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Properties
| Property Name | Value |
|---|
| Product | atlastin-like protein |
| Orig transcript id | gnl|cribi|Naga_100014g4.9328.mrna |
| Orig protein id | gnl|cribi|Naga_100014g4.9328 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:833353..835718 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4526 ID=rna4526|Name=rna4526|organism=Nannochloropsis gaditana|type=mRNA|length=3062bp
TCTATGCATGCTTCACTCATTCACGTTCTCAGGTCAGATCGCCTCGGATA
GTGCGTTGCTTCGTGCTGCAGGTTCAGGAACGGGCTACGTACCATCACAA
AACTATGGATCTCAGATAGGAGTGCCGACACGTGACCGTTTCCGACTTCA
ATTTTCGAGTAGCAGCATCAGTGGCGCGCTGGAGTATGGAGGACGTTGGC
AGGATCGAGCCTTCGGACAGCAAGGGACTCTCCGACACCCATTCCGGTGA
CGTGAACTGGGTCGCTGTCGGCAGAGAAGCCATGGAGGACGACGGATTGC
GCAGCATGAAACGCCTTCGCGAGGATATAACACCGTCACCATCGCTGCTC
TCGTGTTACAATCCCAGCAGCGGACAGTCAGGCCTCGCAGGGGACGTGGA
CTTCGCAAGAGTCTTCGACGACTACCCCCTCCCTGCCCCGGGCCCTCTGC
CAACCCCTCAGCCGCGACCTGCACCAGCTGCAGGGGCAACGAGCAAAGCA
GCTGTCGGCGAAGCGTTGGTGTCGCCGGGAAGGGAGGGCGAGGCACGAGC
AGGCTCGCCGCTTCTAGGTGGGGATCCGGGGCCTGGCGCACCGGGCAATC
AGCGACAGGCCTCCACGGCCGTCCACGCTTGCAAGGCCGCGATGGGCAAG
ACGGAGGATAGCATACAGGCAAGCGGCTCAAGTGCGCCTCCGCCCCCCTC
ATCGCAGGCGCTGGAGTCCACCGAATTGGAGAGTCCGGCCTGTGGATCCC
CGCTCCGCCTAGACCACCTCTCGCCGTTCCTCGTCTCGGTGCCAGGGCCG
CTGACAGCCGATGGGGGCCAACATGGCTACCCTCCCCCTGGCGGTGCAAA
CCAAGCCTCCCCGCCCTTCAGGCCCATGCTCGCCCCCACCTCCCTGAGCA
GGCAAGCCTCCCTGTTGAGCCAGCCCCCCGCTTGGGAGGACCTCGGAGGG
CTCTACGACATCCAGTCCGGGAGTCACGGTCTGGAGCGAGCGGGGACGCC
AAGCGAGTCCTCGTCTTGGCCGCTTGCGGAGGTCGCCGCGGGTCGGGAGG
CAGCTTGTGGGGGGCCGGAGGGGGAGTTACCGGGGGAGGAAAGGGGGAGG
CAGTCGGGCGGCTCTCCTTCTTGTCATGTGGCCGGTCTGTTGAGCCGTGA
AAGCTCGAGCGAGGGGCCCTCCCTGAGTGGAGGTAGGGCAGGGGGAGCAA
GAGGAGGGAAGAGAGGCGACGTGGCTTTGACACGGCGGCCCTCGGTGGAG
GAAGTGCATGGACCTCCGGGAATCCCCCGGAGGGGAAGTATCTCCTCGTC
GCGCAGCAGCAAAAGTATCCTAGTCAGGGAGGACAAGCACGGGAGCTTTT
