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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g21.1804.mrna |
| Orig protein id | gnl|cribi|Naga_100003g21.1804 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1142713..1145663 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna458 ID=rna458|Name=rna458|organism=Nannochloropsis gaditana|type=mRNA|length=2734bp
GTCTGCAACAGGAATACTTTTGGCATAGAACAAGCATGCCGGATTCCGGC
TCGCCTCTGGAAGCACGGGGAACAGCAGCCACTGCAACGCCGGTGCTCAT
AAAACCGGATGTTTGCTCGGATGAGGTTGTCTCTGCGGCAGGCTCTACGA
CCTATCCTGTCGGAGGATCGAGCACCCAAAGTATACCAACGTCTTCCTCC
CCCACAAAGCAGCTGAGAGGCCCTCCGTTCGGGGTCTTAAAGACTGGAAA
TCTGCTCAAGAGGAATCCCAACAGACCATTTGATAAGCCCAAAAGACGAT
TTCTCATCTTGACGAGCATAGCTCTTCATTGGTTTAAGCGCGAGGATGGT
TACGATCTGTTCGGAGACGAGCGTGGAAACATTAATCTTTATGACATGTC
AAAGGTGGACCTTTGTGCGATCTTACCCGACAACCCATCATCGCGTGGAG
ATGCTTTCGAGGTCTGCTGCCATCAAGATTCAGTTCATCGCATCTTCCAA
GCGTCATCGCCGGAGGAGGCACGCGCGTGGGTGTCAGCCTTGAAGGGCGC
TATGAAAGCGCGCCCCACGTGTCGGCGCGAGACCCTATCTGGGTTGAGTT
TCTCGCCCCATGGTCACAACTACGACAAAGAACCGCCTTTAGTCTCGGTC
GTTACGGTCAAAAAGGGTGAGGCTGGAGAGGAAGTGGTCTTAGCCAAAGC
GCCGCAGTATCAGTACGGGAAAAACTTCCGGCTGCCCCTTGATCCGATGG
CTTCCTCTCCGCCTCCCTTCTCCCAGACACTGTGCATCTTGTTAAGCAAT
GGAGATTCGGCAGAGGTAAACACAGAGGTACTGAGGAATTGCGAGGTGGG
CGATACCTTACCCGCGCGAGTTAGCTGTCTGAGCGACCAGGTTGCTATGC
TACCTCTCACGCTTAGAGCTAGTTTTGAGGCAAAGACCGGAGCAGCCCCC
GCGACACCGATTTCTCGGCCAGAAGTATTTCTTGTTTCCTCATTATCTGC
CGTCTTTCTGGCTTTGTCCATGGGATGGAACCTTCAGGATGGACAAGGGA
TGGCAAAAGGTCCGGGATGCTTCCATTACGTGGAACGCCTGCTTTTCCTG
GTCCTGGTGGCTTTCACCCTGCTTCGTGCTCTGTGTCCACAGCTGCAGGT
ATATCTGCAGAACCACAATTCTTGGAACAGTAATCACGGGTACACAATGG
TATTAGAAATTTCCGTCGACGACTACGTGGTCGACAGCCGCCGCGGCAAG
AACGCTGAGGAAGAAGAAGCCAACGTTCTCCCTCCCATCCCTGACCGTTT
CATCAATGGCTGCTTTGGGGACATGGCCGAGGCTGAGCGTCGATGGAGAA
TCACCTTGGCCTGGCGCAAGACTTTTGGGACAGATACAATCTTGGAACGC
GAGCATCCGTACTTTGATTTGGTAAAGCAGGCACTACCGGCCTTTTATTG
CGGAACCGCCACGGACGGGAACCCTGTGTACTACGAGAGATCGGGGCAGA
CCGACCTGGCCAAGGCCAAGGAGGTGGGGCTAGACTGGATGGTGTACAGC
TATGTGCACTCCACAGAGTTCGTGTTCAAGGTGTTGCATCCGCGCGAGAC
TGCTCGCACGGTCACAATCTTCGACGTGGAGGGTCTGTCGCTGGGGGACA
