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Properties
| Property Name | Value |
|---|
| Product | beta- -endoglucanase |
| Orig transcript id | gnl|cribi|Naga_100014g5.9334.mrna |
| Orig protein id | gnl|cribi|Naga_100014g5.9334 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:835932..838475 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4527 ID=rna4527|Name=rna4527|organism=Nannochloropsis gaditana|type=mRNA|length=2173bp
GTGTAACAGCGGTACCAGGGGCAGTAGCATGATGAAGTCCGGACGAGGCC
ATATGACTATTAATTCATGTGGGGTGAAGTCGCATGGAATGACCGACTGA
CGCTCCTCATATAAAAATGTGTTTGACAGATAAAAGCACAATTATCATGG
CGGACGGTACTGGACTCGCTGCCGCGCATGCCGATGCGAGCAAGACAAAG
CCGTCTCCAAGACCTCTGCAAATCATCCGCCTAGGGACAGCAGAGGAAAA
CTATTCCTTCCATTTAGAGCAAGCAAATTTGGACAGCATCATGGCACAAG
TACCATCAGATATGAAGGTTGCCGTCGTCTCCGTGGTGGGGGCTTTTCGT
ACAGGAAAATCTTTTTTGTTGACCTTCTTGCTTCGTTACCTGCGGTATGG
ATCCGTGTTGGACGACAGTGAGGATTGGATGACAGCTGCAGGGGACGTGA
GGGAGGGGAACATAAACGAAAAGGTCTTGGCCGGTGACGACGGTCGAAAC
GCGTTGGAGTCTAGTTTTCAATGGCGCGCGGGGAAGGAACGCACGACAAC
GGGCATTTGGATGTGGTCGGAAGCCTTTGTGCGACGAGTGGCGAACGGGG
AGGAGGTGGCCGTGTTGCTGATGGACACGCAGGGCATGTTCGACAACGAG
ACGTCGATGAATTTGACGGCTTGCATTTTCGGCCTCAGCACCCTGCTTTC
CTCCTACCAGATTTACAATGTCCAGAACCGGATCCAAGAAGACAACCTGC
AGCACCTGGCTTTGTTTTCCGAGTACGGCCGCATCGCCCTCGCAGGGGAG
GCCGGGAAGCTGGTGCGGCAAGGCAATAAACAAGGTGACGAAGGGGCAGA
CAAAGGGCTCGAGGAGAAGAGCGAGGGGGGGATGGAGGCGGAGGAATTGA
TGCTGCCTGACGAGGACGAGATCCCCTTTCAACGTGTGGAATTCCTGGTG
CGCGACTGGATGGACTTCGATGAGGACCTGCCCTTCCACCAACTTAAGGA
GGAGATGGACTCGTACTTGCAGGACGTGATCGAAAAAGGTTCCGTCAAAG
ACCTGCGCCAGACGAGGGAGCAGATTCTGGGCTGCTTCCAGAAGGTTCGT
TGCTTCGTCCTCCCTCACCCAGGCCTGGAGGTTCCCAAGAAGGCTTACAG
CGGGGAGGTGGCCCTGATCAACCCCTTTTTCCGTCGGCTTTTAAACCACT
ACGCCCGCGAGGTTTTCGGGCCCGAGCTCGAGGCCAAGCGCATCCACAAG
CGGGACTTGACGGCCCCGGAGCTCCGGCAGTACGTGTCGAGCTACGTGGA
AATGTTCAAGAGTGGGACGCGGTTTCCCGAGGCTCAGACAATGCTGGAAG
CCACGGCCTCGGCCAACAACCAAAATGCGACCCAGCTGGCCTTGAGTAAG
TACAAAGGGGAAATGGATGCGTATTGCGGGCCCCGAGTGTACGAGTACCG
GAAGGTGGACGACTTTATGGCACATCACCGGGCATGCAAAGATGCGGCCT
TGCAGCTCTTTGACTCGACTGCTACCATTGGTCGCAAAGCTCAGGTGCGG
GAATTTCGTGTGCGAGTCTTGGATGAGATCGAGGATCTGTTCAGTCGTTA
TGAGGAGGCCAACGCAAACAGGAATCCCTTCCGTAATTTCGAGTATTACG
CCCTTCCTTTGCTGGTCGCCTTGGCGGCTTTTGTAATGAGATGGATCGCA
