|
|
Properties
| Property Name | Value |
|---|
| Product | phosphoinositol transporter |
| Orig transcript id | gnl|cribi|Naga_100003g22.1736.mrna |
| Orig protein id | gnl|cribi|Naga_100003g22.1736 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1139655..1142707 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna457 ID=rna457|Name=rna457|organism=Nannochloropsis gaditana|type=mRNA|length=972bp
ATGTTTTTGACTTCAACAAAGCCGCTAGATGTTCTAGGGAAAGTGATAGT
GAGTTTCTTATTGGTTTCTGCTGTCTTCTATGGCTTTTTCCTCTTGGACA
TCGTCGGCCTCAAAAACAAAAGGCTTCGCGCCTCTTGGGCGCTAAAAGCT
CTTTCAGTTGTGCATGCGACTGTAGTCGCGACGATGAGCATCTGGGCTTT
GTTCTACGAAAAAAACATGCATGAAATAACTACTGGCATCCTCCAACGCG
ACGCGGCATCGGTGCGATGGCCTCTCGTTCATGCCCGTTCCGACGTGGTC
GCCGTTGCAGCTCCTCTCACATTGGCATATTTCCTCTTTGATTTGGCGCT
TATTCCCGTGTGGGAAGGTCGATTCGCGCAACAGATACTCATCTTTTTAC
ACCACGGTATCTCCATCGTCACGTGGCCGTTCGGGATCTGCCATCCCGCC
TGCCATTACTTCCTTCTTTGCTGTCTGAGCATGGAGTTTTCCACCCCCTT
CGTCCAGTACCGATGGTTTATACTGCAGAGTGAAGATCTGGGGAAAAACC
ATCCCCTGTACATCTTTAATGGTATCATTATGACCATTGCCTTCGCCCTT
TGCCGGCTATGTCCCATGCTGCCACTCAACATTTGGGCCATCCTCGTTTC
GGCTCCTCATTCCGCTGAGTCGGGCCTGCCCTGGACGGTGCGAGCAGCGA
GCAGCGTCCTGGTGTTGCCCAACCTGCTGAACGCCTACTGGGGATACATC
ATGATCAAAGGGTTGACGAAAGTGCTTTTTTCTCTGGGAAAGCCATGCAA
AGAAGCGAGCAAGGCTGGTCGTCCGGACAACGTCCTTAAAATGGAGAAAA
GTACTGAAGCCTCGTCTCCTTGGCTCCCGTCGCCCGCAGCCAAGAGGCCG
TCACAAGCACGGGCAACGGCACTAGCGACGCCCTCAACTCAAGGCTGTGA
GCAGGGCCTGAAGGCGGCCTGA back to topprotein sequence of rna457 >rna457-protein ID=rna457-protein|Name=rna457|organism=Nannochloropsis gaditana|type=polypeptide|length=609bp
MPDSGSPLEARGTAATATPVLIKPDVCSDEVVSAAGSTTYPVGGSSTQSI
PTSSSPTKQLRGPPFGVLKTGNLLKRNPNRPFDKPKRRFLILTSIALHWF
KREDGYDLFGDERGNINLYDMSKVDLCAILPDNPSSRGDAFEVCCHQDSV
HRIFQASSPEEARAWVSALKGAMKARPTCRRETLSGLSFSPHGHNYDKEP
PLVSVVTVKKGEAGEEVVLAKAPQYQYGKNFRLPLDPMASSPPPFSQTLC
ILLSNGDSAEVNTEVLRNCEVGDTLPARVSCLSDQVAMLPLTLRASFEAK
TGAAPATPISRPEVFLVSSLSAVFLALSMGWNLQDGQGMAKGPGCFHYVE
