rna4507, rna4507 (mRNA) Nannochloropsis gaditana

Overview
Namerna4507
Unique Namerna4507
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length537
Alignment locationCM002463.1:774397..775162 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100072g2.8017.mrna
Orig protein idgnl|cribi|Naga_100072g2.8017
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:774397..775162 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100072g2gene4349Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4507rna4507-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26184.1cds4496Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4507 ID=rna4507|Name=rna4507|organism=Nannochloropsis gaditana|type=mRNA|length=537bp
ATGCTTACAGACAGCAAGGTTTTGAGTATCTTTGTTGGAGAGGGCAAGTG
TCAGGAGGTTTTCGTGGCCGGGAATGTGGAAAGTTTTAGTTCGATGGAGG
CCTGTTGCAGGACTTCCTTTTCGCATCACTCTGATCCCATTGCCAGGAGA
GGTATGACAAGCGTGTCGCGATTAGCACTGTGGGCAGTGGTGAACGTTCA
GCACGCGGGTTTTCATACCACAATCTACGACAATAAGGAGGCTTGGAACC
TGGTGCTTGTTGCGATAGAAGCAAATCAACTTCAGGAATTAGAGCGAATG
GGTATAGTGTGCGATCTCCTTTTACAAAGACAAACACTACTGTGTAAGGA
GAAGGGGTCCATTGAGCAAGGAGAAGTGAAAATGTTGCTGACAAGATTGA
CCGATGTAGTGCAAAGGTTTGAAATTTGGAAGGGGGAAAGTCCAGCGTAC
TGGAATGGCCGATTATTTTTACATGAAATGGAGTATTCTACAATATTTGA
TGAGGCTGGAGGTTTGTGCGAGATGAGGGATGTCTAG
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protein sequence of rna4507

>rna4507-protein ID=rna4507-protein|Name=rna4507|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MAWELSRSHFALIHETRVLSLHQGHTLPPRVCYGFRCALRILSKTSCPLV
LFLFLLQLQRRASMHHEWDEQGLLPSDVVAPLAYDVHLALAGPPDLATKG
MVDVTIVVKRPTAVVRLHSVGLNINSASVGFPDGTFTATEIYSTSPQIVA
IDIKSPLSIGQYIFNECKGRTSTFRRVEASRRGRICPVFTAKTGYHLFAA
GARLGNGGLGGDYHLKRLPPRLSHH
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mRNA from alignment at CM002463.1:774397..775162-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4507 ID=rna4507|Name=rna4507|organism=Nannochloropsis gaditana|type=mRNA|length=766bp|location=Sequence derived from alignment at CM002463.1:774397..775162- (Nannochloropsis gaditana)
ATGGCATGGGAGTTATCGCGCTCACACTTCGCCCTCATCCACGAAACTCG
TGTCCTGTCCCTTCATCAGGGCCATACGCTGCCGCCGCGGGTGTGTTATG
GTTTTCGATGTGCCTTGAGGATATTGAGCAAAACCTCCTGCCCCCTCGTG
CTTTTTTTGTTCCTGCTCCAGCTTCAGAGACGAGCTTCCATGCACCACGA
GTGGGACGAGCAAGGCCTCTTGCCAAGTGACGTTGTCGCACCACTTGCCT
ACGATGTGCACCTGGCGCTCGCGGGACCTCCCGATTTGGCCACAAAGGGA
ATGGTCGATGTCACTATCGTGGTAAAGCGGCCCACGGCAGTCGTCCGGCT
GCATTCAGTCGGATTGAATATAAACTCAGCAAGCGTAGGGTTTCCAGATG
GTACATTTACCGCAACGGAAATATATTCTACCTCTCCGCAAATAGTCGCC
ATCGACATAAAATCACCCTTGTCGATTGGTCAGTACATCGTACGTCTCTC
CTTTTCAGGAAGAATAGGGACAATAGGCCATCCATAACGCATGCATGTGT
TTTCATTTTTTCGGGCATTTTTCACAGTTTAATGAATGTAAGGGACGTAC
ATCTACCTTTCGGAGAGTCGAAGCTAGCCGTAGGGGAAGAATATGCCCTG
TATTCACTGCCAAAACTGGATATCATCTGTTTGCCGCAGGTGCACGGCTT
GGGAATGGAGGGCTGGGGGGCGATTACCATCTTAAAAGACTACCTCCTCG
TCTCTCCCACCACTAG
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Coding sequence (CDS) from alignment at CM002463.1:774397..775162-

