGCTCCGGTGGGATT
TGGGTGTGCCCACGCACTGGTCTTGTCAAAAGTGAAGGCGGCGCTAGGCC
TTCATCAGACCAAGATGTGCATCACGTCCGCCGCGCCCATCGCAGTCGAG
ATTCTCGAGTACTTTGCCTCCTTAGACATCCCTGTGCTAGAGCTTTTTGG
CCAGTCTGAATGCACAGGTCCTCATACGTCCAATTTCTCCTACGCGTGGA
AAATTGGCTCAATCGGGCGCGACATCCCGGGAGTCAAGACGAAGCAACAT
GCAAATATGAGCGAATTTTGCATGTACGGGCGACACATCATGATGGGTTA
CATGAAGATGGAAGATAAGACTCAGGAGGCCGTTGACAACGAGGGCTGGC
TGCATTCGGGCGACGTTGCGCAAGTTGATGCTGACGGCTTTTGGAGCATC
ACAGGCCGCATTAAAGAGCTCATTATCACAGCAGGGGGGGAGAACATTCC
TCCTGTTCTGATCGAGAACGAGATTATGTCCGCTCTCCCGGCTGTTGCCA
ATTGCATGGTTGTGGGGGATAAGAAGAAATTTTTAACTGTTCTTTTAACG
ATGAAGGCTAAGCTTGACGACCAGGGTAACCCCACGAAGGAACTGAACAA
GGAAGCGCTGGACATTGGCAAGGAAATCGGCTCGAATGCTTCGACCACTG
AGCAGGTTGCATCCGACCCTCACTGGAAAAAATATTTTGATGAGGGGTTG
AAGAAAGCGAATTCCACCGCGACATCCAATGCGCAATTTGTGCAGAAATG
GAGTGTTTTGCCCTTGGACTTCAGCGAAAAGGGAGGCGAGCTAACACCGA
CGCTCAAACTGAAGCGCTCTGTGGTTGCGGAGAAGTACGCTGACGTCATT
GCCGATATGTACAAAGCGTAGGCGATGTCACACTAGAGAGGGTGGTGAAA
CAGAATTGCGAGATTTACACCATGTAACTTTTGAAGCAATAAGAGAACAA
AATTATTCGATGGAAAAATTAGAAGTGGGGGGATCTCCAGCAGGTGTTGC
TCATTAAATCTAGGTGAGCCTTGTGGGTAGTATTCCGCCGTAGGACCCTG
TGGTAGAGGAGGGCTACGCTCTTGACCCGTTTGCATTGTATCTGGAAGAT
GCAAAGTATCGGGTCTCGTGAGGTATCGTTTGATGTCGTTTGGAAGGGAT
TTTTCAGAGGTGTCATTGCACTGACTTTAAAAAGAATTTCAGATGGAGAA
TGGAGGAAGCGACGTCAGGAAGACAAATTTATCTGCTTGACTGAAATCAC
ACACCTCGAGCTTTGAAAGCCTACTTTTAAACCCACTTATAAGCATGGAT
CCGAGAAAGAAGAGGCGAATGTGTGGTTCCGATGCAACGTTTTCACCTCT
CATTTGTGAAGTATTAAGATTTGAAATGCGCCCGCAATCAGTCACG back to topCoding sequence (CDS) from alignment at CM002463.1:963016..965911- >rna4581 ID=rna4581|Name=rna4581|organism=Nannochloropsis gaditana|type=CDS|length=1950bp|location=Sequence derived from alignment at CM002463.1:963016..965911- (Nannochloropsis gaditana)
ATGCCCAAATATACTACGACGGTGGCCTCTGGTGAAGTAGATTTGCGCAT
TGAGAAGGAAGGACCGGGTTCGTGGGCGCCGAAGACCGTGTTTCAGGTGT
TCGAGGAGACGGTGAAAAAGTACGGCGACTCCCCAGCTTTGCATTACAAG