RLLFLVLVAFTLLRALCPQLQVYLQNHNSWNSNHGYTMVLEISVDDYVVD
SRRGKNAEEEEANVLPPIPDRFINGCFGDMAEAERRWRITLAWRKTFGTD
TILEREHPYFDLVKQALPAFYCGTATDGNPVYYERSGQTDLAKAKEVGLD
WMVYSYVHSTEFVFKVLHPRETARTVTIFDVEGLSLGDIAGDPLEFIRRA
THVMQEHYPERCRVIIICNCTGWFSFVWKIIRPLVNETTQQKVKVTHSIL
SVHHSRNRG back to topmRNA from alignment at CM002455.1:1139655..1142707+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna457 ID=rna457|Name=rna457|organism=Nannochloropsis gaditana|type=mRNA|length=3053bp|location=Sequence derived from alignment at CM002455.1:1139655..1142707+ (Nannochloropsis gaditana)
GTCTGCAACAGGAATACTTTTGGCATAGAACAAGCATGCCGGATTCCGGC
TCGCCTCTGGAAGCACGGGGAACAGCAGCCACTGCAACGCCGGTGCTCAT
AAAACCGGATGTTTGCTCGGATGAGGTTGTCTCTGCGGCAGGCTCTACGA
CCTATCCTGTCGGAGGATCGAGCACCCAAAGTATAccaacgtcttcctcc
cccacaaaGCAGCTGAGAGGCCCTCCGTTCGGGGTCTTAAAGACTGGAAA
TCTGCTCAAGAGGAATCCCAACAGACCATTTGATAAGCCCAAAAGACGAT
TTCTCATCTTGACGAGCATAGCTCTTCATTGGTTTAAGCGCGAGGATGGT
TACGATCTGTTCGGAGACGAGCGTGGAAACATTAATCTTTATGACATGTC
AAAGGTGGACCTTTGTGCGATCTTACCCGACAACCCATCATCGCGTGGAG
ATGCTTTCGAGGTCTGCTGCCATCAAGATTCAGTTCATCGCATCTTCCAA
GCGTCATCGCCGGAGGAGGCACGCGCGTGGGTGTCAGCCTTGAAGGGCGC
TATGAAAGCGCGCCCCACGTGTCGGCGCGAGACCCTATCTGGGTTGAGTT
TCTCGCCCCATGGTCACAACTACGACAAAGAACCGCCTTTAGTCTCGGTC
GTTACGGTCAAAAAGGGTGAGGCTGGAGAGGAAGTGGTCTTAGCCAAAGC
GCCGCAGTATCAGTACGGGAAAAACTTCCGGCTGCCCCTTGATCCGATgg
cttcctctccgcctcccttctcccagACACTGTGCATCTTGTTAAGCAAT
GGAGATTCGGCAGAGGTAAACACAGAGGTACTGAGGAATTGCGAGGTGGG
CGATACCTTACCCGCGCGAGTTAGCTGTCTGAGCGACCAGGTTGCTATGC
TACCTCTCACGCTTAGAGCTAGTTTTGAGGCAAAGACCGGAGCAGCCCCC
GCGACACCGATTTCTCGGCCAGAAGTATTTCTTGTTTCCTCATTATCTGC
CGTCTTTCTGGCTTTGTCCATGGGATGGAACCTTCAGGATGGACAAGGGA
TGGCAAAAGGTCCGGGATGCTTCCATTACGTGGAACGCCTGCTTTTCCTG
GTCCTGGTGGCTTTCACCCTGCTTCGTGCTCTGTGTCCACAGCTGCAGGT
ATATCTGCAGAACCACAATTCTTGGAACAGTAATCACGGGTACACAATGG
TATTAGAAATTTCCGTCGACGACTACGTGGTCGACAGCCGCCGCGGCAAG
AAcgctgaggaagaagaagccaacgttctccctcccatccctgaCCGTTT
CATCAATGGCTGCTTTGGGGACATGGCCGAGGCTGAGCGTCGATGGAGAA