TGACGGGTTTTAACGGGAAGGGGGAAGAGGGGGGATGGACAGGCTACGGA
GGGGAGGGGGACGACGGGGAGTGGGAGGGCATGGCGGGCGTATCGGGGGA
ACCCTCTTTGCCGAGGCGACCCGACCGAGCCATACGCCTCCCGGGTCCGG
CCAGGGCCATCATGCGGTCCGGAGAAGCCACTGCGGTGGGGGAGAAAGGG
GCCTTTGAGTGCGGCCGGGGTGCCGGGGTGTCCTCGTCGACGAGTGGACA
GGAGCGAGGAGGGCATGCCGTCTCCTCTGCCTTGCGTCATCTCCCCGACA
GCGTAAGCTCCCGCCCGGGCCCTCCTGTGCAGAAAGGGGAGTCCGAGATG
TTCTTCTCCCCTACCATGGACCAAAGTGCTTCCTCTCCCGGCACCGCGTC
GCAATCCAACACCCTGCCGCCCCACCAATCAGTCTCCCTTCGACCCGAGG
CGGGAAGCTCGACAGGCGGACATGTAGCCGCTGCAGAGAGGGAAGGCGAC
AGTTGCGAGCTTGCCAGTGCGTGGGAACGCATCGGGCCAGAGTATCAGGC
GGTGCTCCCCGACCTGCTCGATGACATGCTTTTTCACCGGACAGGGAAGG
ATGAGGAGGCACCGGGTGAAGGCGTTAGACTCTTGTCAGACGCCCGGCCC
TCGAGCGTTGACACTTTAGGCGCGGCGGGGGCCCACAGCGACGAGGCTTC
GGGGGCCGAGCAGGAGGCTGTCCTCGTCTGGTCGTCTGGGTGGGAAGAGG
GCAGTCTCGAGCGAGTGGTGGCCGCAACGGGAGGCGGGCGGGCAAGCGCC
GCGCGGGAGTGGTCCGTGGCTGAGATCGCGGATTTTGATAAGGGCGTGCA
CGCCTACCGTCGTTGTTTCGATATCATCCACCGGAAATGTCTGCCGGGAA
AAAGCGTCAGGAGGATCGTGGCCTGGTTCTACGACGAGTTCAAGCGGTCG
CCAGGCTACCGGGCCTGGAAAGAGGATAAGTTGATAGGGCGCCGGGTGGT
GCTCCGGCAGAAGCGGCCAAGATGGAAAGGAGGAGGCTGGGAGGAAGTAA
AAGGGACGATTCAAGGCAGTATTCGCGACGAAGAAGGCGACGAGTTACTG
ACCTTGAACTACGACGACGGCCGGGTGGGGCAACTCTACCGGTACGAAGC
GGAGCCTCTCTTGCTGGGACCGGGTGACGAGGGAGAAAGGGAGGAGGTCA
AGGACGGGAGGGTGGAGAGCGAAGCCTCTGGGGTAACGTCGCAGGAAGAA
GGGACCTCTATTTCGAGCCCATCGTCTTCGGCGGGCGAGCACATGGACGT
GTCGCTGAACGCAGAGAAAGCGGAATCGGCGCAGAACGCCGACGAGGTAG
ACGGGTTGGAAGAGGGAGAAAGTGACAAGCAAACCTAAGGTAGTGTTTCC
GTTCAGTGCTCTCGACCTGAATTATATGAGACGCGATGAGCCTTTGCGAA
AACTCTGCAGTTAGAGTGCCTAGAGCGCATTTCCACATATGCTGTACCAA
GACATTGTATTTATGTATGCATGATGTGATATTCATTCTGAAGTGGACAG
CCTTGAACGTGCGGGTTCACTTCGCAAAAGCTATTAACTAAAGGCCTCTT
TCCAGGCAGCATGTGTGCGATGTATCGAAGGCGCCCTGGCATGGCAGTAA
ACGTGAACAGTAGACGCGCGAGCGAAGTAAAAGACAACATCCGGCATGAG
CGCGAACATACG back to topprotein sequence of rna4526 >rna4526-protein ID=rna4526-protein|Name=rna4526|organism=Nannochloropsis gaditana|type=polypeptide|length=593bp