GACCTGGAGTCCACGTGTTCACTGGAGCGGCGATATCTGTGCACCAATGT
ATCCAATGCCATGGGTCATGTATACGTGTTTTTAATCACCTTCATTCTTA
TTTTGTCTTTCAACCGTGTCAAGCTGTTCGTAGATTATGTTCGACAAGTG
GTACCTGTGTTGCTAGGGATGGATAGGATGCATCTGAAGAAGGCGTGAAC
AAAGCATGATTGGAGAGGATGATCGCGGAGAGTGTGCGCCCATGGATGAC
GGGCAGCGAAAATTGTCGCCTTGGAGACAGTTATCGAGAGCAGGCTCTTA
AAGTGATATTGCACTCGAATCGCTCAGTTAAAAAAATCGTGCTCGATGAA
CGAAAGAAAAGACCACGAGGCGAGCTTGACACCGTGGAGTGAATCCTTCG
CGGAAGACGTGTCGAGAAAAGACTACCCGGAGGCTCCTCCTTCATCCCCC
CCCCCTCAAATTCAATCGATGAT back to topprotein sequence of rna4527 >rna4527-protein ID=rna4527-protein|Name=rna4527|organism=Nannochloropsis gaditana|type=polypeptide|length=476bp
MLCVHTRQSLVALLLFAVSYGTRSIEAKSLRSSAKENGIELDYPKAMKLT
TLFYEAQRSGKLPSDNRIPWRGDSALSDGQDHGLDLTGGWYDAGDHVKFN
FPMAWSATTLIWGVLEFGDAWKKTGEMKNILDTVKWPLDYLLKCHPNEDT
YYVQVGDGNADHSYWGAAESLNMNRPSFAITPNNPGTEFAAEGAAALAAG
SILFEDDTAYSALLKAKARSLFELADKNRGSSDISSPFYKSYSGYWDELG
WAAVWLYKATKDAKYLEMAENDYYDNCCAVTNKTEFSWDRKSSAVQLILY
DLTKKEKYADGFAGFMDSWMYETPRTPKGLVFFDKWAPNRYSANTAFLAL
VAAKHGLVPTTYIAFAKSQIDYILKAGGDINPETKQPYYSYQIGFGDNFP
RAPHHRGASCGNGWCGCSGSPQPNILYGAIVGGPGKNDDYSDDCGNYVTN
EVATDYNAGFTSACAGLAQLVLKLKR back to topmRNA from alignment at CM002463.1:835932..838475- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4527 ID=rna4527|Name=rna4527|organism=Nannochloropsis gaditana|type=mRNA|length=2544bp|location=Sequence derived from alignment at CM002463.1:835932..838475- (Nannochloropsis gaditana)
ATCGTTTACATGTACTACGACAATCACGCCTTATCTCGTATTGATATCCC
ACTTTCTAATCGTCGAAGCATGGTGTACTCTCCGTTTTTCTTTTTTCCTC
ATGGTCAGGAGATTTTTTTCCTGTAATCAATGTAATGCGATATGATTCAT
TGTGCATTTTTAAATCTTATTCGAGAACCAATCCACACTCGAACCCTACA
CGTAGTAGATAAAACTCTTCAGCATGTTGTGCGTGCACACTCGCCAAAGC
TTAGTTGCACTCCTTCTTTTCGCTGTCAGCTATGGGACCCGTAGCATTGA
GGCAAAGTCACTAAGGAGCAGCGCTAAGGAAAATGGAATTGAGCTTGATT
ACCCCAAAGCAATGAAGCTCACCACATTATTTTATGAGGCACAGCGGAGC
GGTAAATTGCCCTCGGACAATCGTATTCCTTGGCGTGGCGACAGTGCCCT
AAGTGATGGACAGGATCATGGGCTTGATCTTACAGGCGGCTGGTACGATG
CTGGAGATCACGTGAAATTTAATTTTCCCATGGCATGGAGTGCCACCACG
CTGATTTGGGGAGTGTTAGAATTTGGTGATGCTTGGAAGAAGACTGGAGA
GATGAAAAATATTCTTGATACTGTCAAGTGGCCTTTAGATTACCTGCTGA
AATGTCATCCAAACGAGGATACATACTATGTGCAGGTCGGAGATGGAAAC
GCCGATCATTCGTACTGGGGCGCTGCCGAGTCATTAAATATGAACCGACC