TCGCTGGAGATCCGCTGGAATTTATTCGAAGAGCCACACATGTCATGCAG
GAGCACTACCCAGAGCGGTGCCGCGTCATCATAATCTGCAATTGCACGGG
TTGGTTCTCCTTCGTTTGGAAAATTATACGACCTCTCGTTAACGAGACAA
CGCAGCAGAAAGTCAAGGTAACCCATTCTATCCTTTCGGTGCATCACAGC
AGGAATAGGGGATGAGATCTTCCTCTCTTCTTCTCCTATATTCTAAAATG
TGTGTGCTGTTACATGTGCTGTTTGTGTCTTTTAAAAAAAGTCCATTGCC
GCTTTTTGGTTTTGCATCTTGTTTAATAGATCGTCAGCAAATCCGGGACT
TTCAAGGCGATAAACGAATTTGTGGAAGCGGATCAGATTCCAGTCGAGTA
CGGAGGAAGTCTTCGATTTGGTGACGGGGAAGACAGCTGCCGATGGCTAT
GTCCGGAAGAACAACAGTTACGTGAGCATGTTCAGGCGATCAATGAAGGA
TTTAAAGAGGAAAGAGCCGCGAGAGGGGAGCCAGAGCCGGATCGCATGGA
GCCGATCTATGGGGATTGAGTACAAGGGGGGGCGCGGATCGGGGAAAAGG
CAGGGAGGGGTGACATAAAGGCACGACACAAGTTTGCAGGAACAGGCCTT
CACAACGCGGGAAAAGTGGATCCAGAGGAAAAATTCATGGACGAGATCAT
AAGGGAGGTGCATGCGGGCAGTCAGGAGACGACACAAAGGAAAGACAAGA
GGAGGAAAGGGGCTTCTGAAAAACACTTTGAAAAGAGATGGCAATGTCAT
TTTGTGTATGGGCCAAATCCATTTGACAGTCAAGAGTGAAAATTGCATAA
AGAGATGCACGCTGAGATTTGAGTACTAATTGCTAGGATGCTTGGTGCAT
GCGCGATAGGATTGTCTCCCACAAGTCTCGCCTTTGTGACAGCATGACAT
TCATTTCTTATTAAGAAAGCCAAAGGTCACGTCGAGATTGAATATGTCTC
CGCGTAGAAATAAACACATCGCAAGGAGGCATTTAAAGTCCCTGCCAAAA
GTGAAATTAAACTAAATGCACCTTTCTCAACAAC back to topprotein sequence of rna458 >rna458-protein ID=rna458-protein|Name=rna458|organism=Nannochloropsis gaditana|type=polypeptide|length=825bp
MDVDVAALLQEDDEDTSDPPPAPVNPTSPPPPLLLAPRPGGGPRPGLSPG
YYSSNARSAPSSFPTGYNPSQMQQFPQAGQAQGQAQRQQQQQHPNFQPQP
PPNMTTPSQQRQALQQSYHIPAQGFPSQSQPQQQHQQSLRHQQQQQQQHQ
QRQQQQQHHHQQQQPPQLQQPPPPQQQQHQQYHQQNQQQQQQPQPQQQQQ
EYQQQKQRQHFQQQQQQQQQQYQHQQRQQQQPQLQQPQQQYHHQHQQQQQ
QQPSPQQQPRKQQQQQQQQQPQQQQQQQQQQQQLLQQRQLSQQPQHSQQP
TQQSQPQQHLQQRPLHHQQQHQLQQQHQPATPQVQLQQPPGAPAVGSQQS
LRRPAPSQIVQSSHQQQSYPQQQQSPSHQHLQRPSQYQDPATANTTNTHQ
SGNSSANTAGTGSGGPRKASFAECLYRTMLKMDTEKKVSIQEAFRYFKAH
PKLPHVEVQQKLVELLGKDFVSRAWREARRLLEQAGGQRGDGERFSPDKP
PSSRQQHQLPHQEQGAARAPLQQPQGGQVVEALDDLDLINAQQATGEDIE
SDITREADLECIVREEDEGLLEHIQPLRMLSAKEAETWEFKHVMDGELVR
KALRRAERREEERLSARTVRCANGGEKGKLGMGAEDQGRKKLVGEGKGKV
EEKERQEEPEEDESLGRARAVEALSRACQDYATGLLEDLVRLAKQRENED
VRHLVREGATLGAQEPMVVRFLAPYELPGRKNADENEAEEEQEQQGKGQH
RNGEATESLRPEEGHILRRTDVVRYLGRKQRRGRRQGHDRLIDMLATTNV