MCLTDKSTIIMADGTGLAAAHADASKTKPSPRPLQIIRLGTAEENYSFHL
EQANLDSIMAQVPSDMKVAVVSVVGAFRTGKSFLLTFLLRYLRYGSVLDD
SEDWMTAAGDVREGNINEKVLAGDDGRNALESSFQWRAGKERTTTGIWMW
SEAFVRRVANGEEVAVLLMDTQGMFDNETSMNLTACIFGLSTLLSSYQIY
NVQNRIQEDNLQHLALFSEYGRIALAGEAGKLVRQGNKQGDEGADKGLEE
KSEGGMEAEELMLPDEDEIPFQRVEFLVRDWMDFDEDLPFHQLKEEMDSY
LQDVIEKGSVKDLRQTREQILGCFQKVRCFVLPHPGLEVPKKAYSGEVAL
INPFFRRLLNHYAREVFGPELEAKRIHKRDLTAPELRQYVSSYVEMFKSG
TRFPEAQTMLEATASANNQNATQLALSKYKGEMDAYCGPRVYEYRKVDDF
MAHHRACKDAALQLFDSTATIGRKAQVREFRVRVLDEIEDLFSRYEEANA
NRNPFRNFEYYALPLLVALAAFVMRWIADLESTCSLERRYLCTNVSNAMG
HVYVFLITFILILSFNRVKLFVDYVRQVVPVLLGMDRMHLKKA back to topmRNA from alignment at CM002463.1:833353..835718- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4526 ID=rna4526|Name=rna4526|organism=Nannochloropsis gaditana|type=mRNA|length=2366bp|location=Sequence derived from alignment at CM002463.1:833353..835718- (Nannochloropsis gaditana)
GTGTAACAGCGGTACCAGGGGCAGTAGCATGATGAAGTCCGGACGAGGCC
ATATGACTATTAATTCATGTGGGGTGAAGTCGCATGGAATGACCGACTGA
CGCTCCTCATATAAAAATGTGTTTGACAGATAAAAGCACAATTATCATGG
CGGACGGTACTGGACTCGCTGCCGCGCATGCCGATGCGAGCAAGACAAAG
CCGTCTCCAAGACCTCTGCAAATCATCCGCCTAGGGACAGCAGAGGAAAA
CTATTCCTTCCATTTAGAGCAAGCAAATTTGGACAGCATCATGGCACAAG
TACCATCAGATATGAAGGTTGCCGTCGTCTCCGTGGTGGGGGCTTTTCGT
ACAGGAAAATCTTTTTTGTTGACCTTCTTGCTTCGTTACCTGCGGTATGG
ATCCGTGTTGGACGACAGTGAGGATTGGATGACAGCTGCAGGGGACGTGA
GGGAGGGGAACATAAACGAAAAGGTCTTGGCCGGTGACGACGGTCGAAAC
GCGTTGGAGTCTAGTTTTCAATGGCGCGCGGGGAAGGAACGCACGACAAC
GGGCATTTGGATGTGGTCGGAAGCCTTTGTGCGACGAGTGGCGAACGGGG
AGGAGGTGGCCGTGTTGCTGATGGACACGCAGGGCATGTTCGACAACGAG
ACGTCGATGAATTTGACGGCTTGCATTTTCGGCCTCAGCACCCTGCTTTC
CTCCTACCAGATTTACAATGTCCAGAACCGGATCCAAGAAGACAACCTGC
AGCACCTGGCTTTGTTTTCCGAGTACGGCCGCATCGCCCTCGCAGGGGAG
GCCGGGAAGCTGGTGCGGCAAGGCAATAAACAAGGTGACGAAGGGGCAGA
