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Properties
| Property Name | Value |
|---|
| Product | sumo ligase |
| Orig transcript id | gnl|cribi|Naga_100014g29.9322.mrna |
| Orig protein id | gnl|cribi|Naga_100014g29.9322 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:895170..897955 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4551 ID=rna4551|Name=rna4551|organism=Nannochloropsis gaditana|type=mRNA|length=2226bp
TTTGTCCTGGCAATGTCAGCGTACTTTGTGAAGACAAAGCACGTTACGAT
GGTATATGTGGTACTCTCTATGGTAAATTTTCTGTGTCAGGCCTGTCCAT
CAAAAAGTTGTGGGCAACCTTTCACTGGATCGACCTCTCCCCTCCGAGTC
ACTGCCCATGGCCACTCAAGCGACCCCTCACGTCTTCTCATGCCCGTGAC
TTGCGCATTCACAGGGCTGTACGTCATGGGTAAACATAAAAAGCTGCTGC
AGCAGCAGCGACAGCACCAGAAAAAAGTAGCCAAAGTAACCAAAACGCTG
ACGCAACCCAAGGTCAAGGCCTCAAACAAAGCGCAGCGCAAGGAGCTTGA
GGCCCGGATGGCCCGATGGACAAAAGAGCAGAAAGAAGAGGCCGCAAACA
GACGGACTGAGGAAGAGTTGAATGAAGAGGAGTCTGACGGGGAGGAGATG
CAAGAAAATGGTGTAATCGAAAGAAATCCGTCCGCCAGTGAGGAGGGGGA
GGAGGAAGCAGAGGGGGAAGTGGACGGGGAGGCTGAAGATAATGGTTATG
ACGAGCAGCGCTCCCGTGTAAATACCAAACGCAAGCATCTACCCTCATCC
TCCGAGGCCAAGAAGGCGAGGAAGGGCGTGGACGAAAAAAGTGGAACGGC
ATTGCCCGAAACGCCGCGTCCGGAAGCGGGCTCTGGGGAAGGGAAGGGCA
GTGGGGGCGGGGCGGGAAAAAGCGGGGCCGTGTTCTTTGCCAACCAGCCC
TTTGAGGACCTGCCAATATCGGACGCGACCAAATGCGCCCTCAAGAGGCT
CCGGTTCGTGAACATGACGCACATCCAGTCCCTGGCGATCCCCCCCCTCT
TGGCTGGCAAGGATGTGGTGGCCGCGGCGAAGACCGGGTCGGGTAAGACG
CTCGCCTTCCTCGTCCCGGTCGTCGAGCTCCTTTCCAAGGTGAAATGGGC
GGCTCGGAACGGGACGGGTGCGATCATCATCTCCCCGACGCGCGAGCTCT
CCATGCAGATCTACGGCGTGCTCCGCGACCTGTGCGATGAGGGGGGGCAT
CCCCTCACCCACGGGCTCATCATGGGCGGCGCCAACCGACGCGCCGAGGC
GGAGCGGCTGGTGAAGGGAGTGAGTATCCTGGTGGCAACGCCGGGCCGGC
TCCTGGACCACCTGCAGAACACGAAGGGGTTCTTGACCCGGAACCTGCAG
CTCTTGGTCATCGACGAAGCGGACCGCATCCTCGAGCAGGGCTTCGAGGA
GGACATGCACCAAATCATCAAGAGCCTACCCAAGCACAGGCAGACGATGC
TTTTTAGCGCCACGCAGACCAAGAAAGTAGAGGACTTGACGCGGCTCTCC
ATGCAAGGTCGGCCCGTCTTTGTGGGCGCGCACGAGGAGGCAGCCGTCGC
CACCGTGGGGGGCCTGGAGCAGGGCTACGTGGTTTGTCCCTCCGACAAGC
GCTTCCTCCTTCTCTTCACCTTTTTGAAGCGGAACAAGCAGAGGAAGATC
ATGGTCTTCTTCTCATCCTGCAACTCGGTCAAGTTCCATGCGGAGCTGCT
CAACTACATCGACCTCCCCGTCATGGACATCCACGGCCGGCAGAAACAAC
AGCGTCGAACAACCACGTTTTTCCAGTTCTGCCGACAGGACAAAGGTATC
TTGCTCTGTACGGACGTTGCGGCCCGAGGCTTGGACATACCGGCCGTGGA
CTGGATCATCCAGTATGACCCTCCAGACGACCCGCGTGAGTACATCCACC
GTGTGGGCAGGACGGCGCGCGGGGCCGCGGGGAAAGGCCGTGCTTTGCTG
TTCTTGACAGCAGAGGAAGTGGGCTTTCTGAAGTACTTGCGCGCGGCCAA