KRGELSRGASGQAHLRGPSIKGRYS back to topmRNA from alignment at CM002455.1:1142713..1145663- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna458 ID=rna458|Name=rna458|organism=Nannochloropsis gaditana|type=mRNA|length=2951bp|location=Sequence derived from alignment at CM002455.1:1142713..1145663- (Nannochloropsis gaditana)
GCGAATTGACTTGTTTATTTTTAACCTCCTCACCCTCTGCCGCTGGCGGT
TAGGTCGTCGTCCCCCCTCTTCTTTCTGCTCTTCCATCTCGTCATTGGTA
ATGTTTTCCGCCTAATGCTTGGTAGTTGTTTTTCGTTCTTTGCAGGTTAT
TGAGAAAGTTGCAGAGCCTCCTTCTCACGTGAGATCTTGCTTTCTGGTGT
CGTCTTTCATTGTAAGAGCAGCGTCTTCCATTCCGAAGACATCACCCACC
GGCTCTCATTATATCAGAACTTAAGCTGCGAGGGCATATACTCAGCGTCT
CACTCCTTTCCTGTAAATTAAGTGATAGGGTCAACACGCGTGGATCCTTG
TACAGACGGTTGACATGGATGTAGACGTCGCTGCTTTGCTGCAGGAGGAT
GACGAGGACACGAGCGACCCCCCCCCTGCCCCTGTCAATCCCACGTCGCC
CCCCCCCCCCCTTCTACTTGCTCCTCGGCCGGGCGGAGGTCCGCGTCCTG
GGCTTTCTCCTGGGTACTATAGCAGTAATGCGCGGTCCGCTCCTTCAAGC
TTTCCCACAGGGTATAATCCATCCCAAATGCAGCAGTTCCCTCAAGCTGG
GCAAGCTCAGGGCCAAGCACAGCGGCAACAGCAGCAACAGCATCCAAATT
TTCAACCACAGCCACCACCGAACATGACAACACCATCACAACAGCGACAG
GCCCTGCAGCAATCCTATCACATCCCAGCGCAAGGCTTCCCTTCCCAATC
CCAGCCGCAGCAGCAGCATCAACAGTCTCTGCGCCATCAGCAGCAGCAGC
AACAACAACATCAGCAACGTCAACAACAACAACAACATCATCATCAACAA
CAACAACCACCACAACTACAACAACCACCACCACCACAACAACAACAACA
TCAACAATATCATCAACAAAACCAACAACAACAACAACAACCACAACCAC
AGCAACAGCAACAAGAGTACCAGCAGCAGAAGCAGCGACAGCACTTCCAG
CAGCAGCAGCAGCAGCAACAACAACAATACCAACATCAACAACGTCAACA
ACAACAACCCCAACTGCAACAACCACAACAACAATATCATCACCAACACC
AACAACAACAGCAACAACAACCATCACCACAACAACAACCACGAAAACAA
CAACAACAACAACAACAACAACAACCACAACAACAACAACAACAACAACA
ACAACAACAACAACTATTGCAGCAACGGCAGTTATCGCAGCAGCCGCAAC
ATTCACAACAGCCAACGCAACAGTCGCAACCACAACAGCATTTGCAGCAG
CGTCCACTCCACCATCAACAGCAGCATCAGCTTCAGCAGCAACACCAGCC
AGCGACACCTCAGGTGCAGCTCCAGCAACCACCAGGCGCCCCGGCAGTCG
GCTCACAGCAGTCCCTTCGAAGGCCAGCGCCATCCCAAATCGTTCAGTCG
TCTCACCAGCAGCAAAGCTATCCACAGCAACAGCAATCACCGTCGCATCA
ACATCTCCAACGCCCTTCACAATACCAAGACCCCGCCACGGCCAACACTA
CGAACACGCACCAGAGCGGCAACAGTAGTGCTAACACGGCCGGCACGGGT
AGCGGAGGGCCTCGAAAGGCGAGTTTTGCAGAATGTCTCTATCGGACCAT
GTTGAAAATGGACACCGAGAAAAAGGTCTCGATTCAGGAGGCTTTCCGGT