CAAAGGGCTCGAGGAGAAGAGCGAGGGGGGGATGGAGGCGGAGGAATTGA
TGCTGCCTGACGAGGACGAGATCCCCTTTCAACGTGTGGAATTCCTGGTG
CGCGACTGGATGGACTTCGATGAGGACCTGCCCTTCCACCAACTTAAGGT
AATTATGTTTTCGCTATTTTCAACCCGTCATGTGTGTCATTGCCCTAAGT
CTGCCCAAACCCATTCTCGATTTTTTCCGCTCTCCCTCGTCTTCTCCTGG
GGACCGAGCAGAAAGCCTATCGAGCTGGCAGTATGCTGACGTTCCCTTTC
CCCTGCTCCATTCCTTACCGTTTCGTCGATGCCTCTCTTAGGAGGAGATG
GACTCGTACTTGCAGGACGTGATCGAAAAAGGTTCCGTCAAAGACCTGCG
CCAGACGAGGGAGCAGATTCTGGGCTGCTTCCAGAAGGTTCGTTGCTTCG
TCCTCCCTCACCCAGGCCTGGAGGTTCCCAAGAAGGCTTACAGCGGGGAG
GTGGCCCTGATCAACCCCTTTTTCCGTCGGCTTTTAAACCACTACGCCCG
CGAGGTTTTCGGGCCCGAGCTCGAGGCCAAGCGCATCCACAAGCGGGACT
TGACGGCCCCGGAGCTCCGGCAGTACGTGTCGAGCTACGTGGAAATGTTC
AAGAGTGGGACGCGGTTTCCCGAGGCTCAGACAATGCTGGAAGCCACGGC
CTCGGCCAACAACCAAAATGCGACCCAGCTGGCCTTGAGTAAGTACAAAG
GGGAAATGGATGCGTATTGCGGGCCCCGAGTGTACGAGTACCGGAAGGTG
GACGACTTTATGGCACATCACCGGGCATGCAAAGATGCGGCCTTGCAGCT
CTTTGACTCGACTGCTACCATTGGTCGCAAAGCTCAGGTGCGGGAATTTC
GTGTGCGAGTCTTGGATGAGATCGAGGATCTGTTCAGTCGTTATGAGGAG
GCCAACGCAAACAGGAATCCCTTCCGTAATTTCGAGTATTACGCCCTTCC
TTTGCTGGTCGCCTTGGCGGCTTTTGTAATGAGATGGATCGCAGACCTGG
AGTCCACGTGTTCACTGGAGCGGCGATATCTGTGCACCAATGTATCCAAT
GCCATGGGTCATGTATACGTGTTTTTAATCACCTTCATTCTTATTTTGTC
TTTCAACCGTGTCAAGCTGTTCGTAGATTATGTTCGACAAGTGGTACCTG
TGTTGCTAGGGATGGATAGGATGCATCTGAAGAAGGCGTGAACAAAGCAT
GATTGGAGAGGATGATCGCGGAGAGTGTGCGCCCATGGATGACGGGCAGC
GAAAATTGTCGCCTTGGAGACAGTTATCGAGAGCAGGCTCTTAAAGTGAT
ATTGCACTCGAATCGCTCAGTTAAAAAAATCGTGCTCGATGAACGAAAGA
AAAGACCACGAGGCGAGCTTGACACCGTGGAGTGAATCCTTCGCGGAAGA
CGTGTCGAGAAAAGACTACCCGGAGGCTCCTCCTTCATCCCCCCCCCCTC
AAATTCAATCGATGAT back to topCoding sequence (CDS) from alignment at CM002463.1:833353..835718- >rna4526 ID=rna4526|Name=rna4526|organism=Nannochloropsis gaditana|type=CDS|length=3564bp|location=Sequence derived from alignment at CM002463.1:833353..835718- (Nannochloropsis gaditana)
GAGGAGATGGACTCGTACTTGCAGGACGTGATCGAAAAAGGTTCCGTCAA