GGTTGCCCTGAACGAGTACGAGTTTCCGGAAAAGAAGGTGGCGAACGTCC
AAGCCCAGTTGACCAAGCTGGTCGAGAAGAACTATTACCTGAACAAGTCC
GCCCGGGATGCCTATCGATCATACCTCCTAGCCTACGCGTCGCATTCGCA
CAAGGATATATTTAACGTACACGAGCTCGATTTGCAAGCTGTGGCCCGCG
CTTTCGGGTTCTCGGTGCCCCCCCGCGTCGACATAAATCTAAGCAGCAAA
GGTCCAAAAGGCCGATTGAAAAACACACATAAGGACAAGCGATTTGGGAG
TACCGGGCACAAGTTTTCCGCCAACAATCCTTACGGAAGGCGCGAAGCGG
GGGACTCGCGACAGTTCACGCGATGA back to topprotein sequence of rna4551 >rna4551-protein ID=rna4551-protein|Name=rna4551|organism=Nannochloropsis gaditana|type=polypeptide|length=734bp
MESNKLCSPEDLENFKLFLSAELSRLRIPEIKHMVMRLHLPRSGNKSELV
SRLVAQFEAFNHPKTLFQRDQLIELIRQQLIAYQGFSRLPELFSSTGGED
AAAAGSNGVSGAVPPFAPVGGEGNLGGRAPVPFTFRLNVGAGNGGNPSGW
PGSAPASASGSLAALGRQQGGPGGPHSAPAGKLAGTFVQCVCGQAVTPWD
EVKCAECHIAFHDQCYGTSMRARNKTFSAACFLCLSRRQNPFLEVVETLV
PPSRVTSRARMETNFQFKLSHQQQRDMLASRQGGSRNEGSLQLLVRCFPL
NLLETARPSPGHDEGKLPFYPTHCWPLESQLRVNTECVPIKQRQTYFYGS
QRKSKGHSEPVDVFLLARTGINRVGLMHNDEGKGFVIMVQIVKVVGVQRL
LRKVVESPDTPTAEESLERIRQSFRGCSVDSDTEDGELMATVTRLSLRCP
LGMTPIRIPARGTDCHHLQCFDLDTFLRYNERGAAAGWRCGVCNTVLTLE
GLRVDAFMRNILAQIEARKEMNEDLDSIEINHQGEWELFNSSAASSRKRK
AEGNVAGEEEGKAVSDGKVVDPEVADDDDVALSDLCKQVARKENGQLPRQ
EQQHVPQGHHTQQEVLQQQKQAQQRGAALRDPVAIDLTLSSDDDGGGVWN
ESEEDDWRSVLDTISRRPLEPPTALPPSSAPEPTTAISASPGALVPSGTS
AECDVANHEAIPPQQVPEGGGCSAMLPLVDGRGK back to topmRNA from alignment at CM002463.1:895170..897955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4551 ID=rna4551|Name=rna4551|organism=Nannochloropsis gaditana|type=mRNA|length=2786bp|location=Sequence derived from alignment at CM002463.1:895170..897955+ (Nannochloropsis gaditana)
ACAGCATTTTGCACGGCTTCATTAAACCGGCGGTCCATGGACGAATCGGC
GCGGGCGTCGCCACGGAGGTCATAGGCCCTTGGTGCCGCCTCTCGAGAGG
GGAGCGCACAAGCCACAATTTTCTCAGCCTCTCCCAATATTGAAATTATC
ATCTGGGCAGTTGTACATTTATATTGAACTCGGGACGGAGAGGCCGCAGG
TTCCGTCGTAAAAAGCAGCGCTTGGCCAAGGCGCTCTACAACGAAGCCTT
CACACACCATGGAGAGTAACAAATTATGCAGCCCGGAGGACCTGGAAAAC
TTCAAACTTTTCCTTTCTGCGGAGTTAAGTCGATTACGGATTCCCGAAAT
CAAGCACATGGTGATGCGCTTGCACTTACCTCGGTCGGGCAATAAGTCTG
AGTTGGTTTCACGCCTCGTAGCTCAGTTTGAGGCCTTCAACCATCCAAAA
ACTCTATTTCAGAGGGATCAGCTCATTGAGCTGATACGCCAGCAGCTGAT
AGCATACCAGGGTTTTTCTCGTCTACCGGAGCTCTTCAGTAgcacgggtg
gggaggacgcggcagCCGCCGGTAGCAATGGGGTTTCCGGTGCCGTGCCC
CCGTTCGCCCctgtgggcggggagggaaatttggggggaagggcgccgGT
CCCGTTCACGTTTCGCCTGAACGTCGGAgcaggaaatggaggaaatcCAA
GTGGATGGCCGGGGAGCGctcctgcctccgcttcGGGCTCCTTGGCCGCG