TCACCTTGGCCTGGCGCAAGACTTTTGGGACAGATACAATCTTGGAACGC
GAGCATCCGTACTTTGATTTGGTAAAGCAGGCACTACCGGCCTTTTATTG
CGGAACCGCCACGGACGGGAACCCTGTGTACTACGAGAGATCGGGGCAGA
CCGAcctggccaaggccaaggaggtggggcTAGACTGGATGGTGTACAGC
TATGTGCACTCCACAGAGGTAGGTCTTTCCGGCTCGCATGAGCAGGAGAC
AAGTCCGATCGGACGGGCTCCAGGTGCCTTTTCAATCACGCACCTGTTTC
TATTAAACAATCTATCTTATCGGATTTCGCTGAAACTTGGGTGTACAAGT
GGCGGAGaactcacgccctccctcttttttcggTATTTAGTTCGTGTTCA
AGGTGTTGCATCCGCGCGAGACTGCTCGCACGGTCACAATCTTCGACGTG
GAGGGTCTGTCGCTGGGGGACATCGCTGGAGATCCGCTGGAATTTATTCG
AAGAGCCACACATGTCATGCAGGTAATGTACAGATTGCGCAGCGATAGCG
CGTCACATACAGCGGTTTAAACCCGTAGGAAAAGTTGTAATCGCCTTGCG
ATCAACCGAAAGCCAAAATGATGCGTTCACCTTTCATGACCTCAACCCAC
TGGTTGCTGATACCTCTAGGAGCACTACCCAGAGCGGTGCCGCGTCATCA
TAATCTGCAATTGCACGGGTTGGTTCTCCTTCGTTTGGAAAATTATACGA
CCTCTCGTTAACGAGACAACGCAGCAGAAAGTCAAGGTAACCCATTCTAT
CCTTTCGGTGCATCACAGCAGGAATAGGGGATGAgatcttcctctcttct
tctcctatATTCTAAAATGTGTGTGCTGTTACATGTGCTGTTTGTGTCTT
TTAAAAAAAGTCCATTGCCGCTTTTTGGTTTTGCATCTTGTTTAATAGAT
CGTCAGCAAATCCGGGACTTTCAAGGCGATAAACGAATTTGTGGAAGCGG
ATCAGATTCCAGTCGAGTACGGAGGAAGTCTTCGATTTGGTGACGGGGAA
GACAGCTGCCGATGGCTATGTCCGGAAGAACAACAGTTACGTGAGCATGT
TCAGGCGATCAATGAAGGATTtaaagaggaaagagccgCGAGAGGGGAGC
CAGAGCCGGATCGCATGGAGCCGATCTATGGGGATTGAGTACAAGGGGGG
GCGCGGAtcggggaaaaggcagggaggggtgacATAAAGGCACGACACAA
GTTTGCAGGAACAGGCCTTCACAACGCGGGAAAAGTGGATCCAGAGGAAA
AATTCATGGACGAGATCATAAGGGAGGTGCATGCGGGCAGTCAGGAGACG
ACACAaaggaaagacaagaggaggaaaggggcttCTGAAAAACACTTTGA
AAAGAGATGGCAATGTCATTTTGTGTATGGGCCAAATCCATTTGACAGTC
AAGAGTGAAAATTGCATAAAGAGATGCACGCTGAGATTTGAGTACTAATT
GCTAGGATGCTTGGTGCATGCGCGATAGGATTGTCTCCCACAAGTCTCGC
CTTTGTGACAGCATGACATTCATTTCTTATTAAGAAAGCCAAAGGTCACG
TCGAGATTGAATATGTCTCCGCGTAGAAATAAACACATCGCAAGGAGGCA
TTTAAAGTCCCTGCCAAAAGTGAAATTAAACTAAATGCACCTTTCTCAAC
AAC back to topCoding sequence (CDS) from alignment at CM002455.1:1139655..1142707+ >rna457 ID=rna457|Name=rna457|organism=Nannochloropsis gaditana|type=CDS|length=5490bp|location=Sequence derived from alignment at CM002455.1:1139655..1142707+ (Nannochloropsis gaditana)