TTCCTTTGCCATTACGCCCAACAATCCCGGTACGGAGTTTGCAGCTGAAG
GGGCCGCGGCTTTAGCGGCTGGCTCGATACTTTTCGAAGATGATACCGCG
TACTCGGCACTGCTCAAGGCCAAGGCTCGATCCCTTTTTGAGCTTGCTGA
TAAAAACCGAGGATCGTCCGACATATCCTCACCCTTTTACAAGAGTTACA
GGTAGGTGTGTGTCAACTTTGCGCTTACTGCGATGCATGCAATTTCTACA
TTTGGGTGCATACAATTGGTTCACACCAAAAACATCCCTCCGCACAGTGG
CTATTGGGATGAGCTCGGATGGGCGGCTGTCTGGCTATACAAGGCGACCA
AGGACGCAAAATATCTCGAAATGGCGGAAAACGACTACTACGACAATTGC
TGTGCTGTCACCAACAAGACTGAGTTCTCGTGGGATCGGAAGTCGTCAGC
CGTGCAGCTTATTTTGTACGACTTGACCAAAAAGGAAAAATACGCGGATG
GATTCGCCGGTTTTATGGACAGTTGGATGTACGAGACGCCCCGAACACCC
AAGGGATTAGTATTTTTCGATAAGTGGGCGCCAAACCGGTACTCGGCCAA
CACGGCCTTCCTGGCCCTTGTTGCGGCTAAGCATGGCTTGGTGCCGACCA
CGTACATAGCGTTTGCCAAGTCGCAGATCGATTACATCTTGAAAGCTGGC
GGGGACATCAATCCAGAGACTAAGCAGCCTTACTATTCATATCAAATCGG
GTTCGGTGACAACTTTCCCCGGGCTCCCCACCATCGCGGCGCATCTTGTG
GAAACGGCTGGTGTGGATGCTCGGGCAGCCCCCAGCCGAACATCCTGTAC
GGAGCAATAGTTGGTGGGCCTGGAAAGAACGACGACTACTCAGACGATTG
CGGGAACTACGTGACAAATGAGGTGGCAACAGGTAGGTTGTAAAGCGAAT
CCGTTGGTGCAGAGGCGGGGTGCTGGATGCAATGCTTATCGCGATGGCTG
CACGAGGACATGAAACCGCACCTTTCCCTGTAGGAAGCCATACTTCCAAC
ACTCATGACACTTTATTATATTCCAAACAGACTACAACGCTGGATTTACG
TCTGCCTGTGCGGGGCTCGCGCAACTGGTCTTGAAGCTGAAGAGGTAAAT
GGTGTTGGAACATGTTCCCTAATATTTTCAGATGATACTACAAGGGCGAG
AACGAGGAGATGACAATCTAAAACGTATAAAAGAGAAAGAGAACAGAATA
ACATGGGCAAGGTTGTCTCTGGATGTCAGAAAAGACAATTAACGCGCGTA
AAGTCATGGGAATGGCCACAAGCGATAGTCGACGACCTTGTTGATAACAC
ACAATAGTGTGCGTGCATGTGCATGGATATACAAAAACAAGAAAAATATC
TAAATGGCTGAACATGATCGTTTAAGAGCGCACCGATTAGACAGTACTGA
TTTCCTTCACAAGCTCAGCGTCTGTTAAAATTACCTCTTGTCATGCGCTG
CTTTCCTGGAGATTCTGCAGAAGCGGTTATTGGTCATCATGGGACTACGC
GCTATATATTACTGCTCATCACACGCTTTTTACCATTAATGGAATAATAG
AGGTGAATACGCAATTCATCAGTAAAATACAATTGGTAAGGTTGTGTCAG
AAAAAACACTATTAAAATTACAAGGGTTTATGCCTTTCAACGGTCTAACC
ACCAAGAGTCAAGAGGACGCAATGCACAAGTTTCCTTTGAAGTCAAACAG
AATAAAAGGGCCATTTTCCTATCAGGAAAAATGGAAAGAAGGAA back to topCoding sequence (CDS) from alignment at CM002463.1:835932..838475- >rna4527 ID=rna4527|Name=rna4527|organism=Nannochloropsis gaditana|type=CDS|length=4293bp|location=Sequence derived from alignment at CM002463.1:835932..838475- (Nannochloropsis gaditana)
ACTACAACGCTGGATTTACGTCTGCCTGTGCGGGGCTCGCGCAACTGGTC
TTGAAGCTGAAGAGGTAATGGCTATTGGGATGAGCTCGGATGGGCGGCTG