AGACCTGCGCCAGACGAGGGAGCAGATTCTGGGCTGCTTCCAGAAGGTTC
GTTGCTTCGTCCTCCCTCACCCAGGCCTGGAGGTTCCCAAGAAGGCTTAC
AGCGGGGAGGTGGCCCTGATCAACCCCTTTTTCCGTCGGCTTTTAAACCA
CTACGCCCGCGAGGTTTTCGGGCCCGAGCTCGAGGCCAAGCGCATCCACA
AGCGGGACTTGACGGCCCCGGAGCTCCGGCAGTACGTGTCGAGCTACGTG
GAAATGTTCAAGAGTGGGACGCGGTTTCCCGAGGCTCAGACAATGCTGGA
AGCCACGGCCTCGGCCAACAACCAAAATGCGACCCAGCTGGCCTTGAGTA
AGTACAAAGGGGAAATGGATGCGTATTGCGGGCCCCGAGTGTACGAGTAC
CGGAAGGTGGACGACTTTATGGCACATCACCGGGCATGCAAAGATGCGGC
CTTGCAGCTCTTTGACTCGACTGCTACCATTGGTCGCAAAGCTCAGGTGC
GGGAATTTCGTGTGCGAGTCTTGGATGAGATCGAGGATCTGTTCAGTCGT
TATGAGGAGGCCAACGCAAACAGGAATCCCTTCCGTAATTTCGAGTATTA
CGCCCTTCCTTTGCTGGTCGCCTTGGCGGCTTTTGTAATGAGATGGATCG
CAGACCTGGAGTCCACGTGTTCACTGGAGCGGCGATATCTGTGCACCAAT
GTATCCAATGCCATGGGTCATGTATACGTGTTTTTAATCACCTTCATTCT
TATTTTGTCTTTCAACCGTGTCAAGCTGTTCGTAGATTATGTTCGACAAG
TGGTACCTGTGTTGCTAGGGATGGATAGGATGCATCTGAAGAAGGCGTGA
ATGTGTTTGACAGATAAAAGCACAATTATCATGGCGGACGGTACTGGACT
CGCTGCCGCGCATGCCGATGCGAGCAAGACAAAGCCGTCTCCAAGACCTC
TGCAAATCATCCGCCTAGGGACAGCAGAGGAAAACTATTCCTTCCATTTA
GAGCAAGCAAATTTGGACAGCATCATGGCACAAGTACCATCAGATATGAA
GGTTGCCGTCGTCTCCGTGGTGGGGGCTTTTCGTACAGGAAAATCTTTTT
TGTTGACCTTCTTGCTTCGTTACCTGCGGTATGGATCCGTGTTGGACGAC
AGTGAGGATTGGATGACAGCTGCAGGGGACGTGAGGGAGGGGAACATAAA
CGAAAAGGTCTTGGCCGGTGACGACGGTCGAAACGCGTTGGAGTCTAGTT
TTCAATGGCGCGCGGGGAAGGAACGCACGACAACGGGCATTTGGATGTGG
TCGGAAGCCTTTGTGCGACGAGTGGCGAACGGGGAGGAGGTGGCCGTGTT
GCTGATGGACACGCAGGGCATGTTCGACAACGAGACGTCGATGAATTTGA
CGGCTTGCATTTTCGGCCTCAGCACCCTGCTTTCCTCCTACCAGATTTAC
AATGTCCAGAACCGGATCCAAGAAGACAACCTGCAGCACCTGGCTTTGTT
TTCCGAGTACGGCCGCATCGCCCTCGCAGGGGAGGCCGGGAAGCTGGTGC
GGCAAGGCAATAAACAAGGTGACGAAGGGGCAGACAAAGGGCTCGAGGAG
AAGAGCGAGGGGGGGATGGAGGCGGAGGAATTGATGCTGCCTGACGAGGA
CGAGATCCCCTTTCAACGTGTGGAATTCCTGGTGCGCGACTGGATGGACT
TCGATGAGGACCTGCCCTTCCACCAACTTAAGGAGGAGATGGACTCGTAC
TTGCAGGACGTGATCGAAAAAGGTTCCGTCAAAGACCTGCGCCAGACGAG