CTAGGGCGACAGCAAGGGGGGCCTGGCGGGCCTCACTCGGCGCCGGCTGG
GAAGCTTGCTGGAACGTTTGTGCAATGCGTGTGCGGGCAGGCCGTGACCC
CCTGGGATGAAGTGAAGTGCGCAGAGTGCCACATCGCCTTCCACGACCAG
TGCTACGGTACCTCCATGCGCGCGCGCAACAAGACGTTCTCAGCCGCCTG
CTTTCTCTGCCTGTCCCGCAGGCAAAACCCATttctggaggtggtggaga
cctTGGTGCCGCCATCACGCGTGACGAGTCGGGCAAGGATGGAGACAAAT
TTTCAATTCAAATTGagccaccagcagcagcgagaCATGCTGGCCTCCCG
GCAGGGCGGTTCTCGAAATGAAGGGTCTCTGCAGCTGCTCGTGCGCTGTT
TCCCTCTAAATCTCCTGGAGACGGCCAGGCCCTCTCCGGGACACGACGAG
GGCAAGCTCCCCTTCTATCCCACGCACTGCTGGCCCCTGGAATCGCAGTT
ACGCGTGAACACGGAGTGTGTGCCGATCAAGCAGCGACAGACCTACTTCT
ACGGTTCCCAACGCAAGTCGAAAGGTCACTCAGAGCCCGTCGACGTCTTC
TTGCTCGCACGCACGGGTATAAACCGCGTCGGCCTCATGCACAacgacga
ggggaagggcttTGTGATAATGGTGCAGAtcgtgaaggtggtgggcgtCC
AGCGTCTGCTCCGCAAGGTGGTGGAGTCCCCGGATACCccgacggcggag
gaaagcttgGAGCGCATCCGTCAGTCCTTCCGCGGATGCTCTGTTGACTC
GGAcacagaggacggggagctCATGGCAACGGTCacccgcctctctctcc
gttGTCCATTGGGCATGACTCCCATCAGAATTCCCGCCCGCGGGACAGAC
TGCCACCATCTGCAGTGCTTTGACTTGGATACCTTTCTTAGGTACAACGA
ACGGGGGGCAGCGGCTGGGTGGCGTTGTGGGGTATGTAATACGGTCCTTA
CCTTGGAGGGTTTGCGGGTGGATGCCTTCATGCGGAATATCCTTGCTCAG
ATTGAAGCACGGAAGGAGATGAACGAGGATCTGGACTCGATCGAGATCAA
CCATcagggagagtgggagctCTTCAATTCCTCTGCAGCTAGCAgccgga
agaggaaagcggaaggCAATGtcgcaggggaggaagaaggaaaagcagtA
AGTGACGGGAAAGTCGTTGATCCTGAGGTCGCtgatgacgacgatgtgGC
GCTCTCGGATCTTTGCAAGCAGGTGGCTCGGAAAGAGAACGGGCAGCTCC
CGCGtcaagagcagcagcacgtgCCGCAAGGGCATCACACACAGCAAGAA
GTTTtgcagcagcaaaagcaagCACAGCAGCGTGGGGCGGCCCTCAGAGA
TCCTGTTGCAATCGACCTAACCTTGAGTAGCGACGATGACGGTGGGGGGG
TGTGGaacgagagcgaggaggatgactgGAGGTCGGTCTTGGACACTATT
AGTCGGAGACCTCTCGAGCCTcccactgccctccccccttcctctgctcc
cGAACCTACCACTGCCATCAGTGCAAGCCCGGGCGCACTGGTTCCAAGTG
GAACGTCGGCGGAATGCGACGTTGCGAATCATGAGGCCATTCCACCACAG
CAGGTacctgaaggggggggctgtTCGGCCATGCTCCCCTTGGtcgacgg
gaggggaaaatagGAGCATgaagggcagagagagaagtgtggagggagaa
aacgACGACGCGTGCTAAAGGCTGCTGATGTTGCGTGTACAGGAGCGGCA
GGGGGTGGAGTACCCTCGATTCTGACGGCGCGTGACGCCTATTGGTTTCG
GTGCCTTGCAAGTGGCTGGCTGGCTCGGGacgagaaggggaagcgaggtC
CGAAGGGAAGCCAGTCGTGTCAGGTCGTTGCCGCGTAGGGTAGAAAATTG
AGAGTAATCGCAGTGTACAGAGTATCTTATTGGTAACACAATCTTTCAAA
TCGATGGTGCACGGCTCTGAAATTATGAACGTTACT back to topCoding sequence (CDS) from alignment at CM002463.1:895170..897955+ >rna4551 ID=rna4551|Name=rna4551|organism=Nannochloropsis gaditana|type=CDS|length=2205bp|location=Sequence derived from alignment at CM002463.1:895170..897955+ (Nannochloropsis gaditana)