TCTGGCTATACAAGGCGACCAAGGACGCAAAATATCTCGAAATGGCGGAA
AACGACTACTACGACAATTGCTGTGCTGTCACCAACAAGACTGAGTTCTC
GTGGGATCGGAAGTCGTCAGCCGTGCAGCTTATTTTGTACGACTTGACCA
AAAAGGAAAAATACGCGGATGGATTCGCCGGTTTTATGGACAGTTGGATG
TACGAGACGCCCCGAACACCCAAGGGATTAGTATTTTTCGATAAGTGGGC
GCCAAACCGGTACTCGGCCAACACGGCCTTCCTGGCCCTTGTTGCGGCTA
AGCATGGCTTGGTGCCGACCACGTACATAGCGTTTGCCAAGTCGCAGATC
GATTACATCTTGAAAGCTGGCGGGGACATCAATCCAGAGACTAAGCAGCC
TTACTATTCATATCAAATCGGGTTCGGTGACAACTTTCCCCGGGCTCCCC
ACCATCGCGGCGCATCTTGTGGAAACGGCTGGTGTGGATGCTCGGGCAGC
CCCCAGCCGAACATCCTGTACGGAGCAATAGTTGGTGGGCCTGGAAAGAA
CGACGACTACTCAGACGATTGCGGGAACTACGTGACAAATGAGGTGGCAA
CAGATGTTGTGCGTGCACACTCGCCAAAGCTTAGTTGCACTCCTTCTTTT
CGCTGTCAGCTATGGGACCCGTAGCATTGAGGCAAAGTCACTAAGGAGCA
GCGCTAAGGAAAATGGAATTGAGCTTGATTACCCCAAAGCAATGAAGCTC
ACCACATTATTTTATGAGGCACAGCGGAGCGGTAAATTGCCCTCGGACAA
TCGTATTCCTTGGCGTGGCGACAGTGCCCTAAGTGATGGACAGGATCATG
GGCTTGATCTTACAGGCGGCTGGTACGATGCTGGAGATCACGTGAAATTT
AATTTTCCCATGGCATGGAGTGCCACCACGCTGATTTGGGGAGTGTTAGA
ATTTGGTGATGCTTGGAAGAAGACTGGAGAGATGAAAAATATTCTTGATA
CTGTCAAGTGGCCTTTAGATTACCTGCTGAAATGTCATCCAAACGAGGAT
ACATACTATGTGCAGGTCGGAGATGGAAACGCCGATCATTCGTACTGGGG
CGCTGCCGAGTCATTAAATATGAACCGACCTTCCTTTGCCATTACGCCCA
ACAATCCCGGTACGGAGTTTGCAGCTGAAGGGGCCGCGGCTTTAGCGGCT
GGCTCGATACTTTTCGAAGATGATACCGCGTACTCGGCACTGCTCAAGGC
CAAGGCTCGATCCCTTTTTGAGCTTGCTGATAAAAACCGAGGATCGTCCG
ACATATCCTCACCCTTTTACAAGAGTTACAGACTACAACGCTGGATTTAC
GTCTGCCTGTGCGGGGCTCGCGCAACTGGTCTTGAAGCTGAAGAGGTAAT
GGCTATTGGGATGAGCTCGGATGGGCGGCTGTCTGGCTATACAAGGCGAC
CAAGGACGCAAAATATCTCGAAATGGCGGAAAACGACTACTACGACAATT
GCTGTGCTGTCACCAACAAGACTGAGTTCTCGTGGGATCGGAAGTCGTCA
GCCGTGCAGCTTATTTTGTACGACTTGACCAAAAAGGAAAAATACGCGGA
TGGATTCGCCGGTTTTATGGACAGTTGGATGTACGAGACGCCCCGAACAC
CCAAGGGATTAGTATTTTTCGATAAGTGGGCGCCAAACCGGTACTCGGCC
AACACGGCCTTCCTGGCCCTTGTTGCGGCTAAGCATGGCTTGGTGCCGAC
CACGTACATAGCGTTTGCCAAGTCGCAGATCGATTACATCTTGAAAGCTG
GCGGGGACATCAATCCAGAGACTAAGCAGCCTTACTATTCATATCAAATC
GGGTTCGGTGACAACTTTCCCCGGGCTCCCCACCATCGCGGCGCATCTTG
TGGAAACGGCTGGTGTGGATGCTCGGGCAGCCCCCAGCCGAACATCCTGT
ACGGAGCAATAGTTGGTGGGCCTGGAAAGAACGACGACTACTCAGACGAT
TGCGGGAACTACGTGACAAATGAGGTGGCAACAGATGTTGTGCGTGCACA
CTCGCCAAAGCTTAGTTGCACTCCTTCTTTTCGCTGTCAGCTATGGGACC