ATTTCAAGGCACACCCTAAACTGCCTCACGTGGAGGTTCAACAAAAGTTA
GTCGAATTGTTAGGCAAAGATTTTGTGTCGCGCGCGTGGAGGGAAGCGCG
GCGCTTATTGGAGCAAGCGGGGGGACAGCGGGGGGATGGGGAAAGGTTTT
CGCCGGACAAGCCCCCGTCTTCCCGACAGCAACATCAGCTACCACACCAA
GAGCAGGGAGCAGCCCGGGCCCCTCTACAGCAGCCACAGGGGGGTCAGGT
GGTGGAGGCCTTGGATGATTTGGATCTGATCAACGCCCAGCAAGCAACGG
GGGAGGATATTGAATCCGATATCACCAGGGAGGCGGACTTGGAGTGTATC
GTGCGGGAGGAGGACGAAGGTCTCCTGGAGCACATCCAGCCTCTGCGTAT
GCTGAGTGCAAAGGAGGCAGAGACCTGGGAATTCAAACATGTTATGGACG
GAGAATTGGTTCGTAAAGCTTTGAGGAGGGCGGAACGTAGGGAGGAAGAG
AGGCTGAGTGCGCGTACAGTAAGATGTGCAAATGGAGGGGAGAAAGGCAA
ACTCGGGATGGGCGCAGAGGATCAAGGGAGAAAGAAATTGGTGGGGGAGG
GGAAGGGCAAGGTGGAAGAAAAAGAAAGGCAAGAAGAGCCCGAGGAGGAC
GAGTCCTTGGGCAGGGCGCGTGCGGTGGAGGCTTTATCCCGAGCGTGCCA
GGACTATGCGACGGGATTATTGGAAGACTTGGTGCGGCTGGCGAAGCAGC
GGGAAAACGAGGACGTGCGACATTTGGTCCGTGAGGGGGCGACATTGGGT
GCGCAAGAACCCATGGTTGTCAGGTTTCTGGCTCCCTACGAGCTACCGGG
AAGGAAGAATGCCGATGAGAACGAAGCGGAAGAGGAGCAGGAGCAGCAGG
GGAAGGGCCAACATAGAAATGGAGAGGCGACAGAGAGTTTGCGGCCCGAG
GAGGGTCATATCCTAAGGCGTACGGACGTGGTTCGATATTTGGGAAGAAA
GCAGAGGAGGGGCAGGCGGCAGGGGCATGATCGGTTGATAGACATGTTGG
CAACCACAAACGTGAAGAGAGGGGAGCTCAGCCGAGGCGCCAGCGGACAA
GCACATCTCCGGGGGCCGTCGATTAAGGGGCGATACAGCTGAAAGTGCAC
AGCACAGCGTATACACGTCCATGGTGCGACAGGTCGTACGGAGGCAAAAA
TAGAAAATGTCGACAGTGATAAGAAAGCAAATTATTGAACTCGACAATGA
T back to topCoding sequence (CDS) from alignment at CM002455.1:1142713..1145663- >rna458 ID=rna458|Name=rna458|organism=Nannochloropsis gaditana|type=CDS|length=2478bp|location=Sequence derived from alignment at CM002455.1:1142713..1145663- (Nannochloropsis gaditana)
ATGGATGTAGACGTCGCTGCTTTGCTGCAGGAGGATGACGAGGACACGAG
CGACCCCCCCCCTGCCCCTGTCAATCCCACGTCGCCCCCCCCCCCCCTTC
TACTTGCTCCTCGGCCGGGCGGAGGTCCGCGTCCTGGGCTTTCTCCTGGG
TACTATAGCAGTAATGCGCGGTCCGCTCCTTCAAGCTTTCCCACAGGGTA
TAATCCATCCCAAATGCAGCAGTTCCCTCAAGCTGGGCAAGCTCAGGGCC
AAGCACAGCGGCAACAGCAGCAACAGCATCCAAATTTTCAACCACAGCCA
CCACCGAACATGACAACACCATCACAACAGCGACAGGCCCTGCAGCAATC
CTATCACATCCCAGCGCAAGGCTTCCCTTCCCAATCCCAGCCGCAGCAGC
AGCATCAACAGTCTCTGCGCCATCAGCAGCAGCAGCAACAACAACATCAG
CAACGTCAACAACAACAACAACATCATCATCAACAACAACAACCACCACA
