rna4523, rna4523 (mRNA) Nannochloropsis gaditana

Overview
Namerna4523
Unique Namerna4523
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1212
Alignment locationCM002463.1:826567..827477 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100014g1.9331.mrna
Orig protein idgnl|cribi|Naga_100014g1.9331
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:826567..827477 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100014g1gene4365Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4523rna4523-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26154.1cds4512Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4523 ID=rna4523|Name=rna4523|organism=Nannochloropsis gaditana|type=mRNA|length=1212bp
CTCCCTCCCCCCCCCCCTCCCCTGGCCCTAGTCTGCCTCTCCCTCCTTGG
CACCTGGTCGGGCGAGCCCTGGGACCCCGCGCACTCGAACCTCTCGCAGC
TCTTCATCTCCATCCTCGCCTTCATCTTCACCACGGAGCCGCTGCGCAAC
GAGCCCGGCCTGGAGGCCTCCTCCCCGGCCACGGTCGCCCTGTACAACGC
CTACCTCCGACTGGAGACCCTGCGGACCGCCATGATCGGGACCCTCGCCC
GCCCGCCCGCCCTCCCGCCCTCCGAGTTCGAAGGGGTGGTCAAGCAGCAT
TTCCGGGAAGCGTGGGCGGGGGCGATCCGTCCAGATTTGATGCAGTGGGG
GGAGAGGGAGGTGCTGGGGGAGGGAGGGAGGGAGGGAGGGAAGGAAGGGG
GGAAGGAGTGCTGGGCGGCTATCTCCGGGCAGATAACCCGGATGGGCTGG
TTCCAGCAAGCTGTGGGAAAAAAGAGGTACAAGGCGATGATGAAGGCGCT
GGTGGAGAGCATGGACGCGCTGGTGGCGGGTCTGGAGGGGGAAGGGGGGG
AAGGAGGCGGGGGCGGGGGGGCGACCGAGGCAGTTTGCAGACAGGGGCCT
CTGGGATGCGGGACGGAAGCGCAGGGGCGGTGGCGTCCGAGGCGTCGGGG
GGGGAAAGGGGAAGCCTCGGGGGGGGCGGGCACAGGCTGGAAGGCTGACG
GGGATCGTAGGCAGGAGGGGGAAGGAAAGAAGGAGAGCAGGTCGGGGGAG
GGAGAGCGTAGCGCCGGTGAGGAGGGAATGGGGGCAGACGGGTGGGGCTG
TGGGAGGAGCGAGGCTGCCTTTTCGCATGGACGCGACAGGGAGCGGGTGA
GAAGAGAGCCATGGGCTTAGGGGGGCACAGGGAGGCTCGCGAGTGGAGAT
TGATGGGGGTTAGAGGGAGGGAAAGGCTCTAAAGAGAGCAGAGGGGCAGT
ACAAGGCAGAAGAGTGTAGGGGAAGGGGAGGGAGGGCGGGGGGGGGCTTC
CTCGCCCAGGGGCCAAGGAGGTGAGGAAGGTTGTGGAGGTTGGGATGGGG
GGGAGGGAGAGCGGCATTATACCCGCACATGTAAAGGCAGCGGAGAAGAC
GCTCAGTTTGAATTATCGATCTCGTGCATCCGTCGCGGGTTGTCAGGCCC
CCCTTGTTGCTTTCTCTCGCCATCCCCCTCCTGATTGAGCGCCTTGTCTT
CACCACTCCCCT
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protein sequence of rna4523