CGTAGCATTGAGGCAAAGTCACTAAGGAGCAGCGCTAAGGAAAATGGAAT
TGAGCTTGATTACCCCAAAGCAATGAAGCTCACCACATTATTTTATGAGG
CACAGCGGAGCGGTAAATTGCCCTCGGACAATCGTATTCCTTGGCGTGGC
GACAGTGCCCTAAGTGATGGACAGGATCATGGGCTTGATCTTACAGGCGG
CTGGTACGATGCTGGAGATCACGTGAAATTTAATTTTCCCATGGCATGGA
GTGCCACCACGCTGATTTGGGGAGTGTTAGAATTTGGTGATGCTTGGAAG
AAGACTGGAGAGATGAAAAATATTCTTGATACTGTCAAGTGGCCTTTAGA
TTACCTGCTGAAATGTCATCCAAACGAGGATACATACTATGTGCAGGTCG
GAGATGGAAACGCCGATCATTCGTACTGGGGCGCTGCCGAGTCATTAAAT
ATGAACCGACCTTCCTTTGCCATTACGCCCAACAATCCCGGTACGGAGTT
TGCAGCTGAAGGGGCCGCGGCTTTAGCGGCTGGCTCGATACTTTTCGAAG
ATGATACCGCGTACTCGGCACTGCTCAAGGCCAAGGCTCGATCCCTTTTT
GAGCTTGCTGATAAAAACCGAGGATCGTCCGACATATCCTCACCCTTTTA
CAAGAGTTACAGACTACAACGCTGGATTTACGTCTGCCTGTGCGGGGCTC
GCGCAACTGGTCTTGAAGCTGAAGAGGTAATGGCTATTGGGATGAGCTCG
GATGGGCGGCTGTCTGGCTATACAAGGCGACCAAGGACGCAAAATATCTC
GAAATGGCGGAAAACGACTACTACGACAATTGCTGTGCTGTCACCAACAA
GACTGAGTTCTCGTGGGATCGGAAGTCGTCAGCCGTGCAGCTTATTTTGT
ACGACTTGACCAAAAAGGAAAAATACGCGGATGGATTCGCCGGTTTTATG
GACAGTTGGATGTACGAGACGCCCCGAACACCCAAGGGATTAGTATTTTT
CGATAAGTGGGCGCCAAACCGGTACTCGGCCAACACGGCCTTCCTGGCCC
TTGTTGCGGCTAAGCATGGCTTGGTGCCGACCACGTACATAGCGTTTGCC
AAGTCGCAGATCGATTACATCTTGAAAGCTGGCGGGGACATCAATCCAGA
GACTAAGCAGCCTTACTATTCATATCAAATCGGGTTCGGTGACAACTTTC
CCCGGGCTCCCCACCATCGCGGCGCATCTTGTGGAAACGGCTGGTGTGGA
TGCTCGGGCAGCCCCCAGCCGAACATCCTGTACGGAGCAATAGTTGGTGG
GCCTGGAAAGAACGACGACTACTCAGACGATTGCGGGAACTACGTGACAA
ATGAGGTGGCAACAGATGTTGTGCGTGCACACTCGCCAAAGCTTAGTTGC
ACTCCTTCTTTTCGCTGTCAGCTATGGGACCCGTAGCATTGAGGCAAAGT
CACTAAGGAGCAGCGCTAAGGAAAATGGAATTGAGCTTGATTACCCCAAA
GCAATGAAGCTCACCACATTATTTTATGAGGCACAGCGGAGCGGTAAATT
GCCCTCGGACAATCGTATTCCTTGGCGTGGCGACAGTGCCCTAAGTGATG
GACAGGATCATGGGCTTGATCTTACAGGCGGCTGGTACGATGCTGGAGAT
CACGTGAAATTTAATTTTCCCATGGCATGGAGTGCCACCACGCTGATTTG
GGGAGTGTTAGAATTTGGTGATGCTTGGAAGAAGACTGGAGAGATGAAAA
ATATTCTTGATACTGTCAAGTGGCCTTTAGATTACCTGCTGAAATGTCAT
CCAAACGAGGATACATACTATGTGCAGGTCGGAGATGGAAACGCCGATCA
TTCGTACTGGGGCGCTGCCGAGTCATTAAATATGAACCGACCTTCCTTTG
CCATTACGCCCAACAATCCCGGTACGGAGTTTGCAGCTGAAGGGGCCGCG
GCTTTAGCGGCTGGCTCGATACTTTTCGAAGATGATACCGCGTACTCGGC
ACTGCTCAAGGCCAAGGCTCGATCCCTTTTTGAGCTTGCTGATAAAAACC
GAGGATCGTCCGACATATCCTCACCCTTTTACAAGAGTTACAG back to top
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