>rna4507 ID=rna4507|Name=rna4507|organism=Nannochloropsis gaditana|type=CDS|length=1356bp|location=Sequence derived from alignment at CM002463.1:774397..775162- (Nannochloropsis gaditana)
TTTAATGAATGTAAGGGACGTACATCTACCTTTCGGAGAGTCGAAGCTAG
CCGTAGGGGAAGAATATGCCCTGTATTCACTGCCAAAACTGGATATCATC
TGTTTGCCGCAGGTGCACGGCTTGGGAATGGAGGGCTGGGGGGCGATTAC
CATCTTAAAAGACTACCTCCTCGTCTCTCCCACCACTAGATGGCATGGGA
GTTATCGCGCTCACACTTCGCCCTCATCCACGAAACTCGTGTCCTGTCCC
TTCATCAGGGCCATACGCTGCCGCCGCGGGTGTGTTATGGTTTTCGATGT
GCCTTGAGGATATTGAGCAAAACCTCCTGCCCCCTCGTGCTTTTTTTGTT
CCTGCTCCAGCTTCAGAGACGAGCTTCCATGCACCACGAGTGGGACGAGC
AAGGCCTCTTGCCAAGTGACGTTGTCGCACCACTTGCCTACGATGTGCAC
CTGGCGCTCGCGGGACCTCCCGATTTGGCCACAAAGGGAATGGTCGATGT
CACTATCGTGGTAAAGCGGCCCACGGCAGTCGTCCGGCTGCATTCAGTCG
GATTGAATATAAACTCAGCAAGCGTAGGGTTTCCAGATGGTACATTTACC
GCAACGGAAATATATTCTACCTCTCCGCAAATAGTCGCCATCGACATAAA
ATCACCCTTGTCGATTGGTCAGTACATCTTTAATGAATGTAAGGGACGTA
CATCTACCTTTCGGAGAGTCGAAGCTAGCCGTAGGGGAAGAATATGCCCT
GTATTCACTGCCAAAACTGGATATCATCTGTTTGCCGCAGGTGCACGGCT
TGGGAATGGAGGGCTGGGGGGCGATTACCATCTTAAAAGACTACCTCCTC
GTCTCTCCCACCACTAGATGGCATGGGAGTTATCGCGCTCACACTTCGCC
CTCATCCACGAAACTCGTGTCCTGTCCCTTCATCAGGGCCATACGCTGCC
GCCGCGGGTGTGTTATGGTTTTCGATGTGCCTTGAGGATATTGAGCAAAA
CCTCCTGCCCCCTCGTGCTTTTTTTGTTCCTGCTCCAGCTTCAGAGACGA
GCTTCCATGCACCACGAGTGGGACGAGCAAGGCCTCTTGCCAAGTGACGT
TGTCGCACCACTTGCCTACGATGTGCACCTGGCGCTCGCGGGACCTCCCG
ATTTGGCCACAAAGGGAATGGTCGATGTCACTATCGTGGTAAAGCGGCCC
ACGGCAGTCGTCCGGCTGCATTCAGTCGGATTGAATATAAACTCAGCAAG
CGTAGGGTTTCCAGATGGTACATTTACCGCAACGGAAATATATTCTACCT
CTCCGCAAATAGTCGCCATCGACATAAAATCACCCTTGTCGATTGGTCAG
TACATC
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Synonyms
Publications