ATGCCGGATTCCGGCTCGCCTCTGGAAGCACGGGGAACAGCAGCCACTGC
AACGCCGGTGCTCATAAAACCGGATGTTTGCTCGGATGAGGTTGTCTCTG
CGGCAGGCTCTACGACCTATCCTGTCGGAGGATCGAGCACCCAAAGTATA
ccaacgtcttcctcccccacaaaGCAGCTGAGAGGCCCTCCGTTCGGGGT
CTTAAAGACTGGAAATCTGCTCAAGAGGAATCCCAACAGACCATTTGATA
AGCCCAAAAGACGATTTCTCATCTTGACGAGCATAGCTCTTCATTGGTTT
AAGCGCGAGGATGGTTACGATCTGTTCGGAGACGAGCGTGGAAACATTAA
TCTTTATGACATGTCAAAGGTGGACCTTTGTGCGATCTTACCCGACAACC
CATCATCGCGTGGAGATGCTTTCGAGGTCTGCTGCCATCAAGATTCAGTT
CATCGCATCTTCCAAGCGTCATCGCCGGAGGAGGCACGCGCGTGGGTGTC
AGCCTTGAAGGGCGCTATGAAAGCGCGCCCCACGTGTCGGCGCGAGACCC
TATCTGGGTTGAGTTTCTCGCCCCATGGTCACAACTACGACAAAGAACCG
CCTTTAGTCTCGGTCGTTACGGTCAAAAAGGGTGAGGCTGGAGAGGAAGT
GGTCTTAGCCAAAGCGCCGCAGTATCAGTACGGGAAAAACTTCCGGCTGC
CCCTTGATCCGATggcttcctctccgcctcccttctcccagACACTGTGC
ATCTTGTTAAGCAATGGAGATTCGGCAGAGGTAAACACAGAGGTACTGAG
GAATTGCGAGGTGGGCGATACCTTACCCGCGCGAGTTAGCTGTCTGAGCG
ACCAGGTTGCTATGCTACCTCTCACGCTTAGAGCTAGTTTTGAGGCAAAG
ACCGGAGCAGCCCCCGCGACACCGATTTCTCGGCCAGAAGTATTTCTTGT
TTCCTCATTATCTGCCGTCTTTCTGGCTTTGTCCATGGGATGGAACCTTC
AGGATGGACAAGGGATGGCAAAAGGTCCGGGATGCTTCCATTACGTGGAA
CGCCTGCTTTTCCTGGTCCTGGTGGCTTTCACCCTGCTTCGTGCTCTGTG
TCCACAGCTGCAGGTATATCTGCAGAACCACAATTCTTGGAACAGTAATC
ACGGGTACACAATGGTATTAGAAATTTCCGTCGACGACTACGTGGTCGAC
AGCCGCCGCGGCAAGAAcgctgaggaagaagaagccaacgttctccctcc
catccctgaCCGTTTCATCAATGGCTGCTTTGGGGACATGGCCGAGGCTG
AGCGTCGATGGAGAATCACCTTGGCCTGGCGCAAGACTTTTGGGACAGAT
ACAATCTTGGAACGCGAGCATCCGTACTTTGATTTGGTAAAGCAGGCACT
ACCGGCCTTTTATTGCGGAACCGCCACGGACGGGAACCCTGTGTACTACG
AGAGATCGGGGCAGACCGAcctggccaaggccaaggaggtggggcTAGAC
TGGATGGTGTACAGCTATGTGCACTCCACAGAGTTCGTGTTCAAGGTGTT
GCATCCGCGCGAGACTGCTCGCACGGTCACAATCTTCGACGTGGAGGGTC
TGTCGCTGGGGGACATCGCTGGAGATCCGCTGGAATTTATTCGAAGAGCC
ACACATGTCATGCAGGAGCACTACCCAGAGCGGTGCCGCGTCATCATAAT
CTGCAATTGCACGGGTTGGTTCTCCTTCGTTTGGAAAATTATACGACCTC