GGAGCAGATTCTGGGCTGCTTCCAGAAGGTTCGTTGCTTCGTCCTCCCTC
ACCCAGGCCTGGAGGTTCCCAAGAAGGCTTACAGCGGGGAGGTGGCCCTG
ATCAACCCCTTTTTCCGTCGGCTTTTAAACCACTACGCCCGCGAGGTTTT
CGGGCCCGAGCTCGAGGCCAAGCGCATCCACAAGCGGGACTTGACGGCCC
CGGAGCTCCGGCAGTACGTGTCGAGCTACGTGGAAATGTTCAAGAGTGGG
ACGCGGTTTCCCGAGGCTCAGACAATGCTGGAAGCCACGGCCTCGGCCAA
CAACCAAAATGCGACCCAGCTGGCCTTGAGTAAGTACAAAGGGGAAATGG
ATGCGTATTGCGGGCCCCGAGTGTACGAGTACCGGAAGGTGGACGACTTT
ATGGCACATCACCGGGCATGCAAAGATGCGGCCTTGCAGCTCTTTGACTC
GACTGCTACCATTGGTCGCAAAGCTCAGGTGCGGGAATTTCGTGTGCGAG
TCTTGGATGAGATCGAGGATCTGTTCAGTCGTTATGAGGAGGCCAACGCA
AACAGGAATCCCTTCCGTAATTTCGAGTATTACGCCCTTCCTTTGCTGGT
CGCCTTGGCGGCTTTTGTAATGAGATGGATCGCAGACCTGGAGTCCACGT
GTTCACTGGAGCGGCGATATCTGTGCACCAATGTATCCAATGCCATGGGT
CATGTATACGTGTTTTTAATCACCTTCATTCTTATTTTGTCTTTCAACCG
TGTCAAGCTGTTCGTAGATTATGTTCGACAAGTGGTACCTGTGTTGCTAG
GGATGGATAGGATGCATCTGAAGAAGGCGTGAATGTGTTTGACAGATAAA
AGCACAATTATCATGGCGGACGGTACTGGACTCGCTGCCGCGCATGCCGA
TGCGAGCAAGACAAAGCCGTCTCCAAGACCTCTGCAAATCATCCGCCTAG
GGACAGCAGAGGAAAACTATTCCTTCCATTTAGAGCAAGCAAATTTGGAC
AGCATCATGGCACAAGTACCATCAGATATGAAGGTTGCCGTCGTCTCCGT
GGTGGGGGCTTTTCGTACAGGAAAATCTTTTTTGTTGACCTTCTTGCTTC
GTTACCTGCGGTATGGATCCGTGTTGGACGACAGTGAGGATTGGATGACA
GCTGCAGGGGACGTGAGGGAGGGGAACATAAACGAAAAGGTCTTGGCCGG
TGACGACGGTCGAAACGCGTTGGAGTCTAGTTTTCAATGGCGCGCGGGGA
AGGAACGCACGACAACGGGCATTTGGATGTGGTCGGAAGCCTTTGTGCGA
CGAGTGGCGAACGGGGAGGAGGTGGCCGTGTTGCTGATGGACACGCAGGG
CATGTTCGACAACGAGACGTCGATGAATTTGACGGCTTGCATTTTCGGCC
TCAGCACCCTGCTTTCCTCCTACCAGATTTACAATGTCCAGAACCGGATC
CAAGAAGACAACCTGCAGCACCTGGCTTTGTTTTCCGAGTACGGCCGCAT
CGCCCTCGCAGGGGAGGCCGGGAAGCTGGTGCGGCAAGGCAATAAACAAG
GTGACGAAGGGGCAGACAAAGGGCTCGAGGAGAAGAGCGAGGGGGGGATG
GAGGCGGAGGAATTGATGCTGCCTGACGAGGACGAGATCCCCTTTCAACG
TGTGGAATTCCTGGTGCGCGACTGGATGGACTTCGATGAGGACCTGCCCT
TCCACCAACTTAAG back to top
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