>rna4523-protein ID=rna4523-protein|Name=rna4523|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MAAPVLTMEHIRQDLARKPPPEPSTISADECHASLRDLALCLLFQQQLCL
QKKISNYNFAGIDSVDERFVQALKSEHGSTIRALVEATTALSISTHEEGK
WRGEDGPLMAVLWEEQDEVEEDGAAQENRGTKDRYLALLERHELLPVCIS
LPVSPPSSCYQSDTARTSSDESEHQSMRDIERDSLVVNGAPYKPGGVGGH
MRVLSWLKHVVQTQLGSTGCPHALGEEPV
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mRNA from alignment at CM002463.1:826567..827477-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4523 ID=rna4523|Name=rna4523|organism=Nannochloropsis gaditana|type=mRNA|length=911bp|location=Sequence derived from alignment at CM002463.1:826567..827477- (Nannochloropsis gaditana)
ATGGCTGCCCCTGTACTCACGATGGAGCATATAAGGCAAGATCTTGCCCG
AAAACCGCCGCCTGAGCCCTCAACCATCTCGGCGGATGAATGCCATGCCA
GTCTACGTGACTTGGCCCTGTGTCTGCTCTTTCAGCAGCAACTATGCCTA
CAAAAAAAAATCAGCAATTACAACTTTGCCGGCATTGACAGTGTAGACGA
GCGCTTTGTCCAGGCGCTGAAATCGGAGCATGGAAGCACCATCCGAGCCT
TGGTTGAGGCGACGACGGCTCTATCGATCTCGACGCATGAAGAGGGCAAA
TGGCGGGGGGAGGACGGGCCCCTGATGGCTGTCCTATGGGAGGAGCAGGA
TGAAGTCGAAGAAGATGGGGCGGCACAGGAGAATCGGGGGACAAAGGACC
GGTATTTGGCATTGTTAGAAAGGCACGAGCTCCTTCCCGTGTGCATTTCT
CTCCCCGTCTCGCCCCCCTCCTCCTGCTATCAGAGCGACACCGCCCGCAC
AAGCAGCGATGAGAGCGAACATCAGAGCATGAGGGACATTGAGCGGGACA
GCCTGGTAGTCAACGGCGCACCCTACAAGCCTGGTGGCGTCGGCGGGCAC
ATGCGCGTCTTGTCCTGGTTGAAACACGTGGTGCAAACGCAGCTGGGAAG
CACAGGGTGCCCGCATGCTTTGGGAGAGGAGGTGGGTACCTTCATCCGAC
ACATCCTCCGGCAAATTAATAGGACGAACTCGGCAGGGTCGGCGTACGAC
TTGCTGGTCCGGCGTTTGGGCGTGGAGGGGGTGGTGGCTACGGTCCCGGA
CTCGAAAGCTGCCGAGCCTCTCGAAATCGACGTGGACACGGGGGCCTTCC
CTCTCCCTGCTTCCCTCCCTCCCTCCCTTCCCCCCTCCATCCCTCCTTCC
AGCCCGTCTGA
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Coding sequence (CDS) from alignment at CM002463.1:826567..827477-

>rna4523 ID=rna4523|Name=rna4523|organism=Nannochloropsis gaditana|type=CDS|length=1380bp|location=Sequence derived from alignment at CM002463.1:826567..827477- (Nannochloropsis gaditana)
CCCGTCTGAATGGCTGCCCCTGTACTCACGATGGAGCATATAAGGCAAGA
TCTTGCCCGAAAACCGCCGCCTGAGCCCTCAACCATCTCGGCGGATGAAT
GCCATGCCAGTCTACGTGACTTGGCCCTGTGTCTGCTCTTTCAGCAGCAA
CTATGCCTACAAAAAAAAATCAGCAATTACAACTTTGCCGGCATTGACAG
TGTAGACGAGCGCTTTGTCCAGGCGCTGAAATCGGAGCATGGAAGCACCA
TCCGAGCCTTGGTTGAGGCGACGACGGCTCTATCGATCTCGACGCATGAA
GAGGGCAAATGGCGGGGGGAGGACGGGCCCCTGATGGCTGTCCTATGGGA
GGAGCAGGATGAAGTCGAAGAAGATGGGGCGGCACAGGAGAATCGGGGGA
CAAAGGACCGGTATTTGGCATTGTTAGAAAGGCACGAGCTCCTTCCCGTG
TGCATTTCTCTCCCCGTCTCGCCCCCCTCCTCCTGCTATCAGAGCGACAC
CGCCCGCACAAGCAGCGATGAGAGCGAACATCAGAGCATGAGGGACATTG
AGCGGGACAGCCTGGTAGTCAACGGCGCACCCTACAAGCCTGGTGGCGTC
GGCGGGCACATGCGCGTCTTGTCCTGGTTGAAACACGTGGTGCAAACGCA
GCTGGGAAGCACAGGGTGCCCGCATGCTTTGGGAGAGGAGCCCGTCTGAA
TGGCTGCCCCTGTACTCACGATGGAGCATATAAGGCAAGATCTTGCCCGA
AAACCGCCGCCTGAGCCCTCAACCATCTCGGCGGATGAATGCCATGCCAG
TCTACGTGACTTGGCCCTGTGTCTGCTCTTTCAGCAGCAACTATGCCTAC
AAAAAAAAATCAGCAATTACAACTTTGCCGGCATTGACAGTGTAGACGAG
CGCTTTGTCCAGGCGCTGAAATCGGAGCATGGAAGCACCATCCGAGCCTT
GGTTGAGGCGACGACGGCTCTATCGATCTCGACGCATGAAGAGGGCAAAT
GGCGGGGGGAGGACGGGCCCCTGATGGCTGTCCTATGGGAGGAGCAGGAT
GAAGTCGAAGAAGATGGGGCGGCACAGGAGAATCGGGGGACAAAGGACCG
GTATTTGGCATTGTTAGAAAGGCACGAGCTCCTTCCCGTGTGCATTTCTC
TCCCCGTCTCGCCCCCCTCCTCCTGCTATCAGAGCGACACCGCCCGCACA
AGCAGCGATGAGAGCGAACATCAGAGCATGAGGGACATTGAGCGGGACAG
CCTGGTAGTCAACGGCGCACCCTACAAGCCTGGTGGCGTCGGCGGGCACA
TGCGCGTCTTGTCCTGGTTGAAACACGTGGTGCAAACGCAGCTGGGAAGC
ACAGGGTGCCCGCATGCTTTGGGAGAGGAG
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Synonyms
Publications