AAGGTACCGCATGGCGGCAGCCTTGCGACAACTGAATGGAGCAGTTATAC
GTGGCGCGAGTACTACGATCTCACCTTAGAATTCTGCAAAAGTCTTTTGT
CTCTAGGATTTCCTGCGCATGGTGCCATTAATTTAATCGGTTTCAACTCC
CCCGAATGGCTCATTGCCAACTGTGGCGCTATCGCAGCCGGTGGTGTGGG
AGTCGGTATTTACACGTCTAATGGCGTTGATGCGTGTAAATACATTACGG
AGCATTCTGAGGCGGAGGTAGTGGTTGTGGAGAACGCGAAACAGCTTGAA
AAATATCTGAAGATTGCCAAAGAGCTTCCCCGACTTAAGGCTCTTGTAAT
TTATAGTGGCACAGCTGAAGGCTACAAGTGTGACGTCCCTATATACTCGT
GGAAGGATTTTATGGCTCTCGGGAGCGGCGTTAAGGATGAAGCTGTTCGC
GCGCGCATCGAAGCCCAGCGGCCCGGGCACTGTTGCACGCTAATCTATAC
ATCTGGCACTACGGGGCCGCCCAAGGCCGTCATGATCTCGCACGACAATC
TGACTTGGACTGTGAAGAATTTTGTGGCCTCCTTGCCCTTCACCTTGACG
TGCGAGGATCGCTCGGTCTCTTACCTTCCCCTCTCCCACGTCGCCGCCCA
GATGCTGGACATCCATTGTCCAATTGCCACGGGCGCCAAGATCTACTTCG
CGCAGCCGGATGCGCTGCGCGGATCATTACCTGTCACCTTGAAGGACGTC
TGTCCGACTTATTTCTTTGGGGTGCCGCGCGTGTGGGAGAAGATCTACGA
GAAGATGCAAGAAGTAGCCCGCTCGACCACGGGTGTCAAGCGAGCTCTTG
CGCAGTGGGCCAAGGCCAAGGGACTGGAGAAGAACCGCCGTCAGCAGTAT
GGGTGCGGTGGTGGTGCTCCGGTGGGATTTGGGTGTGCCCACGCACTGGT
CTTGTCAAAAGTGAAGGCGGCGCTAGGCCTTCATCAGACCAAGATGTGCA
TCACGTCCGCCGCGCCCATCGCAGTCGAGATTCTCGAGTACTTTGCCTCC
TTAGACATCCCTGTGCTAGAGCTTTTTGGCCAGTCTGAATGCACAGGTCC
TCATACGTCCAATTTCTCCTACGCGTGGAAAATTGGCTCAATCGGGCGCG
ACATCCCGGGAGTCAAGACGAAGCAACATGCAAATATGAGCGAATTTTGC
ATGTACGGGCGACACATCATGATGGGTTACATGAAGATGGAAGATAAGAC
TCAGGAGGCCGTTGACAACGAGGGCTGGCTGCATTCGGGCGACGTTGCGC
AAGTTGATGCTGACGGCTTTTGGAGCATCACAGGCCGCATTAAAGAGCTC
ATTATCACAGCAGGGGGGGAGAACATTCCTCCTGTTCTGATCGAGAACGA
GATTATGTCCGCTCTCCCGGCTGTTGCCAATTGCATGGTTGTGGGGGATA
AGAAGAAATTTTTAACTGTTCTTTTAACGATGAAGGCTAAGCTTGACGAC
CAGGGTAACCCCACGAAGGAACTGAACAAGGAAGCGCTGGACATTGGCAA
GGAAATCGGCTCGAATGCTTCGACCACTGAGCAGGTTGCATCCGACCCTC
ACTGGAAAAAATATTTTGATGAGGGGTTGAAGAAAGCGAATTCCACCGCG
ACATCCAATGCGCAATTTGTGCAGAAATGGAGTGTTTTGCCCTTGGACTT
CAGCGAAAAGGGAGGCGAGCTAACACCGACGCTCAAACTGAAGCGCTCTG
TGGTTGCGGAGAAGTACGCTGACGTCATTGCCGATATGTACAAAGCGTAG back to top
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