ATGGAGAGTAACAAATTATGCAGCCCGGAGGACCTGGAAAACTTCAAACT
TTTCCTTTCTGCGGAGTTAAGTCGATTACGGATTCCCGAAATCAAGCACA
TGGTGATGCGCTTGCACTTACCTCGGTCGGGCAATAAGTCTGAGTTGGTT
TCACGCCTCGTAGCTCAGTTTGAGGCCTTCAACCATCCAAAAACTCTATT
TCAGAGGGATCAGCTCATTGAGCTGATACGCCAGCAGCTGATAGCATACC
AGGGTTTTTCTCGTCTACCGGAGCTCTTCAGTAgcacgggtggggaggac
gcggcagCCGCCGGTAGCAATGGGGTTTCCGGTGCCGTGCCCCCGTTCGC
CCctgtgggcggggagggaaatttggggggaagggcgccgGTCCCGTTCA
CGTTTCGCCTGAACGTCGGAgcaggaaatggaggaaatcCAAGTGGATGG
CCGGGGAGCGctcctgcctccgcttcGGGCTCCTTGGCCGCGCTAGGGCG
ACAGCAAGGGGGGCCTGGCGGGCCTCACTCGGCGCCGGCTGGGAAGCTTG
CTGGAACGTTTGTGCAATGCGTGTGCGGGCAGGCCGTGACCCCCTGGGAT
GAAGTGAAGTGCGCAGAGTGCCACATCGCCTTCCACGACCAGTGCTACGG
TACCTCCATGCGCGCGCGCAACAAGACGTTCTCAGCCGCCTGCTTTCTCT
GCCTGTCCCGCAGGCAAAACCCATttctggaggtggtggagacctTGGTG
CCGCCATCACGCGTGACGAGTCGGGCAAGGATGGAGACAAATTTTCAATT
CAAATTGagccaccagcagcagcgagaCATGCTGGCCTCCCGGCAGGGCG
GTTCTCGAAATGAAGGGTCTCTGCAGCTGCTCGTGCGCTGTTTCCCTCTA
AATCTCCTGGAGACGGCCAGGCCCTCTCCGGGACACGACGAGGGCAAGCT
CCCCTTCTATCCCACGCACTGCTGGCCCCTGGAATCGCAGTTACGCGTGA
ACACGGAGTGTGTGCCGATCAAGCAGCGACAGACCTACTTCTACGGTTCC
CAACGCAAGTCGAAAGGTCACTCAGAGCCCGTCGACGTCTTCTTGCTCGC
ACGCACGGGTATAAACCGCGTCGGCCTCATGCACAacgacgaggggaagg
gcttTGTGATAATGGTGCAGAtcgtgaaggtggtgggcgtCCAGCGTCTG
CTCCGCAAGGTGGTGGAGTCCCCGGATACCccgacggcggaggaaagctt
gGAGCGCATCCGTCAGTCCTTCCGCGGATGCTCTGTTGACTCGGAcacag
aggacggggagctCATGGCAACGGTCacccgcctctctctccgttGTCCA
TTGGGCATGACTCCCATCAGAATTCCCGCCCGCGGGACAGACTGCCACCA
TCTGCAGTGCTTTGACTTGGATACCTTTCTTAGGTACAACGAACGGGGGG
CAGCGGCTGGGTGGCGTTGTGGGGTATGTAATACGGTCCTTACCTTGGAG
GGTTTGCGGGTGGATGCCTTCATGCGGAATATCCTTGCTCAGATTGAAGC
ACGGAAGGAGATGAACGAGGATCTGGACTCGATCGAGATCAACCATcagg
gagagtgggagctCTTCAATTCCTCTGCAGCTAGCAgccggaagaggaaa
gcggaaggCAATGtcgcaggggaggaagaaggaaaagcagtAAGTGACGG
GAAAGTCGTTGATCCTGAGGTCGCtgatgacgacgatgtgGCGCTCTCGG
ATCTTTGCAAGCAGGTGGCTCGGAAAGAGAACGGGCAGCTCCCGCGtcaa
gagcagcagcacgtgCCGCAAGGGCATCACACACAGCAAGAAGTTTtgca
gcagcaaaagcaagCACAGCAGCGTGGGGCGGCCCTCAGAGATCCTGTTG
CAATCGACCTAACCTTGAGTAGCGACGATGACGGTGGGGGGGTGTGGaac
gagagcgaggaggatgactgGAGGTCGGTCTTGGACACTATTAGTCGGAG
ACCTCTCGAGCCTcccactgccctccccccttcctctgctcccGAACCTA
CCACTGCCATCAGTGCAAGCCCGGGCGCACTGGTTCCAAGTGGAACGTCG
GCGGAATGCGACGTTGCGAATCATGAGGCCATTCCACCACAGCAGGTacc
tgaaggggggggctgtTCGGCCATGCTCCCCTTGGtcgacgggaggggaa
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