ACTACAACAACCACCACCACCACAACAACAACAACATCAACAATATCATC
AACAAAACCAACAACAACAACAACAACCACAACCACAGCAACAGCAACAA
GAGTACCAGCAGCAGAAGCAGCGACAGCACTTCCAGCAGCAGCAGCAGCA
GCAACAACAACAATACCAACATCAACAACGTCAACAACAACAACCCCAAC
TGCAACAACCACAACAACAATATCATCACCAACACCAACAACAACAGCAA
CAACAACCATCACCACAACAACAACCACGAAAACAACAACAACAACAACA
ACAACAACAACCACAACAACAACAACAACAACAACAACAACAACAACAAC
TATTGCAGCAACGGCAGTTATCGCAGCAGCCGCAACATTCACAACAGCCA
ACGCAACAGTCGCAACCACAACAGCATTTGCAGCAGCGTCCACTCCACCA
TCAACAGCAGCATCAGCTTCAGCAGCAACACCAGCCAGCGACACCTCAGG
TGCAGCTCCAGCAACCACCAGGCGCCCCGGCAGTCGGCTCACAGCAGTCC
CTTCGAAGGCCAGCGCCATCCCAAATCGTTCAGTCGTCTCACCAGCAGCA
AAGCTATCCACAGCAACAGCAATCACCGTCGCATCAACATCTCCAACGCC
CTTCACAATACCAAGACCCCGCCACGGCCAACACTACGAACACGCACCAG
AGCGGCAACAGTAGTGCTAACACGGCCGGCACGGGTAGCGGAGGGCCTCG
AAAGGCGAGTTTTGCAGAATGTCTCTATCGGACCATGTTGAAAATGGACA
CCGAGAAAAAGGTCTCGATTCAGGAGGCTTTCCGGTATTTCAAGGCACAC
CCTAAACTGCCTCACGTGGAGGTTCAACAAAAGTTAGTCGAATTGTTAGG
CAAAGATTTTGTGTCGCGCGCGTGGAGGGAAGCGCGGCGCTTATTGGAGC
AAGCGGGGGGACAGCGGGGGGATGGGGAAAGGTTTTCGCCGGACAAGCCC
CCGTCTTCCCGACAGCAACATCAGCTACCACACCAAGAGCAGGGAGCAGC
CCGGGCCCCTCTACAGCAGCCACAGGGGGGTCAGGTGGTGGAGGCCTTGG
ATGATTTGGATCTGATCAACGCCCAGCAAGCAACGGGGGAGGATATTGAA
TCCGATATCACCAGGGAGGCGGACTTGGAGTGTATCGTGCGGGAGGAGGA
CGAAGGTCTCCTGGAGCACATCCAGCCTCTGCGTATGCTGAGTGCAAAGG
AGGCAGAGACCTGGGAATTCAAACATGTTATGGACGGAGAATTGGTTCGT
AAAGCTTTGAGGAGGGCGGAACGTAGGGAGGAAGAGAGGCTGAGTGCGCG
TACAGTAAGATGTGCAAATGGAGGGGAGAAAGGCAAACTCGGGATGGGCG
CAGAGGATCAAGGGAGAAAGAAATTGGTGGGGGAGGGGAAGGGCAAGGTG
GAAGAAAAAGAAAGGCAAGAAGAGCCCGAGGAGGACGAGTCCTTGGGCAG
GGCGCGTGCGGTGGAGGCTTTATCCCGAGCGTGCCAGGACTATGCGACGG
GATTATTGGAAGACTTGGTGCGGCTGGCGAAGCAGCGGGAAAACGAGGAC
GTGCGACATTTGGTCCGTGAGGGGGCGACATTGGGTGCGCAAGAACCCAT
GGTTGTCAGGTTTCTGGCTCCCTACGAGCTACCGGGAAGGAAGAATGCCG
ATGAGAACGAAGCGGAAGAGGAGCAGGAGCAGCAGGGGAAGGGCCAACAT
AGAAATGGAGAGGCGACAGAGAGTTTGCGGCCCGAGGAGGGTCATATCCT
AAGGCGTACGGACGTGGTTCGATATTTGGGAAGAAAGCAGAGGAGGGGCA
GGCGGCAGGGGCATGATCGGTTGATAGACATGTTGGCAACCACAAACGTG
AAGAGAGGGGAGCTCAGCCGAGGCGCCAGCGGACAAGCACATCTCCGGGG
GCCGTCGATTAAGGGGCGATACAGCTGA back to top
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