TCGTTAACGAGACAACGCAGCAGAAAGTCAAGGTAACCCATTCTATCCTT
TCGGTGCATCACAGCAGGAATAGGGGATGAATGCCGGATTCCGGCTCGCC
TCTGGAAGCACGGGGAACAGCAGCCACTGCAACGCCGGTGCTCATAAAAC
CGGATGTTTGCTCGGATGAGGTTGTCTCTGCGGCAGGCTCTACGACCTAT
CCTGTCGGAGGATCGAGCACCCAAAGTATAccaacgtcttcctcccccac
aaaGCAGCTGAGAGGCCCTCCGTTCGGGGTCTTAAAGACTGGAAATCTGC
TCAAGAGGAATCCCAACAGACCATTTGATAAGCCCAAAAGACGATTTCTC
ATCTTGACGAGCATAGCTCTTCATTGGTTTAAGCGCGAGGATGGTTACGA
TCTGTTCGGAGACGAGCGTGGAAACATTAATCTTTATGACATGTCAAAGG
TGGACCTTTGTGCGATCTTACCCGACAACCCATCATCGCGTGGAGATGCT
TTCGAGGTCTGCTGCCATCAAGATTCAGTTCATCGCATCTTCCAAGCGTC
ATCGCCGGAGGAGGCACGCGCGTGGGTGTCAGCCTTGAAGGGCGCTATGA
AAGCGCGCCCCACGTGTCGGCGCGAGACCCTATCTGGGTTGAGTTTCTCG
CCCCATGGTCACAACTACGACAAAGAACCGCCTTTAGTCTCGGTCGTTAC
GGTCAAAAAGGGTGAGGCTGGAGAGGAAGTGGTCTTAGCCAAAGCGCCGC
AGTATCAGTACGGGAAAAACTTCCGGCTGCCCCTTGATCCGATggcttcc
tctccgcctcccttctcccagACACTGTGCATCTTGTTAAGCAATGGAGA
TTCGGCAGAGGTAAACACAGAGGTACTGAGGAATTGCGAGGTGGGCGATA
CCTTACCCGCGCGAGTTAGCTGTCTGAGCGACCAGGTTGCTATGCTACCT
CTCACGCTTAGAGCTAGTTTTGAGGCAAAGACCGGAGCAGCCCCCGCGAC
ACCGATTTCTCGGCCAGAAGTATTTCTTGTTTCCTCATTATCTGCCGTCT
TTCTGGCTTTGTCCATGGGATGGAACCTTCAGGATGGACAAGGGATGGCA
AAAGGTCCGGGATGCTTCCATTACGTGGAACGCCTGCTTTTCCTGGTCCT
GGTGGCTTTCACCCTGCTTCGTGCTCTGTGTCCACAGCTGCAGGTATATC
TGCAGAACCACAATTCTTGGAACAGTAATCACGGGTACACAATGGTATTA
GAAATTTCCGTCGACGACTACGTGGTCGACAGCCGCCGCGGCAAGAAcgc
tgaggaagaagaagccaacgttctccctcccatccctgaCCGTTTCATCA
ATGGCTGCTTTGGGGACATGGCCGAGGCTGAGCGTCGATGGAGAATCACC
TTGGCCTGGCGCAAGACTTTTGGGACAGATACAATCTTGGAACGCGAGCA
TCCGTACTTTGATTTGGTAAAGCAGGCACTACCGGCCTTTTATTGCGGAA
CCGCCACGGACGGGAACCCTGTGTACTACGAGAGATCGGGGCAGACCGAc
ctggccaaggccaaggaggtggggcTAGACTGGATGGTGTACAGCTATGT
GCACTCCACAGAGTTCGTGTTCAAGGTGTTGCATCCGCGCGAGACTGCTC
GCACGGTCACAATCTTCGACGTGGAGGGTCTGTCGCTGGGGGACATCGCT
GGAGATCCGCTGGAATTTATTCGAAGAGCCACACATGTCATGCAGGAGCA
CTACCCAGAGCGGTGCCGCGTCATCATAATCTGCAATTGCACGGGTTGGT
TCTCCTTCGTTTGGAAAATTATACGACCTCTCGTTAACGAGACAACGCAG
CAGAAAGTCAAGGTAACCCATTCTATCCTTTCGGTGCATCACAGCAGGAA
TAGGGGATGAATGCCGGATTCCGGCTCGCCTCTGGAAGCACGGGGAACAG
CAGCCACTGCAACGCCGGTGCTCATAAAACCGGATGTTTGCTCGGATGAG
GTTGTCTCTGCGGCAGGCTCTACGACCTATCCTGTCGGAGGATCGAGCAC
CCAAAGTATAccaacgtcttcctcccccacaaaGCAGCTGAGAGGCCCTC
CGTTCGGGGTCTTAAAGACTGGAAATCTGCTCAAGAGGAATCCCAACAGA
CCATTTGATAAGCCCAAAAGACGATTTCTCATCTTGACGAGCATAGCTCT
TCATTGGTTTAAGCGCGAGGATGGTTACGATCTGTTCGGAGACGAGCGTG
GAAACATTAATCTTTATGACATGTCAAAGGTGGACCTTTGTGCGATCTTA
CCCGACAACCCATCATCGCGTGGAGATGCTTTCGAGGTCTGCTGCCATCA
AGATTCAGTTCATCGCATCTTCCAAGCGTCATCGCCGGAGGAGGCACGCG
CGTGGGTGTCAGCCTTGAAGGGCGCTATGAAAGCGCGCCCCACGTGTCGG
CGCGAGACCCTATCTGGGTTGAGTTTCTCGCCCCATGGTCACAACTACGA
CAAAGAACCGCCTTTAGTCTCGGTCGTTACGGTCAAAAAGGGTGAGGCTG
GAGAGGAAGTGGTCTTAGCCAAAGCGCCGCAGTATCAGTACGGGAAAAAC
TTCCGGCTGCCCCTTGATCCGATggcttcctctccgcctcccttctccca
gACACTGTGCATCTTGTTAAGCAATGGAGATTCGGCAGAGGTAAACACAG
AGGTACTGAGGAATTGCGAGGTGGGCGATACCTTACCCGCGCGAGTTAGC
TGTCTGAGCGACCAGGTTGCTATGCTACCTCTCACGCTTAGAGCTAGTTT
TGAGGCAAAGACCGGAGCAGCCCCCGCGACACCGATTTCTCGGCCAGAAG
TATTTCTTGTTTCCTCATTATCTGCCGTCTTTCTGGCTTTGTCCATGGGA
TGGAACCTTCAGGATGGACAAGGGATGGCAAAAGGTCCGGGATGCTTCCA
TTACGTGGAACGCCTGCTTTTCCTGGTCCTGGTGGCTTTCACCCTGCTTC
GTGCTCTGTGTCCACAGCTGCAGGTATATCTGCAGAACCACAATTCTTGG
AACAGTAATCACGGGTACACAATGGTATTAGAAATTTCCGTCGACGACTA
CGTGGTCGACAGCCGCCGCGGCAAGAAcgctgaggaagaagaagccaacg
ttctccctcccatccctgaCCGTTTCATCAATGGCTGCTTTGGGGACATG
GCCGAGGCTGAGCGTCGATGGAGAATCACCTTGGCCTGGCGCAAGACTTT
TGGGACAGATACAATCTTGGAACGCGAGCATCCGTACTTTGATTTGGTAA
AGCAGGCACTACCGGCCTTTTATTGCGGAACCGCCACGGACGGGAACCCT
GTGTACTACGAGAGATCGGGGCAGACCGAcctggccaaggccaaggaggt
ggggcTAGACTGGATGGTGTACAGCTATGTGCACTCCACAGAGTTCGTGT
TCAAGGTGTTGCATCCGCGCGAGACTGCTCGCACGGTCACAATCTTCGAC
GTGGAGGGTCTGTCGCTGGGGGACATCGCTGGAGATCCGCTGGAATTTAT
TCGAAGAGCCACACATGTCATGCAGGAGCACTACCCAGAGCGGTGCCGCG
TCATCATAATCTGCAATTGCACGGGTTGGTTCTCCTTCGTTTGGAAAATT
ATACGACCTCTCGTTAACGAGACAACGCAGCAGAAAGTCAAGGTAACCCA
TTCTATCCTTTCGGTGCATCACAGCAGGAATAGGGGATGA back to top
|